RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 MARCH6O60337 910 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 ADORA2AP29274 412 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 SEMA3FQ13275 785 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 CCDC73Q6ZRK6 1079 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.99■□□□□ 0.31
SREK1-209ENST00000520953 ERCC4Q92889 916 aaPredicted RBP16.99■□□□□ 0.31
SREK1-209ENST00000520953 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 KCNH7Q9NS40 1196 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 KCNH3Q9ULD8 1083 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 HTTP42858 3142 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 FAM237AA0A1B0GTK4 181 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 ATP9AO75110 1047 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 COPB2P35606 906 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 KARSQ15046 597 aaKnown RBP16.99■□□□□ 0.31
SREK1-209ENST00000520953 ZRSR1Q15695 479 aaKnown RBP16.99■□□□□ 0.31
SREK1-209ENST00000520953 EEPD1Q7L9B9 569 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 IGSF22Q8N9C0 903 aa16.99■□□□□ 0.31
SREK1-209ENST00000520953 NAP1L4Q99733 375 aaKnown RBP16.99■□□□□ 0.31
SREK1-209ENST00000520953 MMTAG2Q9BU76 263 aaKnown RBP16.99■□□□□ 0.31
SREK1-209ENST00000520953 LRRC37A2A6NM11 1700 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 POLR2DO15514 142 aaKnown RBP16.98■□□□□ 0.31
SREK1-209ENST00000520953 ZNF202O95125 648 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 CCND2P30279 289 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 LONP1P36776 959 aaKnown RBP16.98■□□□□ 0.31
SREK1-209ENST00000520953 FXR2P51116 673 aaKnown RBP eCLIP16.98■□□□□ 0.315e-7■■□□□ 12.1
SREK1-209ENST00000520953 CAP1Q01518 475 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 SPIRE1Q08AE8 756 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 ITGB3BPQ13352 177 aaPredicted RBP16.98■□□□□ 0.31
SREK1-209ENST00000520953 LONRF3Q496Y0 759 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 JADE2Q9NQC1 790 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 VAV3Q9UKW4 847 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 PCDHA12Q9UN75 941 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 TELO2Q9Y4R8 837 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 KIAA1217Q5T5P2 1943 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 DDX39AO00148 427 aaKnown RBP16.98■□□□□ 0.31
SREK1-209ENST00000520953 CA12O43570 354 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 SORBS3O60504 671 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 SYKP43405 635 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 SLC5A5Q92911 643 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 ZNF577Q9BSK1 485 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 ARHGAP39Q9C0H5 1083 aa16.98■□□□□ 0.31
SREK1-209ENST00000520953 FOXN1O15353 648 aa16.97■□□□□ 0.31
SREK1-209ENST00000520953 MTMR1Q13613 665 aa16.97■□□□□ 0.31
SREK1-209ENST00000520953 DNERQ8NFT8 737 aa16.97■□□□□ 0.31
SREK1-209ENST00000520953 AGO4Q9HCK5 861 aaKnown RBP16.97■□□□□ 0.31
SREK1-209ENST00000520953 DOCK5Q9H7D0 1870 aa16.97■□□□□ 0.31
SREK1-209ENST00000520953 PLXNA1Q9UIW2 1896 aa16.97■□□□□ 0.31
SREK1-209ENST00000520953 EML1O00423 815 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 CHMP2AO43633 222 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 EDNRBP24530 442 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 ECM1Q16610 540 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 PLEKHH3Q7Z736 793 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 GRAMD1CQ8IYS0 662 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 DHX58Q96C10 678 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 FAM13BQ9NYF5 915 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 LRWD1Q9UFC0 647 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 A0A087WWV3 80 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 IPO5O00410 1097 aaKnown RBP16.96■□□□□ 0.31
SREK1-209ENST00000520953 PSMD10O75832 226 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 PTGS1P23219 599 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 GRB14Q14449 540 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 ZNF792Q3KQV3 632 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 LRCH2Q5VUJ6 765 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 INPP4AQ96PE3 977 aaPredicted RBP16.96■□□□□ 0.31
SREK1-209ENST00000520953 CLSTN2Q9H4D0 955 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 SERTAD1Q9UHV2 236 aa16.96■□□□□ 0.31
SREK1-209ENST00000520953 DHX15O43143 795 aaKnown RBP16.95■□□□□ 0.3
SREK1-209ENST00000520953 SETQ01105 290 aaPredicted RBP16.95■□□□□ 0.3
SREK1-209ENST00000520953 SP2Q02086 613 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 TMEM63BQ5T3F8 832 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 CCDC183Q5T5S1 534 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 NCAPH2Q6IBW4 605 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 SEPT14Q6ZU15 432 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 CKAP2LQ8IYA6 745 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 NPLOC4Q8TAT6 608 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 IVNS1ABPQ9Y6Y0 642 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 TBX3O15119 743 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 ACTN4O43707 911 aaKnown RBP16.95■□□□□ 0.3
SREK1-209ENST00000520953 KINO60870 393 aaKnown RBP16.95■□□□□ 0.3
SREK1-209ENST00000520953 MAPK4P31152 587 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 TMEM266Q2M3C6 531 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 OTOP1Q7RTM1 612 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 CABP7Q86V35 215 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 SLFN12Q8IYM2 578 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 FAM20AQ96MK3 541 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 PNMA5Q96PV4 448 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 IWS1Q96ST2 819 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 NUP62CLQ9H1M0 184 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 UNC45AQ9H3U1 944 aa16.95■□□□□ 0.3
SREK1-209ENST00000520953 ADD3Q9UEY8 706 aaKnown RBP16.95■□□□□ 0.3
SREK1-209ENST00000520953 TRPA1O75762 1119 aa16.94■□□□□ 0.3
SREK1-209ENST00000520953 CASP1P29466 404 aa16.94■□□□□ 0.3
SREK1-209ENST00000520953 UBA7P41226 1012 aa16.94■□□□□ 0.3
SREK1-209ENST00000520953 PDE4DQ08499 809 aa16.94■□□□□ 0.3
SREK1-209ENST00000520953 CCDC173Q0VFZ6 552 aa16.94■□□□□ 0.3
SREK1-209ENST00000520953 STXBP2Q15833 593 aa16.94■□□□□ 0.3
SREK1-209ENST00000520953 E2F4Q16254 413 aa16.94■□□□□ 0.3
SREK1-209ENST00000520953 NAALADL2Q58DX5 795 aa16.94■□□□□ 0.3
SREK1-209ENST00000520953 FBXO16Q8IX29 292 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms