RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 GPKOWQ92917 476 aaPredicted RBP eCLIP18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 CCDC136Q96JN2 1154 aa18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 PRDM12Q9H4Q4 367 aa18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 HDAC6Q9UBN7 1215 aa18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 KIAA1217Q5T5P2 1943 aa18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 IQCF3P0C7M6 154 aa18.6■□□□□ 0.57
IGHV3-42-201ENST00000520410 IGFBP4P22692 258 aa18.6■□□□□ 0.57
IGHV3-42-201ENST00000520410 GHRHRQ02643 423 aa18.6■□□□□ 0.57
IGHV3-42-201ENST00000520410 CELF3Q5SZQ8 465 aaKnown RBP18.6■□□□□ 0.57
IGHV3-42-201ENST00000520410 PPP2R2DQ66LE6 453 aa18.6■□□□□ 0.57
IGHV3-42-201ENST00000520410 USP17L6PQ6QN14 398 aa18.6■□□□□ 0.57
IGHV3-42-201ENST00000520410 HEATR3Q7Z4Q2 680 aa18.6■□□□□ 0.57
IGHV3-42-201ENST00000520410 KAT2BQ92831 832 aa18.6■□□□□ 0.57
IGHV3-42-201ENST00000520410 MAP3K14Q99558 947 aa18.6■□□□□ 0.57
IGHV3-42-201ENST00000520410 MTA3Q9BTC8 594 aa18.6■□□□□ 0.57
IGHV3-42-201ENST00000520410 PITPNM1O00562 1244 aa18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 RGS20O76081 388 aa18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 KCNJ6P48051 423 aa18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 NECTIN1Q15223 517 aa18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 HSDL1Q3SXM5 330 aa18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 MYSM1Q5VVJ2 828 aa18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 SRBD1Q8N5C6 995 aaKnown RBP18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 CAGE1Q8TC20 777 aa18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 EMID1Q96A84 441 aaPredicted RBP18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 TCEANC2Q96MN5 208 aa18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 NEK1Q96PY6 1258 aa18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 GTF2IRD1Q9UHL9 959 aa18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 SCN10AQ9Y5Y9 1956 aa18.59■□□□□ 0.57
IGHV3-42-201ENST00000520410 LIFRP42702 1097 aa18.58■□□□□ 0.56
IGHV3-42-201ENST00000520410 LRRC8DQ7L1W4 858 aa18.58■□□□□ 0.56
IGHV3-42-201ENST00000520410 NLRX1Q86UT6 975 aa18.58■□□□□ 0.56
IGHV3-42-201ENST00000520410 MICALL1Q8N3F8 863 aa18.58■□□□□ 0.56
IGHV3-42-201ENST00000520410 AFAP1L1Q8TED9 768 aa18.58■□□□□ 0.56
IGHV3-42-201ENST00000520410 YBX2Q9Y2T7 364 aaKnown RBP18.58■□□□□ 0.56
IGHV3-42-201ENST00000520410 TANC1Q9C0D5 1861 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 SPDYE3A6NKU9 549 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 FIBPO43427 364 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 STAM2O75886 525 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 F2P00734 622 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 TGFB3P10600 412 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 MYOGP15173 224 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 SELPP16109 830 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 SP2Q02086 613 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 COL9A3Q14050 684 aaPredicted RBP18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 NEDD9Q14511 834 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 UBE2SQ16763 222 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 UTP14CQ5TAP6 766 aaKnown RBP18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 CYFIP1Q7L576 1253 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 PSTPIP2Q9H939 334 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 PKD2L1Q9P0L9 805 aa18.57■□□□□ 0.56
IGHV3-42-201ENST00000520410 PPFIA4O75335 1185 aa18.56■□□□□ 0.56
IGHV3-42-201ENST00000520410 ZNF200P98182 395 aaPredicted RBP18.56■□□□□ 0.56
IGHV3-42-201ENST00000520410 CCDC85BQ15834 202 aaPredicted RBP18.56■□□□□ 0.56
IGHV3-42-201ENST00000520410 TMTC3Q6ZXV5 915 aa18.56■□□□□ 0.56
IGHV3-42-201ENST00000520410 SESTD1Q86VW0 696 aa18.56■□□□□ 0.56
IGHV3-42-201ENST00000520410 FANCBQ8NB91 859 aa18.56■□□□□ 0.56
IGHV3-42-201ENST00000520410 SLC9A7Q96T83 725 aa18.56■□□□□ 0.56
IGHV3-42-201ENST00000520410 EHMT1Q9H9B1 1298 aa18.56■□□□□ 0.56
IGHV3-42-201ENST00000520410 SCN5AQ14524 2016 aa18.56■□□□□ 0.56
IGHV3-42-201ENST00000520410 C17orf102A2RUQ5 167 aa18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 GOLGA8AA7E2F4 631 aa18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 GOLGA8BA8MQT2 603 aa18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 KIF28PB7ZC32 967 aa18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 LGALS2P05162 132 aa18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 SMARCA1P28370 1054 aa18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 MRPS9P82933 396 aaKnown RBP18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 PTK7Q13308 1070 aa18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 RTN1Q16799 776 aa18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 DHX38Q92620 1227 aaKnown RBP18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 ZBED2Q9BTP6 218 aa18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 CERS4Q9HA82 394 aa18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 RBM28Q9NW13 759 aaKnown RBP18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 PCDHA11Q9Y5I1 949 aa18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 BAZ2BQ9UIF8 2168 aaKnown RBP18.55■□□□□ 0.56
IGHV3-42-201ENST00000520410 KLF18A0A0U1RQI7 1052 aa18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 H3BRB1 525 aa18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 ZBTB43O43298 467 aa18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 CA3P07451 260 aa18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 CKBP12277 381 aa18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 THPOP40225 353 aa18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 NAPAP54920 295 aa18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 KRT32Q14532 448 aa18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 PCNX4Q63HM2 1172 aa18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 ATP6V0A1Q93050 837 aa18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 INPP4AQ96PE3 977 aaPredicted RBP18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 TUT1Q9H6E5 874 aaKnown RBP18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 BCAS3Q9H6U6 928 aa18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 ZNF215Q9UL58 517 aaPredicted RBP18.54■□□□□ 0.56
IGHV3-42-201ENST00000520410 FRMPD4Q14CM0 1322 aa18.53■□□□□ 0.56
IGHV3-42-201ENST00000520410 MYH7BA7E2Y1 1941 aa18.53■□□□□ 0.56
IGHV3-42-201ENST00000520410 MEIS2O14770 477 aa18.53■□□□□ 0.56
IGHV3-42-201ENST00000520410 NEFLP07196 543 aa18.53■□□□□ 0.56
IGHV3-42-201ENST00000520410 APOA5Q6Q788 366 aa18.53■□□□□ 0.56
IGHV3-42-201ENST00000520410 METTL7BQ6UX53 244 aa18.53■□□□□ 0.56
IGHV3-42-201ENST00000520410 DHX32Q7L7V1 743 aaKnown RBP18.53■□□□□ 0.56
IGHV3-42-201ENST00000520410 TRIM50Q86XT4 487 aa18.53■□□□□ 0.56
IGHV3-42-201ENST00000520410 GBF1Q92538 1859 aa18.53■□□□□ 0.56
IGHV3-42-201ENST00000520410 SPATA31C2B4DYI2 1134 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 HAS3O00219 553 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 PIK3CDO00329 1044 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms