RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 SPRED2Q7Z698 418 aa13.71□□□□□ -0.21
POLB-208ENST00000520008 VSIG10LQ86VR7 867 aa13.71□□□□□ -0.21
POLB-208ENST00000520008 IL31RAQ8NI17 732 aa13.71□□□□□ -0.21
POLB-208ENST00000520008 WNT8BQ93098 351 aa13.71□□□□□ -0.21
POLB-208ENST00000520008 FTOQ9C0B1 505 aaKnown RBP eCLIP13.71□□□□□ -0.21
POLB-208ENST00000520008 PCDHA1Q9Y5I3 950 aa13.71□□□□□ -0.21
POLB-208ENST00000520008 FRMPD4Q14CM0 1322 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 NCOR1O75376 2440 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 LPXNO60711 386 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 UBA1P22314 1058 aaKnown RBP13.7□□□□□ -0.22
POLB-208ENST00000520008 HOXC8P31273 242 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 CHMP4BP1P59074 171 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 TROAPQ12815 778 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 PTK7Q13308 1070 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
POLB-208ENST00000520008 HIC1Q14526 733 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 MBTPS1Q14703 1052 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 KIAA0753Q2KHM9 967 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 CNKSR3Q6P9H4 555 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 C7orf31Q8N865 590 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 CERS4Q9HA82 394 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 SENP2Q9HC62 589 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 TAF6LQ9Y6J9 622 aa13.7□□□□□ -0.22
POLB-208ENST00000520008 SIP14410 1827 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 LCHNA4D1U4 455 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 PPFIA4O75335 1185 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 BMP1P13497 986 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 HOXA13P31271 388 aaPredicted RBP13.69□□□□□ -0.22
POLB-208ENST00000520008 DEFB103AP81534 67 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 SP2Q02086 613 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 TFF2Q03403 129 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 PTH1RQ03431 593 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 CELF3Q5SZQ8 465 aaKnown RBP13.69□□□□□ -0.22
POLB-208ENST00000520008 KRT40Q6A162 431 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 KCNV1Q6PIU1 500 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 TMCO2Q7Z6W1 182 aaPredicted RBP13.69□□□□□ -0.22
POLB-208ENST00000520008 DHX37Q8IY37 1157 aaKnown RBP13.69□□□□□ -0.22
POLB-208ENST00000520008 GPKOWQ92917 476 aaPredicted RBP eCLIP13.69□□□□□ -0.222e-6■■■■□ 21.7
POLB-208ENST00000520008 PIGSQ96S52 555 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 UHRF1Q96T88 793 aaPredicted RBP13.69□□□□□ -0.22
POLB-208ENST00000520008 C16orf70Q9BSU1 422 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 ALG1Q9BT22 464 aa13.69□□□□□ -0.22
POLB-208ENST00000520008 MICAL3Q7RTP6 2002 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 KIF28PB7ZC32 967 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 RBAK-RBAKDNI3L0D1 243 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 TLL1O43897 1013 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 GJB5O95377 273 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 GGPS1O95749 300 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 TGFB3P10600 412 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 MYCLP12524 364 aaPredicted RBP13.68□□□□□ -0.22
POLB-208ENST00000520008 CHMLP26374 656 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 KCNJ6P48051 423 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 GRB10Q13322 594 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 ZNF618Q5T7W0 954 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 HOMER1Q86YM7 354 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 MICALL1Q8N3F8 863 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 ARNTL2Q8WYA1 636 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 YTHDC1Q96MU7 727 aaKnown RBP13.68□□□□□ -0.22
POLB-208ENST00000520008 TSPYL2Q9H2G4 693 aaPredicted RBP13.68□□□□□ -0.22
POLB-208ENST00000520008 COL4A6Q14031 1691 aa13.68□□□□□ -0.22
POLB-208ENST00000520008 BAZ2BQ9UIF8 2168 aaKnown RBP13.67□□□□□ -0.22
POLB-208ENST00000520008 ABHD14A-ACY1A0A1B0GW23 586 aa13.67□□□□□ -0.22
POLB-208ENST00000520008 E7EWF7 191 aa13.67□□□□□ -0.22
POLB-208ENST00000520008 GTPBP6O43824 516 aaPredicted RBP13.67□□□□□ -0.22
POLB-208ENST00000520008 KCNQ1P51787 676 aa13.67□□□□□ -0.22
POLB-208ENST00000520008 ANTXR2P58335 489 aa13.67□□□□□ -0.22
POLB-208ENST00000520008 MRPS9P82933 396 aaKnown RBP13.67□□□□□ -0.22
POLB-208ENST00000520008 ZNF200P98182 395 aaPredicted RBP13.67□□□□□ -0.22
POLB-208ENST00000520008 TRDNQ13061 729 aa13.67□□□□□ -0.22
POLB-208ENST00000520008 TRAF1Q13077 416 aa13.67□□□□□ -0.22
POLB-208ENST00000520008 SERINC5Q86VE9 423 aa13.67□□□□□ -0.22
POLB-208ENST00000520008 SPATA33Q96N06 139 aa13.67□□□□□ -0.22
POLB-208ENST00000520008 INPP4AQ96PE3 977 aaPredicted RBP13.67□□□□□ -0.22
POLB-208ENST00000520008 DOCK5Q9H7D0 1870 aa13.67□□□□□ -0.22
POLB-208ENST00000520008 TCF20Q9UGU0 1960 aaKnown RBP13.66□□□□□ -0.22
POLB-208ENST00000520008 PNMA6FA0A0J9YX94 578 aa13.66□□□□□ -0.22
POLB-208ENST00000520008 GCOM1H8Y6P7 765 aaPredicted RBP13.66□□□□□ -0.22
POLB-208ENST00000520008 IFIT3O14879 490 aaKnown RBP13.66□□□□□ -0.22
POLB-208ENST00000520008 SGSM2O43147 1006 aa13.66□□□□□ -0.22
POLB-208ENST00000520008 EFCAB14O75071 495 aa13.66□□□□□ -0.22
POLB-208ENST00000520008 POLR2MP0CAP2 368 aa13.66□□□□□ -0.22
POLB-208ENST00000520008 CCND2P30279 289 aa13.66□□□□□ -0.22
POLB-208ENST00000520008 ICAM3P32942 547 aa13.66□□□□□ -0.22
POLB-208ENST00000520008 MB21D2Q8IYB1 491 aaPredicted RBP13.66□□□□□ -0.22
POLB-208ENST00000520008 NCOA7Q8NI08 942 aa13.66□□□□□ -0.22
POLB-208ENST00000520008 ZFP91Q96JP5 570 aaPredicted RBP13.66□□□□□ -0.22
POLB-208ENST00000520008 NECAB3Q96P71 396 aaPredicted RBP13.66□□□□□ -0.22
POLB-208ENST00000520008 BCAS3Q9H6U6 928 aa13.66□□□□□ -0.22
POLB-208ENST00000520008 EMSYQ7Z589 1322 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 SORBS3O60504 671 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 LGR5O75473 907 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 STAM2O75886 525 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 LGALS2P05162 132 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 SEMA3FQ13275 785 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 WTAPQ15007 396 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 AAK1Q2M2I8 961 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 IGDCC4Q8TDY8 1250 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 RUFY2Q8WXA3 655 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 MAP4K1Q92918 833 aa13.65□□□□□ -0.22
POLB-208ENST00000520008 MAP3K14Q99558 947 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms