RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 NECTIN1Q15223 517 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 ADCK5Q3MIX3 580 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 IQSEC1Q6DN90 963 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 STK11IPQ8N1F8 1099 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 PHOSPHO2Q8TCD6 241 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 TTC14Q96N46 770 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 PUS7LQ9H0K6 701 aaKnown RBP8.59□□□□□ -1.03
PVT1-206ENST00000517838 A1CFQ9NQ94 594 aaKnown RBP8.59□□□□□ -1.03
PVT1-206ENST00000517838 Q9Y3F1 56 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 CTDP1Q9Y5B0 961 aaPredicted RBP8.59□□□□□ -1.03
PVT1-206ENST00000517838 PLXNA1Q9UIW2 1896 aa8.59□□□□□ -1.03
PVT1-206ENST00000517838 MYO5AQ9Y4I1 1855 aaKnown RBP8.59□□□□□ -1.03
PVT1-206ENST00000517838 VPS37CA5D8V6 355 aaPredicted RBP8.58□□□□□ -1.04
PVT1-206ENST00000517838 IQCF3P0C7M6 154 aa8.58□□□□□ -1.04
PVT1-206ENST00000517838 SUPT20HL2P0C7V6 817 aa8.58□□□□□ -1.04
PVT1-206ENST00000517838 UBE3CQ15386 1083 aa8.58□□□□□ -1.04
PVT1-206ENST00000517838 FOXD4L6Q3SYB3 417 aaPredicted RBP8.58□□□□□ -1.04
PVT1-206ENST00000517838 SBK1Q52WX2 424 aa8.58□□□□□ -1.04
PVT1-206ENST00000517838 ZMYM1Q5SVZ6 1142 aa8.58□□□□□ -1.04
PVT1-206ENST00000517838 FOXD4L3Q6VB84 417 aaPredicted RBP8.58□□□□□ -1.04
PVT1-206ENST00000517838 EEPD1Q7L9B9 569 aa8.58□□□□□ -1.04
PVT1-206ENST00000517838 HERC6Q8IVU3 1022 aa8.58□□□□□ -1.04
PVT1-206ENST00000517838 FBXO16Q8IX29 292 aaPredicted RBP8.58□□□□□ -1.04
PVT1-206ENST00000517838 KCNB2Q92953 911 aa8.58□□□□□ -1.04
PVT1-206ENST00000517838 STRBPQ96SI9 672 aaKnown RBP8.58□□□□□ -1.04
PVT1-206ENST00000517838 SEC62Q99442 399 aaKnown RBP8.58□□□□□ -1.04
PVT1-206ENST00000517838 ACAD9Q9H845 621 aa8.58□□□□□ -1.04
PVT1-206ENST00000517838 MKNK2Q9HBH9 465 aa8.58□□□□□ -1.04
PVT1-206ENST00000517838 TNKSO95271 1327 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.57□□□□□ -1.04
PVT1-206ENST00000517838 GSG1L2A8MUP6 293 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 PRR33A8MZF0 331 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 M0R2C6 588 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 PRPF40AO75400 957 aaKnown RBP8.57□□□□□ -1.04
PVT1-206ENST00000517838 BRD1O95696 1058 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 BMP3P12645 472 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 ACTN1P12814 892 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 GJB2P29033 226 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 PURAQ00577 322 aaKnown RBP8.57□□□□□ -1.04
PVT1-206ENST00000517838 STK3Q13188 491 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 CSPP1Q1MSJ5 1256 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 TICAM2Q86XR7 235 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 LRRC47Q8N1G4 583 aaKnown RBP8.57□□□□□ -1.04
PVT1-206ENST00000517838 NECAB1Q8N987 351 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 GMCL1P1Q8NEA9 526 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 PPP1R13LQ8WUF5 828 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 APPBP2Q92624 585 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 CEP95Q96GE4 821 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 TCEANC2Q96MN5 208 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 TRERF1Q96PN7 1200 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 NEK1Q96PY6 1258 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 PURBQ96QR8 312 aaKnown RBP8.57□□□□□ -1.04
PVT1-206ENST00000517838 SLC9A7Q96T83 725 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 DSCC1Q9BVC3 393 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 RNF146Q9NTX7 359 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 MTMR4Q9NYA4 1195 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 CYP39A1Q9NYL5 469 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 ARPP21Q9UBL0 812 aaPredicted RBP8.57□□□□□ -1.04
PVT1-206ENST00000517838 CTNNA3Q9UI47 895 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 ATP6V1DQ9Y5K8 247 aa8.57□□□□□ -1.04
PVT1-206ENST00000517838 PRRC2BQ5JSZ5 2229 aaKnown RBP8.57□□□□□ -1.04
PVT1-206ENST00000517838 MUC6Q6W4X9 2439 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 LCHNA4D1U4 455 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 MINDY4BA8MYZ0 360 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 KIF28PB7ZC32 967 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 TMEM232C9JQI7 657 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 PRDM1O75626 825 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 LARGE1O95461 756 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 MBD3O95983 291 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 HMGB1P09429 215 aaKnown RBP8.56□□□□□ -1.04
PVT1-206ENST00000517838 FDX1P10109 184 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 PDCP20941 246 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 RFC2P35250 354 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 MRE11P49959 708 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 SNAP25P60880 206 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 GPNMBQ14956 572 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 IMMTQ16891 758 aaKnown RBP8.56□□□□□ -1.04
PVT1-206ENST00000517838 NBPF20Q3BBV1 942 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 DUSP28Q4G0W2 176 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 MUM1L1Q5H9M0 696 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 SLFN13Q68D06 897 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 CAVIN1Q6NZI2 390 aaKnown RBP8.56□□□□□ -1.04
PVT1-206ENST00000517838 CLEC17AQ6ZS10 378 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 TMCO2Q7Z6W1 182 aaPredicted RBP8.56□□□□□ -1.04
PVT1-206ENST00000517838 RALYLQ86SE5 291 aaKnown RBP8.56□□□□□ -1.04
PVT1-206ENST00000517838 FAM178BQ8IXR5 827 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 GJD3Q8N144 294 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.56□□□□□ -1.04
PVT1-206ENST00000517838 MORC4Q8TE76 937 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 SYAP1Q96A49 352 aaPredicted RBP8.56□□□□□ -1.04
PVT1-206ENST00000517838 MTRQ99707 1265 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 PRR14Q9BWN1 585 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 FTOQ9C0B1 505 aaKnown RBP eCLIP8.56□□□□□ -1.04
PVT1-206ENST00000517838 LMCD1Q9NZU5 365 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 SYNPO2Q9UMS6 1093 aa8.56□□□□□ -1.04
PVT1-206ENST00000517838 TCF20Q9UGU0 1960 aaKnown RBP8.55□□□□□ -1.04
PVT1-206ENST00000517838 RBAK-RBAKDNI3L0D1 243 aa8.55□□□□□ -1.04
PVT1-206ENST00000517838 ACTN4O43707 911 aaKnown RBP8.55□□□□□ -1.04
PVT1-206ENST00000517838 STX6O43752 255 aa8.55□□□□□ -1.04
PVT1-206ENST00000517838 TTLL1O95922 423 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms