RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 SORBS3O60504 671 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 GGPS1O95749 300 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 ATP2A2P16615 1042 aaKnown RBP15.05■□□□□ -0
HMGCS1-205ENST00000508319 CCND2P30279 289 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 PSEN2P49810 448 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 SP2Q02086 613 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 RBL2Q08999 1139 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 HSDL1Q3SXM5 330 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 CELF3Q5SZQ8 465 aaKnown RBP15.05■□□□□ -0
HMGCS1-205ENST00000508319 KCNV1Q6PIU1 500 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 CASC1Q6TDU7 716 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 DHX37Q8IY37 1157 aaKnown RBP15.05■□□□□ -0
HMGCS1-205ENST00000508319 CTCFLQ8NI51 663 aaPredicted RBP15.05■□□□□ -0
HMGCS1-205ENST00000508319 CAGE1Q8TC20 777 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 PIBF1Q8WXW3 757 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 ZFP91Q96JP5 570 aaPredicted RBP15.05■□□□□ -0
HMGCS1-205ENST00000508319 KATNAL1Q9BW62 490 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 PCDHA11Q9Y5I1 949 aa15.05■□□□□ -0
HMGCS1-205ENST00000508319 SLC27A2O14975 620 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 MYOGP15173 224 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 KIF5BP33176 963 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 MCM5P33992 734 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 ADGRE1Q14246 886 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 MFSD10Q14728 455 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 KIAA0753Q2KHM9 967 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 SKAP1Q86WV1 359 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 CCDC155Q8N6L0 562 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 RETREG2Q8NC44 543 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 AFAP1L1Q8TED9 768 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 GAS2L1Q99501 681 aaPredicted RBP15.04■□□□□ -0
HMGCS1-205ENST00000508319 SLC28A3Q9HAS3 691 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 HDAC6Q9UBN7 1215 aa15.04■□□□□ -0
HMGCS1-205ENST00000508319 PLEKHA8P1O95397 391 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 TGFB3P10600 412 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 ACTN1P12814 892 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 MRPS9P82933 396 aaKnown RBP15.03■□□□□ -0
HMGCS1-205ENST00000508319 GPNMBQ14956 572 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 NECTIN1Q15223 517 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 PPP2R2DQ66LE6 453 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 CREB3L3Q68CJ9 461 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 C7orf31Q8N865 590 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 TMEM87BQ96K49 555 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 SPATA33Q96N06 139 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 INPP4AQ96PE3 977 aaPredicted RBP15.03■□□□□ -0
HMGCS1-205ENST00000508319 SLC9A7Q96T83 725 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 ALG1Q9BT22 464 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 ANO2Q9NQ90 1003 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 XIRP2A4UGR9 3374 aa15.03■□□□□ -0
HMGCS1-205ENST00000508319 PPFIA4O75335 1185 aa15.02■□□□□ -0
HMGCS1-205ENST00000508319 SELPP16109 830 aa15.02■□□□□ -0
HMGCS1-205ENST00000508319 RXRAP19793 462 aa15.02■□□□□ -0
HMGCS1-205ENST00000508319 SMARCA1P28370 1054 aa15.02■□□□□ -0
HMGCS1-205ENST00000508319 LIFRP42702 1097 aa15.02■□□□□ -0
HMGCS1-205ENST00000508319 SEMA3FQ13275 785 aa15.02■□□□□ -0
HMGCS1-205ENST00000508319 HIC1Q14526 733 aa15.02■□□□□ -0
HMGCS1-205ENST00000508319 BMP2KLQ5H9B9 411 aa15.02■□□□□ -0
HMGCS1-205ENST00000508319 LRRC8DQ7L1W4 858 aa15.02■□□□□ -0
HMGCS1-205ENST00000508319 SRBD1Q8N5C6 995 aaKnown RBP15.02■□□□□ -0
HMGCS1-205ENST00000508319 WNT8BQ93098 351 aa15.02■□□□□ -0
HMGCS1-205ENST00000508319 RRP36Q96EU6 259 aaKnown RBP15.02■□□□□ -0
HMGCS1-205ENST00000508319 C16orf70Q9BSU1 422 aa15.02■□□□□ -0
HMGCS1-205ENST00000508319 FTOQ9C0B1 505 aaKnown RBP eCLIP15.02■□□□□ -0
HMGCS1-205ENST00000508319 BCAS3Q9H6U6 928 aa15.02■□□□□ -0
HMGCS1-205ENST00000508319 CCDC69A6NI79 296 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 PIK3CDO00329 1044 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 MEIS2O14770 477 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 STAM2O75886 525 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 BAIAP3O94812 1187 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 CXCL10P02778 98 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 CA3P07451 260 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 CKBP12277 381 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 ICAM3P32942 547 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 ZNF200P98182 395 aaPredicted RBP15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 TRIM71Q2Q1W2 868 aaKnown RBP15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 GNPTABQ3T906 1256 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 TRAF7Q6Q0C0 670 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 USP17L6PQ6QN14 398 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 NFXL1Q6ZNB6 911 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 CMTR1Q8N1G2 835 aaKnown RBP15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 LZTS2Q9BRK4 669 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 LRRC2Q9BYS8 371 aa15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 SEC63Q9UGP8 760 aaKnown RBP15.01□□□□□ -0.01
HMGCS1-205ENST00000508319 PRRC2BQ5JSZ5 2229 aaKnown RBP15□□□□□ -0.01
HMGCS1-205ENST00000508319 SPATA31C2B4DYI2 1134 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 RBAK-RBAKDNI3L0D1 243 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 NBNO60934 754 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 LGALS2P05162 132 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 HOXC8P31273 242 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 GNAQP50148 359 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 PTK7Q13308 1070 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 METTL7BQ6UX53 244 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 CENPQQ7L2Z9 268 aaPredicted RBP15□□□□□ -0.01
HMGCS1-205ENST00000508319 RAB11FIP4Q86YS3 637 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 TMTC2Q8N394 836 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 PHOSPHO2Q8TCD6 241 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 MLXIPQ9HAP2 919 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 PRDM6Q9NQX0 595 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 COL4A4P53420 1690 aaPredicted RBP15□□□□□ -0.01
HMGCS1-205ENST00000508319 NCOR1O75376 2440 aa15□□□□□ -0.01
HMGCS1-205ENST00000508319 MICAL3Q7RTP6 2002 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms