RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 FANCBQ8NB91 859 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 RETREG2Q8NC44 543 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 RRP36Q96EU6 259 aaKnown RBP16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 SPATA33Q96N06 139 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 ALG1Q9BT22 464 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 TELO2Q9Y4R8 837 aa16.63■□□□□ 0.25
CDC42SE2-209ENST00000506419 SPATA31C2B4DYI2 1134 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 PITPNM1O00562 1244 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 F2P00734 622 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 ZNF286BP0CG31 522 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 MYOGP15173 224 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 ICAM3P32942 547 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 GNAQP50148 359 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 MFSD10Q14728 455 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 KIAA0753Q2KHM9 967 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 ADCK5Q3MIX3 580 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 MAFAQ8NHW3 353 aaPredicted RBP16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 NKX2-4Q9H2Z4 354 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 GTF2IRD1Q9UHL9 959 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 NOD1Q9Y239 953 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 SLC12A7Q9Y666 1083 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 SLC4A7Q9Y6M7 1214 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 FRMPD4Q14CM0 1322 aa16.62■□□□□ 0.25
CDC42SE2-209ENST00000506419 VCANP13611 3396 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 PIK3CDO00329 1044 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 FOSL2P15408 326 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 BFSP2Q13515 415 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 TSGA10IPQ3SY00 556 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 SGMS1Q86VZ5 419 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 C7orf31Q8N865 590 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 WNT8BQ93098 351 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 TCEANC2Q96MN5 208 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 INPP4AQ96PE3 977 aaPredicted RBP16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 NEK1Q96PY6 1258 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 C16orf70Q9BSU1 422 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 MTIF3Q9H2K0 278 aaKnown RBP16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 MSRAQ9UJ68 235 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 BRPF3Q9ULD4 1205 aa16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 SPTBN5Q9NRC6 3674 aaKnown RBP16.61■□□□□ 0.25
CDC42SE2-209ENST00000506419 ZBBXA8MT70 800 aa16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 PFKMP08237 780 aa16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 CALM1P0DP23 149 aa16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 CALM2P0DP24 149 aa16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 CALM3P0DP25 149 aa16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 RFC2P35250 354 aa16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 ADGRE1Q14246 886 aa16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 TRIM71Q2Q1W2 868 aaKnown RBP16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 TRAF7Q6Q0C0 670 aa16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 TMTC3Q6ZXV5 915 aa16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 PRDM12Q9H4Q4 367 aa16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 MLXIPQ9HAP2 919 aa16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 CHD7Q9P2D1 2997 aa16.6■□□□□ 0.25
CDC42SE2-209ENST00000506419 CKBP12277 381 aa16.59■□□□□ 0.25
CDC42SE2-209ENST00000506419 RAB30Q15771 203 aa16.59■□□□□ 0.25
CDC42SE2-209ENST00000506419 TCTN1Q2MV58 587 aa16.59■□□□□ 0.25
CDC42SE2-209ENST00000506419 CYFIP1Q7L576 1253 aa16.59■□□□□ 0.25
CDC42SE2-209ENST00000506419 DHX32Q7L7V1 743 aaKnown RBP16.59■□□□□ 0.25
CDC42SE2-209ENST00000506419 USP38Q8NB14 1042 aa16.59■□□□□ 0.25
CDC42SE2-209ENST00000506419 SMARCC2Q8TAQ2 1214 aa16.59■□□□□ 0.25
CDC42SE2-209ENST00000506419 FTOQ9C0B1 505 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDC42SE2-209ENST00000506419 PSTPIP2Q9H939 334 aa16.59■□□□□ 0.25
CDC42SE2-209ENST00000506419 SEC63Q9UGP8 760 aaKnown RBP16.59■□□□□ 0.25
CDC42SE2-209ENST00000506419 MYH6P13533 1939 aa16.58■□□□□ 0.25
CDC42SE2-209ENST00000506419 NBNO60934 754 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 ATP9AO75110 1047 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 CDC45O75419 566 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 STAM2O75886 525 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 SELPP16109 830 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 ATP2A2P16615 1042 aaKnown RBP16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 RBL2Q08999 1139 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 FUT2Q10981 343 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 UBE2SQ16763 222 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 RNF20Q5VTR2 975 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 PCNX4Q63HM2 1172 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 MICU3Q86XE3 530 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 CAGE1Q8TC20 777 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 AFAP1L1Q8TED9 768 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 KCNB2Q92953 911 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 CUL5Q93034 780 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 GPR20Q99678 358 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 KATNAL1Q9BW62 490 aa16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 FAM217BQ9NTX9 383 aaPredicted RBP16.58■□□□□ 0.24
CDC42SE2-209ENST00000506419 KIAA1217Q5T5P2 1943 aa16.57■□□□□ 0.24
CDC42SE2-209ENST00000506419 CPA1P15085 419 aa16.57■□□□□ 0.24
CDC42SE2-209ENST00000506419 PTK7Q13308 1070 aa16.57■□□□□ 0.24
CDC42SE2-209ENST00000506419 NEDD9Q14511 834 aa16.57■□□□□ 0.24
CDC42SE2-209ENST00000506419 GNPTABQ3T906 1256 aa16.57■□□□□ 0.24
CDC42SE2-209ENST00000506419 TYW1BQ6NUM6 668 aa16.57■□□□□ 0.24
CDC42SE2-209ENST00000506419 XRRA1Q6P2D8 792 aa16.57■□□□□ 0.24
CDC42SE2-209ENST00000506419 APOA5Q6Q788 366 aa16.57■□□□□ 0.24
CDC42SE2-209ENST00000506419 METTL7BQ6UX53 244 aa16.57■□□□□ 0.24
CDC42SE2-209ENST00000506419 LRRC8DQ7L1W4 858 aa16.57■□□□□ 0.24
CDC42SE2-209ENST00000506419 SLC28A3Q9HAS3 691 aa16.57■□□□□ 0.24
CDC42SE2-209ENST00000506419 PCDHA11Q9Y5I1 949 aa16.57■□□□□ 0.24
CDC42SE2-209ENST00000506419 H3BRB1 525 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 FIBPO43427 364 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 ARHGEF15O94989 841 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 CXCL10P02778 98 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 LGALS2P05162 132 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms