RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 ETNPPLQ8TBG4 499 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 HAS1Q92839 578 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 ZNF333Q96JL9 665 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 MTMR9Q96QG7 549 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 WDR11Q9BZH6 1224 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 FTOQ9C0B1 505 aaKnown RBP eCLIP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 ABHD16BQ9H3Z7 469 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 CWC22Q9HCG8 908 aaKnown RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 ADD3Q9UEY8 706 aaKnown RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 NRBP1Q9UHY1 535 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 RANBP2P49792 3224 aaKnown RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 ADAMTS4O75173 837 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 EIF3JO75822 258 aaKnown RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 STAM2O75886 525 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 F13A1P00488 732 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 HMGCRP04035 888 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 ARP10275 920 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 HOXD8P13378 290 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 CCND3P30281 292 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 GRK4P32298 578 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 FOSBP53539 338 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 ACVR2BQ13705 512 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 KIF22Q14807 665 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 PTPAQ15257 358 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 MTFR1Q15390 333 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 IL17AQ16552 155 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 CCDC144BQ3MJ40 725 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 Q4G0T1 1027 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 CEP55Q53EZ4 464 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 COL13A1Q5TAT6 717 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 WDR78Q5VTH9 848 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 MYSM1Q5VVJ2 828 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 MCTP2Q6DN12 878 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 XRRA1Q6P2D8 792 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 PIK3AP1Q6ZUJ8 805 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 NIPA1Q7RTP0 329 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 KRT25Q7Z3Z0 450 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 FERMT3Q86UX7 667 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 FBXO16Q8IX29 292 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 FAM184AQ8NB25 1140 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 BICD2Q8TD16 824 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 SH3TC2Q8TF17 1288 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 IPO9Q96P70 1041 aaKnown RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 MXRA8Q9BRK3 442 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 TMEM60Q9H2L4 133 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 JADE2Q9NQC1 790 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 KCNH7Q9NS40 1196 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 DDX41Q9UJV9 622 aaKnown RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 CTDP1Q9Y5B0 961 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 PCDHB6Q9Y5E3 794 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 MRVI1Q9Y6F6 885 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 MORC2Q9Y6X9 1032 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 ARID2Q68CP9 1835 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 LAMA2P24043 3122 aaKnown RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 LAMA3Q16787 3333 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 MYH9P35579 1960 aaKnown RBP5.63□□□□□ -1.51
LMNB1-208ENST00000504788 ASB14A6NK59 587 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 SPDYE3A6NKU9 549 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 MSH4O15457 936 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 SEPT4O43236 478 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 PSMD10O75832 226 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 INHAP05111 366 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 ZSCAN22P10073 491 aaPredicted RBP5.63□□□□□ -1.51
LMNB1-208ENST00000504788 SMPD1P17405 629 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 XBP1P17861 261 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 PDCP20941 246 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 UBA1P22314 1058 aaKnown RBP5.63□□□□□ -1.51
LMNB1-208ENST00000504788 HOXD10P28358 340 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 ADCYAP1R1P41586 468 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 TRAPPC10P48553 1259 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 ARHGAP1Q07960 439 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 BECN1Q14457 450 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 NONOQ15233 471 aaKnown RBP eCLIP5.63□□□□□ -1.519e-7■■□□□ 12.5
LMNB1-208ENST00000504788 STXBP2Q15833 593 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 PKN2Q16513 984 aaKnown RBP5.63□□□□□ -1.51
LMNB1-208ENST00000504788 DUSP28Q4G0W2 176 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 GJC2Q5T442 439 aaPredicted RBP5.63□□□□□ -1.51
LMNB1-208ENST00000504788 ARHGEF16Q5VV41 709 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 UBE2Q1Q7Z7E8 422 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 NEK8Q86SG6 692 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 SLC5A5Q92911 643 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 GJA10Q969M2 543 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 EMID1Q96A84 441 aaPredicted RBP5.63□□□□□ -1.51
LMNB1-208ENST00000504788 LENG1Q96BZ8 264 aaPredicted RBP5.63□□□□□ -1.51
LMNB1-208ENST00000504788 GPRASP2Q96D09 838 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 SENP7Q9BQF6 1050 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 MCOLN1Q9GZU1 580 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 CRISPLD2Q9H0B8 497 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 VTA1Q9NP79 307 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 VAV3Q9UKW4 847 aa5.63□□□□□ -1.51
LMNB1-208ENST00000504788 TRIP12Q14669 1992 aaPredicted RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 IGKV6D-21A0A0A0MT36 114 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 MYADML2A6NDP7 307 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 MAFGO15525 162 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 FARP2O94887 1054 aaPredicted RBP5.62□□□□□ -1.51
LMNB1-208ENST00000504788 ATG7O95352 703 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 CCNE2O96020 404 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 TGFB3P10600 412 aa5.62□□□□□ -1.51
LMNB1-208ENST00000504788 PDIA4P13667 645 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms