RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 EFCAB13Q8IY85 973 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 NOC3LQ8WTT2 800 aaKnown RBP18.17■□□□□ 0.5
COL6A1-206ENST00000498614 P2RX5Q93086 422 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 CCDC47Q96A33 483 aaKnown RBP18.17■□□□□ 0.5
COL6A1-206ENST00000498614 CNOT6LQ96LI5 555 aaKnown RBP18.17■□□□□ 0.5
COL6A1-206ENST00000498614 C7orf25Q9BPX7 421 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 LRRC1Q9BTT6 524 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 GPCPD1Q9NPB8 672 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 MTMR4Q9NYA4 1195 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 DMGDHQ9UI17 866 aaKnown RBP18.17■□□□□ 0.5
COL6A1-206ENST00000498614 SMARCA1P28370 1054 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 CCT5P48643 541 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 NOVP48745 357 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 MMGT1Q8N4V1 131 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 RETREG2Q8NC44 543 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 CNKSR1Q969H4 720 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 DRC1Q96MC2 740 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 CAPN6Q9Y6Q1 641 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 FOCADQ5VW36 1801 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 CCNE1P24864 410 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 MIIPQ5JXC2 388 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 IQCEQ6IPM2 695 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 CALML4Q96GE6 196 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 RABEP2Q9H5N1 569 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 MLXIPQ9HAP2 919 aa18.16■□□□□ 0.5
COL6A1-206ENST00000498614 SLC37A4O43826 429 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 TDP2O95551 362 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 MTIF2P46199 727 aaKnown RBP18.15■□□□□ 0.5
COL6A1-206ENST00000498614 CCDC96Q2M329 555 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 TMX4Q9H1E5 349 aaPredicted RBP18.15■□□□□ 0.5
COL6A1-206ENST00000498614 DDX4Q9NQI0 724 aaKnown RBP18.15■□□□□ 0.5
COL6A1-206ENST00000498614 JRKLQ9Y4A0 524 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 ESYT2A0FGR8 921 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 ADCY7P51828 1080 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 SLC7A5Q01650 507 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 CALCRLQ16602 461 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 TADA2BQ86TJ2 420 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 TTLL6Q8N841 843 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 NOC4LQ9BVI4 516 aaKnown RBP18.15■□□□□ 0.5
COL6A1-206ENST00000498614 MXD3Q9BW11 206 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 SLC39A2Q9NP94 309 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 SMARCAL1Q9NZC9 954 aa18.15■□□□□ 0.5
COL6A1-206ENST00000498614 BICDL2A1A5D9 508 aa18.14■□□□□ 0.49
COL6A1-206ENST00000498614 CPP00450 1065 aa18.14■□□□□ 0.49
COL6A1-206ENST00000498614 PPFIA1Q13136 1202 aa18.14■□□□□ 0.49
COL6A1-206ENST00000498614 SEMA3FQ13275 785 aa18.14■□□□□ 0.49
COL6A1-206ENST00000498614 GRB10Q13322 594 aa18.14■□□□□ 0.49
COL6A1-206ENST00000498614 SPA17Q15506 151 aa18.14■□□□□ 0.49
COL6A1-206ENST00000498614 DOK7Q18PE1 504 aa18.14■□□□□ 0.49
COL6A1-206ENST00000498614 CCDC70Q6NSX1 233 aa18.14■□□□□ 0.49
COL6A1-206ENST00000498614 KIAA0895Q8NCT3 520 aa18.14■□□□□ 0.49
COL6A1-206ENST00000498614 C7orf43Q8WVR3 580 aa18.14■□□□□ 0.49
COL6A1-206ENST00000498614 CCDC42Q96M95 316 aa18.14■□□□□ 0.49
COL6A1-206ENST00000498614 A0A087WUV0 522 aaPredicted RBP18.13■□□□□ 0.49
COL6A1-206ENST00000498614 MOCS3O95396 460 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 MATR3P43243 847 aaKnown RBP eCLIP18.13■□□□□ 0.49
COL6A1-206ENST00000498614 GTF2A1P52655 376 aaPredicted RBP18.13■□□□□ 0.49
COL6A1-206ENST00000498614 CDK17Q00537 523 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 AMPD3Q01432 767 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 GABPAQ06546 454 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 SPATA4Q8NEY3 305 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 NLGN2Q8NFZ4 835 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 MTMR9Q96QG7 549 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 CAPS2Q9BXY5 557 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 TSGA10Q9BZW7 698 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 PLIN4Q96Q06 1357 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 POTEMA6NI47 508 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 EDIL3O43854 480 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 ASPRV1Q53RT3 343 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 DYMQ7RTS9 669 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 GPIHBP1Q8IV16 184 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 CERS5Q8N5B7 392 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 TRIM58Q8NG06 486 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 PSMB7Q99436 277 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 SH2D4AQ9H788 454 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 BLOC1S4Q9NUP1 217 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 EHD2Q9NZN4 543 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 PCDHA13Q9Y5I0 950 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 GRIN2DO15399 1336 aa18.13■□□□□ 0.49
COL6A1-206ENST00000498614 A0A1W2PQJ5 194 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 TACC1O75410 805 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 TNNI2P48788 182 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 PDE4CQ08493 712 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 UBE2SQ16763 222 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 TTC19Q6DKK2 380 aaPredicted RBP18.12■□□□□ 0.49
COL6A1-206ENST00000498614 CNNM4Q6P4Q7 775 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 NFRKBQ6P4R8 1299 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 SV2BQ7L1I2 683 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 ZNF572Q7Z3I7 529 aaPredicted RBP18.12■□□□□ 0.49
COL6A1-206ENST00000498614 TMC4Q7Z404 712 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 MICALL1Q8N3F8 863 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 TSEN2Q8NCE0 465 aaKnown RBP18.12■□□□□ 0.49
COL6A1-206ENST00000498614 PNMA5Q96PV4 448 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 ERGIC2Q96RQ1 377 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 SH3GL2Q99962 352 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 IFIH1Q9BYX4 1025 aaKnown RBP18.12■□□□□ 0.49
COL6A1-206ENST00000498614 ARHGAP20Q9P2F6 1191 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 MYMKA6NI61 221 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 EPHB6O15197 1021 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 CXCR5P32302 372 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms