RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 ARIH1Q9Y4X5 557 aaPredicted RBP10.24□□□□□ -0.77
SORT1-208ENST00000495777 LINC01553A4QN01 128 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 B4E1Z4 1266 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 PPP1R11O60927 126 aaPredicted RBP10.23□□□□□ -0.77
SORT1-208ENST00000495777 PPFIA4O75335 1185 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 PARP1P09874 1014 aaKnown RBP10.23□□□□□ -0.77
SORT1-208ENST00000495777 ZNF286BP0CG31 522 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 HOXC8P31273 242 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 CHMP4BP1P59074 171 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 HIC1Q14526 733 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 KIAA0753Q2KHM9 967 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 MYSM1Q5VVJ2 828 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 STOX1Q6ZVD7 989 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 SAMD3Q8N6K7 520 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 GDPD5Q8WTR4 605 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 RUFY2Q8WXA3 655 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 PDCD2LQ9BRP1 358 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 AMNQ9BXJ7 453 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 SUGCTQ9HAC7 445 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 MRVI1Q9Y6F6 885 aa10.23□□□□□ -0.77
SORT1-208ENST00000495777 TET1Q8NFU7 2136 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 CFBP00751 764 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 TGFB3P10600 412 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 IKBKEQ14164 716 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 SEC23AQ15436 765 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 HSDL1Q3SXM5 330 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 CELF3Q5SZQ8 465 aaKnown RBP10.22□□□□□ -0.77
SORT1-208ENST00000495777 ZNF618Q5T7W0 954 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 KCNV1Q6PIU1 500 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 CWC27Q6UX04 472 aaKnown RBP10.22□□□□□ -0.77
SORT1-208ENST00000495777 SERINC5Q86VE9 423 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 VSIG10LQ86VR7 867 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 DHX37Q8IY37 1157 aaKnown RBP10.22□□□□□ -0.77
SORT1-208ENST00000495777 STAG2Q8N3U4 1231 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 SP7Q8TDD2 431 aaPredicted RBP10.22□□□□□ -0.77
SORT1-208ENST00000495777 TGS1Q96RS0 853 aaKnown RBP10.22□□□□□ -0.77
SORT1-208ENST00000495777 C16orf70Q9BSU1 422 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 ZBED2Q9BTP6 218 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 KRT23Q9C075 422 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 EPHX3Q9H6B9 360 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 CNNM2Q9H8M5 875 aa10.22□□□□□ -0.77
SORT1-208ENST00000495777 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.21□□□□□ -0.77
SORT1-208ENST00000495777 PALM3A6NDB9 673 aaPredicted RBP10.21□□□□□ -0.77
SORT1-208ENST00000495777 ZBTB5O15062 677 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 DHX16O60231 1041 aaKnown RBP10.21□□□□□ -0.77
SORT1-208ENST00000495777 CDC45O75419 566 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 LGR5O75473 907 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 GSPT1P15170 499 aaKnown RBP10.21□□□□□ -0.77
SORT1-208ENST00000495777 UBA1P22314 1058 aaKnown RBP10.21□□□□□ -0.77
SORT1-208ENST00000495777 HTRA4P83105 476 aaPredicted RBP10.21□□□□□ -0.77
SORT1-208ENST00000495777 ZNF200P98182 395 aaPredicted RBP10.21□□□□□ -0.77
SORT1-208ENST00000495777 SP2Q02086 613 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 PGM5Q15124 567 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 IMMTQ16891 758 aaKnown RBP10.21□□□□□ -0.77
SORT1-208ENST00000495777 SLC35G1Q2M3R5 365 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 KHSRPQ92945 711 aaKnown RBP eCLIP10.21□□□□□ -0.77
SORT1-208ENST00000495777 FAM122AQ96E09 287 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 UBAC1Q9BSL1 405 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 ALG1Q9BT22 464 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 LRFN3Q9BTN0 628 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 VAT1LQ9HCJ6 419 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 DIAPH3Q9NSV4 1193 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 CTNNA3Q9UI47 895 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 MAD2L2Q9UI95 211 aa10.21□□□□□ -0.77
SORT1-208ENST00000495777 EMSYQ7Z589 1322 aa10.21□□□□□ -0.78
SORT1-208ENST00000495777 COL4A4P53420 1690 aaPredicted RBP10.21□□□□□ -0.78
SORT1-208ENST00000495777 LAMA4Q16363 1823 aa10.21□□□□□ -0.78
SORT1-208ENST00000495777 KLRF2D3W0D1 207 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 GPR37L1O60883 481 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 GGPS1O95749 300 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 HOXD11P31277 338 aaPredicted RBP10.2□□□□□ -0.78
SORT1-208ENST00000495777 PTPRSQ13332 1948 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 FRMPD4Q14CM0 1322 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 PLEKHG4Q58EX7 1191 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 IFIT1BQ5T764 474 aaKnown RBP10.2□□□□□ -0.78
SORT1-208ENST00000495777 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.2□□□□□ -0.781e-6■□□□□ 8.2
SORT1-208ENST00000495777 DBF4BQ8NFT6 615 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 IL31RAQ8NI17 732 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 SPATA33Q96N06 139 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 RIOX1Q9H6W3 641 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 UBE2ZQ9H832 354 aaPredicted RBP10.2□□□□□ -0.78
SORT1-208ENST00000495777 CD320Q9NPF0 282 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 C11orf16Q9NQ32 467 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 INSL6Q9Y581 213 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 PCDHA1Q9Y5I3 950 aa10.2□□□□□ -0.78
SORT1-208ENST00000495777 COL4A6Q14031 1691 aa10.19□□□□□ -0.78
SORT1-208ENST00000495777 RSPH10B2B2RC85 870 aa10.19□□□□□ -0.78
SORT1-208ENST00000495777 PI4K2BG5E9Z4 385 aa10.19□□□□□ -0.78
SORT1-208ENST00000495777 RBAK-RBAKDNI3L0D1 243 aa10.19□□□□□ -0.78
SORT1-208ENST00000495777 EPB41L2O43491 1005 aaKnown RBP10.19□□□□□ -0.78
SORT1-208ENST00000495777 CAND2O75155 1236 aa10.19□□□□□ -0.78
SORT1-208ENST00000495777 RSPH10BP0C881 870 aa10.19□□□□□ -0.78
SORT1-208ENST00000495777 MYCLP12524 364 aaPredicted RBP10.19□□□□□ -0.78
SORT1-208ENST00000495777 HOXA13P31271 388 aaPredicted RBP10.19□□□□□ -0.78
SORT1-208ENST00000495777 TRAF1Q13077 416 aa10.19□□□□□ -0.78
SORT1-208ENST00000495777 LEXMQ3ZCV2 418 aa10.19□□□□□ -0.78
SORT1-208ENST00000495777 TMEM31Q5JXX7 168 aa10.19□□□□□ -0.78
SORT1-208ENST00000495777 INPP4AQ96PE3 977 aaPredicted RBP10.19□□□□□ -0.78
SORT1-208ENST00000495777 IL25Q9H293 177 aa10.19□□□□□ -0.78
SORT1-208ENST00000495777 MTUS1Q9ULD2 1270 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms