RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 TET1Q8NFU7 2136 aa21.35■■□□□ 1.01
CHD1L-209ENST00000492728 PFKMP08237 780 aa21.34■■□□□ 1.01
CHD1L-209ENST00000492728 CCND2P30279 289 aa21.34■■□□□ 1.01
CHD1L-209ENST00000492728 ADGRE1Q14246 886 aa21.34■■□□□ 1.01
CHD1L-209ENST00000492728 MFSD10Q14728 455 aa21.34■■□□□ 1.01
CHD1L-209ENST00000492728 RAB30Q15771 203 aa21.34■■□□□ 1.01
CHD1L-209ENST00000492728 BMP2KLQ5H9B9 411 aa21.34■■□□□ 1.01
CHD1L-209ENST00000492728 MTA3Q9BTC8 594 aa21.34■■□□□ 1.01
CHD1L-209ENST00000492728 COL25A1Q9BXS0 654 aaPredicted RBP21.34■■□□□ 1.01
CHD1L-209ENST00000492728 GTF2IRD1Q9UHL9 959 aa21.34■■□□□ 1.01
CHD1L-209ENST00000492728 NOD1Q9Y239 953 aa21.34■■□□□ 1.01
CHD1L-209ENST00000492728 TELO2Q9Y4R8 837 aa21.34■■□□□ 1.01
CHD1L-209ENST00000492728 SLC4A7Q9Y6M7 1214 aa21.34■■□□□ 1.01
CHD1L-209ENST00000492728 MCM5P33992 734 aa21.33■■□□□ 1.01
CHD1L-209ENST00000492728 ZNF200P98182 395 aaPredicted RBP21.33■■□□□ 1.01
CHD1L-209ENST00000492728 KIAA0753Q2KHM9 967 aa21.33■■□□□ 1.01
CHD1L-209ENST00000492728 TCTN1Q2MV58 587 aa21.33■■□□□ 1.01
CHD1L-209ENST00000492728 USP17L6PQ6QN14 398 aa21.33■■□□□ 1.01
CHD1L-209ENST00000492728 CTCFLQ8NI51 663 aaPredicted RBP21.33■■□□□ 1.01
CHD1L-209ENST00000492728 SPATA33Q96N06 139 aa21.33■■□□□ 1.01
CHD1L-209ENST00000492728 MSRAQ9UJ68 235 aa21.33■■□□□ 1.01
CHD1L-209ENST00000492728 MYH7BA7E2Y1 1941 aa21.33■■□□□ 1
CHD1L-209ENST00000492728 hCG_1642624A0A1W2PR95 340 aa21.32■■□□□ 1
CHD1L-209ENST00000492728 MEIS2O14770 477 aa21.32■■□□□ 1
CHD1L-209ENST00000492728 ATP2A2P16615 1042 aaKnown RBP21.32■■□□□ 1
CHD1L-209ENST00000492728 RFC2P35250 354 aa21.32■■□□□ 1
CHD1L-209ENST00000492728 TRAF1Q13077 416 aa21.32■■□□□ 1
CHD1L-209ENST00000492728 BFSP2Q13515 415 aa21.32■■□□□ 1
CHD1L-209ENST00000492728 TRAF7Q6Q0C0 670 aa21.32■■□□□ 1
CHD1L-209ENST00000492728 CENPQQ7L2Z9 268 aaPredicted RBP21.32■■□□□ 1
CHD1L-209ENST00000492728 TMEM87BQ96K49 555 aa21.32■■□□□ 1
CHD1L-209ENST00000492728 INPP4AQ96PE3 977 aaPredicted RBP21.32■■□□□ 1
CHD1L-209ENST00000492728 C16orf70Q9BSU1 422 aa21.32■■□□□ 1
CHD1L-209ENST00000492728 ARHGEF15O94989 841 aa21.31■■□□□ 1
CHD1L-209ENST00000492728 RBL2Q08999 1139 aa21.31■■□□□ 1
CHD1L-209ENST00000492728 TRIM71Q2Q1W2 868 aaKnown RBP21.31■■□□□ 1
CHD1L-209ENST00000492728 NFXL1Q6ZNB6 911 aa21.31■■□□□ 1
CHD1L-209ENST00000492728 RETREG2Q8NC44 543 aa21.31■■□□□ 1
CHD1L-209ENST00000492728 CAGE1Q8TC20 777 aa21.31■■□□□ 1
CHD1L-209ENST00000492728 RRP36Q96EU6 259 aaKnown RBP21.31■■□□□ 1
CHD1L-209ENST00000492728 PRDM6Q9NQX0 595 aa21.31■■□□□ 1
CHD1L-209ENST00000492728 PTPRSQ13332 1948 aa21.31■■□□□ 1
CHD1L-209ENST00000492728 TRIP12Q14669 1992 aaPredicted RBP21.3■■□□□ 1
CHD1L-209ENST00000492728 CCDC69A6NI79 296 aa21.3■■□□□ 1
CHD1L-209ENST00000492728 SMARCA1P28370 1054 aa21.3■■□□□ 1
CHD1L-209ENST00000492728 KIF5BP33176 963 aa21.3■■□□□ 1
CHD1L-209ENST00000492728 LIFRP42702 1097 aa21.3■■□□□ 1
CHD1L-209ENST00000492728 KCNV1Q6PIU1 500 aa21.3■■□□□ 1
CHD1L-209ENST00000492728 LRRC8DQ7L1W4 858 aa21.3■■□□□ 1
CHD1L-209ENST00000492728 C7orf31Q8N865 590 aa21.3■■□□□ 1
CHD1L-209ENST00000492728 AFAP1L1Q8TED9 768 aa21.3■■□□□ 1
CHD1L-209ENST00000492728 TCEANC2Q96MN5 208 aa21.3■■□□□ 1
CHD1L-209ENST00000492728 KATNAL1Q9BW62 490 aa21.3■■□□□ 1
CHD1L-209ENST00000492728 RTEL1Q9NZ71 1219 aa21.3■■□□□ 1
CHD1L-209ENST00000492728 DOCK5Q9H7D0 1870 aa21.3■■□□□ 1
CHD1L-209ENST00000492728 PIK3CDO00329 1044 aa21.29■■□□□ 1
CHD1L-209ENST00000492728 NBNO60934 754 aa21.29■■□□□ 1
CHD1L-209ENST00000492728 TGFB3P10600 412 aa21.29■■□□□ 1
CHD1L-209ENST00000492728 CKBP12277 381 aa21.29■■□□□ 1
CHD1L-209ENST00000492728 ICAM3P32942 547 aa21.29■■□□□ 1
CHD1L-209ENST00000492728 MBTPS1Q14703 1052 aa21.29■■□□□ 1
CHD1L-209ENST00000492728 TMTC3Q6ZXV5 915 aa21.29■■□□□ 1
CHD1L-209ENST00000492728 RASEFQ8IZ41 740 aa21.29■■□□□ 1
CHD1L-209ENST00000492728 FTOQ9C0B1 505 aaKnown RBP eCLIP21.29■■□□□ 1
CHD1L-209ENST00000492728 SLC28A3Q9HAS3 691 aa21.29■■□□□ 1
CHD1L-209ENST00000492728 PCDHA11Q9Y5I1 949 aa21.29■■□□□ 1
CHD1L-209ENST00000492728 SPATA31C2B4DYI2 1134 aa21.28■■□□□ 1
CHD1L-209ENST00000492728 PPFIA4O75335 1185 aa21.28■■□□□ 1
CHD1L-209ENST00000492728 SELPP16109 830 aa21.28■■□□□ 1
CHD1L-209ENST00000492728 ADCK5Q3MIX3 580 aa21.28■■□□□ 1
CHD1L-209ENST00000492728 PPP2R2DQ66LE6 453 aa21.28■■□□□ 1
CHD1L-209ENST00000492728 SGMS1Q86VZ5 419 aa21.28■■□□□ 1
CHD1L-209ENST00000492728 MICU3Q86XE3 530 aa21.28■■□□□ 1
CHD1L-209ENST00000492728 LZTS2Q9BRK4 669 aa21.28■■□□□ 1
CHD1L-209ENST00000492728 SEC63Q9UGP8 760 aaKnown RBP21.28■■□□□ 1
CHD1L-209ENST00000492728 LGALS2P05162 132 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 CA3P07451 260 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 ACTN1P12814 892 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 HOXC8P31273 242 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 GNAQP50148 359 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 PTK7Q13308 1070 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 UBE2SQ16763 222 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 SPRED2Q7Z698 418 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 TMCO2Q7Z6W1 182 aaPredicted RBP21.27■■□□□ 1
CHD1L-209ENST00000492728 TRIM50Q86XT4 487 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 TMTC2Q8N394 836 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 CCDC82Q8N4S0 544 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 CCDC155Q8N6L0 562 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 SMARCC2Q8TAQ2 1214 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 GAS2L1Q99501 681 aaPredicted RBP21.27■■□□□ 1
CHD1L-209ENST00000492728 MLXIPQ9HAP2 919 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 SLC12A7Q9Y666 1083 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 REV3LO60673 3130 aa21.27■■□□□ 1
CHD1L-209ENST00000492728 MYO9BQ13459 2157 aa21.26■□□□□ 0.99
CHD1L-209ENST00000492728 CXCL10P02778 98 aa21.26■□□□□ 0.99
CHD1L-209ENST00000492728 GNPTABQ3T906 1256 aa21.26■□□□□ 0.99
CHD1L-209ENST00000492728 ZNF618Q5T7W0 954 aa21.26■□□□□ 0.99
CHD1L-209ENST00000492728 PCNX4Q63HM2 1172 aa21.26■□□□□ 0.99
CHD1L-209ENST00000492728 METTL7BQ6UX53 244 aa21.26■□□□□ 0.99
CHD1L-209ENST00000492728 CYFIP1Q7L576 1253 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms