RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 LARP6Q9BRS8 491 aaKnown RBP9.96□□□□□ -0.82
HPS4-215ENST00000491142 FTOQ9C0B1 505 aaKnown RBP eCLIP9.96□□□□□ -0.82
HPS4-215ENST00000491142 EPB41L4AQ9HCS5 686 aaPredicted RBP9.96□□□□□ -0.82
HPS4-215ENST00000491142 CYP39A1Q9NYL5 469 aa9.96□□□□□ -0.82
HPS4-215ENST00000491142 CTNNA3Q9UI47 895 aa9.96□□□□□ -0.82
HPS4-215ENST00000491142 BRPF3Q9ULD4 1205 aa9.96□□□□□ -0.82
HPS4-215ENST00000491142 MTMR6Q9Y217 621 aa9.96□□□□□ -0.82
HPS4-215ENST00000491142 KIF28PB7ZC32 967 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 RBAK-RBAKDNI3L0D1 243 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 EXOSC10Q01780 885 aaKnown RBP9.95□□□□□ -0.82
HPS4-215ENST00000491142 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
HPS4-215ENST00000491142 CSPP1Q1MSJ5 1256 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 NBPF20Q3BBV1 942 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 TKFCQ3LXA3 575 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 ZSCAN23Q3MJ62 389 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 DUSP28Q4G0W2 176 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 CAVIN1Q6NZI2 390 aaKnown RBP9.95□□□□□ -0.82
HPS4-215ENST00000491142 NSMFQ6X4W1 530 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 Q6ZUG5 572 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 STOX1Q6ZVD7 989 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 KCTD1Q719H9 257 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 DHX32Q7L7V1 743 aaKnown RBP9.95□□□□□ -0.82
HPS4-215ENST00000491142 TMCO2Q7Z6W1 182 aaPredicted RBP9.95□□□□□ -0.82
HPS4-215ENST00000491142 FAM160B2Q86V87 743 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 GAS2L3Q86XJ1 694 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 MORC4Q8TE76 937 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 CHURC1Q8WUH1 139 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 STAG1Q8WVM7 1258 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 LLPHQ9BRT6 129 aaKnown RBP9.95□□□□□ -0.82
HPS4-215ENST00000491142 MFRPQ9BY79 579 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 WDR11Q9BZH6 1224 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 VTA1Q9NP79 307 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 SYNPO2Q9UMS6 1093 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 MYH4Q9Y623 1939 aa9.95□□□□□ -0.82
HPS4-215ENST00000491142 WDR19Q8NEZ3 1342 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 E7EWF7 191 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 TSPY3P0CV98 308 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 TSPY8P0CW00 308 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 RFC2P35250 354 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 SLC1A4P43007 532 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 TDO2P48775 406 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 FOXD4L5Q5VV16 416 aaPredicted RBP9.94□□□□□ -0.82
HPS4-215ENST00000491142 RASGRP2Q7LDG7 609 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 NECAB1Q8N987 351 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 RETREG2Q8NC44 543 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 NEDD1Q8NHV4 660 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 GDPD5Q8WTR4 605 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 FOXD4L4Q8WXT5 416 aaPredicted RBP9.94□□□□□ -0.82
HPS4-215ENST00000491142 SYAP1Q96A49 352 aaPredicted RBP9.94□□□□□ -0.82
HPS4-215ENST00000491142 GMCL1Q96IK5 515 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 MTG1Q9BT17 334 aaPredicted RBP9.94□□□□□ -0.82
HPS4-215ENST00000491142 PRR12Q9ULL5 1215 aa9.94□□□□□ -0.82
HPS4-215ENST00000491142 MUC6Q6W4X9 2439 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 ZMYM6O95789 1325 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 RBM47A0AV96 593 aaKnown RBP9.93□□□□□ -0.82
HPS4-215ENST00000491142 FOXP2O15409 715 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 GPAA1O43292 621 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 PFKFB2O60825 505 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 APPP05067 770 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 NCLP19338 710 aaKnown RBP9.93□□□□□ -0.82
HPS4-215ENST00000491142 CPT1AP50416 773 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 EVCP57679 992 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 TFAP4Q01664 338 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 BAATQ14032 418 aaPredicted RBP9.93□□□□□ -0.82
HPS4-215ENST00000491142 GPNMBQ14956 572 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 RCSD1Q6JBY9 416 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 IFNL3Q8IZI9 196 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 OR6J1Q8NGC5 347 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 SMARCC2Q8TAQ2 1214 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 SUGCTQ9HAC7 445 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 ZNF287Q9HBT7 754 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 GPHNQ9NQX3 736 aaPredicted RBP9.93□□□□□ -0.82
HPS4-215ENST00000491142 TMEM63CQ9P1W3 806 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 MTUS1Q9ULD2 1270 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 CCPG1Q9ULG6 757 aa9.93□□□□□ -0.82
HPS4-215ENST00000491142 PIEZO1Q92508 2521 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 PLIN4Q96Q06 1357 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.92□□□□□ -0.82
HPS4-215ENST00000491142 PRR33A8MZF0 331 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 PATL2C9JE40 543 aaKnown RBP9.92□□□□□ -0.82
HPS4-215ENST00000491142 PLA2G6O60733 806 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 BAIAP3O94812 1187 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 ALDH5A1P51649 535 aaPredicted RBP9.92□□□□□ -0.82
HPS4-215ENST00000491142 CHMP4BP1P59074 171 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 WDR5P61964 334 aaKnown RBP9.92□□□□□ -0.82
HPS4-215ENST00000491142 UBE2HP62256 183 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 DEFB103AP81534 67 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 BFSP2Q13515 415 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 IMMTQ16891 758 aaKnown RBP9.92□□□□□ -0.82
HPS4-215ENST00000491142 LARP1BQ659C4 914 aaKnown RBP9.92□□□□□ -0.82
HPS4-215ENST00000491142 NFRKBQ6P4R8 1299 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 LRSAM1Q6UWE0 723 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 TMEM92Q6UXU6 159 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 FAM178BQ8IXR5 827 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 GJD3Q8N144 294 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.92□□□□□ -0.82
HPS4-215ENST00000491142 COPS5Q92905 334 aa9.92□□□□□ -0.82
HPS4-215ENST00000491142 ZNF274Q96GC6 653 aaPredicted RBP9.92□□□□□ -0.82
HPS4-215ENST00000491142 CHAMP1Q96JM3 812 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms