RNA–Protein interactions for RNA: ENST00000489283.5

PLS3-207, Transcript of plastin 3, humanhuman

TSL 1 (best)

Gene PLS3, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-207ENST00000489283 ACTN1P12814 892 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 HOXD8P13378 290 aaPredicted RBP16.23■□□□□ 0.19
PLS3-207ENST00000489283 ATP2A2P16615 1042 aaKnown RBP16.23■□□□□ 0.19
PLS3-207ENST00000489283 RXRAP19793 462 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 SP2Q02086 613 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 NECTIN1Q15223 517 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 KIAA0753Q2KHM9 967 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 HSDL1Q3SXM5 330 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 C7orf31Q8N865 590 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 USP38Q8NB14 1042 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 CAGE1Q8TC20 777 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 AFAP1L1Q8TED9 768 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 DHX38Q92620 1227 aaKnown RBP16.23■□□□□ 0.19
PLS3-207ENST00000489283 RRP36Q96EU6 259 aaKnown RBP16.23■□□□□ 0.19
PLS3-207ENST00000489283 SPATA33Q96N06 139 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 GAS2L1Q99501 681 aaPredicted RBP16.23■□□□□ 0.19
PLS3-207ENST00000489283 COL4A4P53420 1690 aaPredicted RBP16.22■□□□□ 0.19
PLS3-207ENST00000489283 MYO9BQ13459 2157 aa16.22■□□□□ 0.19
PLS3-207ENST00000489283 MYOGP15173 224 aa16.22■□□□□ 0.19
PLS3-207ENST00000489283 MRPS9P82933 396 aaKnown RBP16.22■□□□□ 0.19
PLS3-207ENST00000489283 BMP2KLQ5H9B9 411 aa16.22■□□□□ 0.19
PLS3-207ENST00000489283 CENPQQ7L2Z9 268 aaPredicted RBP16.22■□□□□ 0.19
PLS3-207ENST00000489283 RAB11FIP4Q86YS3 637 aa16.22■□□□□ 0.19
PLS3-207ENST00000489283 LZTS2Q9BRK4 669 aa16.22■□□□□ 0.19
PLS3-207ENST00000489283 COL25A1Q9BXS0 654 aaPredicted RBP16.22■□□□□ 0.19
PLS3-207ENST00000489283 LRRC2Q9BYS8 371 aa16.22■□□□□ 0.19
PLS3-207ENST00000489283 FTOQ9C0B1 505 aaKnown RBP eCLIP16.22■□□□□ 0.19
PLS3-207ENST00000489283 SLC28A3Q9HAS3 691 aa16.22■□□□□ 0.19
PLS3-207ENST00000489283 SEC63Q9UGP8 760 aaKnown RBP16.22■□□□□ 0.19
PLS3-207ENST00000489283 PCDHA11Q9Y5I1 949 aa16.22■□□□□ 0.19
PLS3-207ENST00000489283 PRUNE2Q8WUY3 3088 aa16.22■□□□□ 0.19
PLS3-207ENST00000489283 CHD9Q3L8U1 2897 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 TGFB3P10600 412 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 SMARCA1P28370 1054 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 LIFRP42702 1097 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 GNAQP50148 359 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 RBL2Q08999 1139 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 GNPTABQ3T906 1256 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 PPP2R2DQ66LE6 453 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 LRRC8DQ7L1W4 858 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 CMTR1Q8N1G2 835 aaKnown RBP16.21■□□□□ 0.19
PLS3-207ENST00000489283 TMTC2Q8N394 836 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 SRBD1Q8N5C6 995 aaKnown RBP16.21■□□□□ 0.19
PLS3-207ENST00000489283 SMARCC2Q8TAQ2 1214 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 SLC9A7Q96T83 725 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 MLXIPQ9HAP2 919 aa16.21■□□□□ 0.19
PLS3-207ENST00000489283 PPFIA4O75335 1185 aa16.2■□□□□ 0.18
PLS3-207ENST00000489283 STAM2O75886 525 aa16.2■□□□□ 0.18
PLS3-207ENST00000489283 CALM1P0DP23 149 aa16.2■□□□□ 0.18
PLS3-207ENST00000489283 CALM2P0DP24 149 aa16.2■□□□□ 0.18
PLS3-207ENST00000489283 CALM3P0DP25 149 aa16.2■□□□□ 0.18
PLS3-207ENST00000489283 SELPP16109 830 aa16.2■□□□□ 0.18
PLS3-207ENST00000489283 SEMA3FQ13275 785 aa16.2■□□□□ 0.18
PLS3-207ENST00000489283 USP17L6PQ6QN14 398 aa16.2■□□□□ 0.18
PLS3-207ENST00000489283 CUL5Q93034 780 aa16.2■□□□□ 0.18
PLS3-207ENST00000489283 INPP4AQ96PE3 977 aaPredicted RBP16.2■□□□□ 0.18
PLS3-207ENST00000489283 BCAS3Q9H6U6 928 aa16.2■□□□□ 0.18
PLS3-207ENST00000489283 SLC12A7Q9Y666 1083 aa16.2■□□□□ 0.18
PLS3-207ENST00000489283 MICAL3Q7RTP6 2002 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 PIK3CDO00329 1044 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 MEIS2O14770 477 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 BAIAP3O94812 1187 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 CKBP12277 381 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 ICAM3P32942 547 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 ZNF200P98182 395 aaPredicted RBP16.19■□□□□ 0.18
PLS3-207ENST00000489283 PTK7Q13308 1070 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 ADGRE1Q14246 886 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 HIC1Q14526 733 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 GPNMBQ14956 572 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 MICU3Q86XE3 530 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 WNT8BQ93098 351 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 C16orf70Q9BSU1 422 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 RTEL1Q9NZ71 1219 aa16.19■□□□□ 0.18
PLS3-207ENST00000489283 A0A0C4DFX4 3053 aa16.18■□□□□ 0.18
PLS3-207ENST00000489283 NOP56O00567 594 aaKnown RBP16.18■□□□□ 0.18
PLS3-207ENST00000489283 FIBPO43427 364 aa16.18■□□□□ 0.18
PLS3-207ENST00000489283 LGALS2P05162 132 aa16.18■□□□□ 0.18
PLS3-207ENST00000489283 CA3P07451 260 aa16.18■□□□□ 0.18
PLS3-207ENST00000489283 TRIM71Q2Q1W2 868 aaKnown RBP16.18■□□□□ 0.18
PLS3-207ENST00000489283 RNF20Q5VTR2 975 aa16.18■□□□□ 0.18
PLS3-207ENST00000489283 PCNX4Q63HM2 1172 aa16.18■□□□□ 0.18
PLS3-207ENST00000489283 METTL7BQ6UX53 244 aa16.18■□□□□ 0.18
PLS3-207ENST00000489283 TMTC3Q6ZXV5 915 aa16.18■□□□□ 0.18
PLS3-207ENST00000489283 PPM1EQ8WY54 764 aa16.18■□□□□ 0.18
PLS3-207ENST00000489283 CHD7Q9P2D1 2997 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 SIP14410 1827 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 hCG_1642624A0A1W2PR95 340 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 SPATA31C2B4DYI2 1134 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 RBAK-RBAKDNI3L0D1 243 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 NBNO60934 754 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 PARNO95453 639 aaKnown RBP16.17■□□□□ 0.18
PLS3-207ENST00000489283 CXCL10P02778 98 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 IGFBP4P22692 258 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 NEDD9Q14511 834 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 CNKSR3Q6P9H4 555 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 TRAF7Q6Q0C0 670 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 CYFIP1Q7L576 1253 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 SGMS1Q86VZ5 419 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 HERC6Q8IVU3 1022 aa16.17■□□□□ 0.18
PLS3-207ENST00000489283 CCDC82Q8N4S0 544 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms