RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 HDAC6Q9UBN7 1215 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 ZBBXA8MT70 800 aa13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 MEIS2O14770 477 aa13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 PPFIA4O75335 1185 aa13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 UBA1P22314 1058 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 EXOSC10Q01780 885 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 BFSP2Q13515 415 aa13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 KIAA0753Q2KHM9 967 aa13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 ADCK5Q3MIX3 580 aa13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 SYNE3Q6ZMZ3 975 aa13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 SESTD1Q86VW0 696 aa13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 MICU3Q86XE3 530 aa13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 FTOQ9C0B1 505 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 PSTPIP2Q9H939 334 aa13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 MSRAQ9UJ68 235 aa13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 SLC4A7Q9Y6M7 1214 aa13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 BAZ2BQ9UIF8 2168 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-215ENST00000488920 FRMPD4Q14CM0 1322 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 SPATA31C2B4DYI2 1134 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 HAS3O00219 553 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 PIK3CDO00329 1044 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 F2P00734 622 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 HOXD8P13378 290 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 FOSL2P15408 326 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 RABGGTBP53611 331 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 GNPTABQ3T906 1256 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 TMTC3Q6ZXV5 915 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 DHX32Q7L7V1 743 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 SGMS1Q86VZ5 419 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 MAFAQ8NHW3 353 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 KATNAL1Q9BW62 490 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 GTF2IRD1Q9UHL9 959 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 BRPF3Q9ULD4 1205 aa13.75□□□□□ -0.21
CCHCR1-215ENST00000488920 DLL1O00548 723 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 STAM2O75886 525 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 PFKMP08237 780 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 MYOGP15173 224 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 ICAM3P32942 547 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 RFC2P35250 354 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 ZNF200P98182 395 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 SEMA3FQ13275 785 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 RAB30Q15771 203 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 TSGA10IPQ3SY00 556 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 PCNX4Q63HM2 1172 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 APOA5Q6Q788 366 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 CYFIP1Q7L576 1253 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 HEATR3Q7Z4Q2 680 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 CCDC155Q8N6L0 562 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 DHX38Q92620 1227 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 INPP4AQ96PE3 977 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 C16orf70Q9BSU1 422 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 NKX2-4Q9H2Z4 354 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 YBX2Q9Y2T7 364 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 SCN10AQ9Y5Y9 1956 aa13.74□□□□□ -0.21
CCHCR1-215ENST00000488920 MYH6P13533 1939 aa13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 RBAK-RBAKDNI3L0D1 243 aa13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 NOP56O00567 594 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 FIBPO43427 364 aa13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 ACTN1P12814 892 aa13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 ATP2A2P16615 1042 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 NEDD9Q14511 834 aa13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 HIC1Q14526 733 aa13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 KRT32Q14532 448 aa13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 UBE2SQ16763 222 aa13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 CAGE1Q8TC20 777 aa13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 PRDM12Q9H4Q4 367 aa13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 TELO2Q9Y4R8 837 aa13.73□□□□□ -0.21
CCHCR1-215ENST00000488920 CDH23Q9H251 3354 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 H3BRB1 525 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 ZBTB43O43298 467 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 CKBP12277 381 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 CPA1P15085 419 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 SELPP16109 830 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 SP4Q02446 784 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 PTK7Q13308 1070 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 GPNMBQ14956 572 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 RTN1Q16799 776 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 XRRA1Q6P2D8 792 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 METTL7BQ6UX53 244 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 LRRC8DQ7L1W4 858 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 AFAP1L1Q8TED9 768 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 WNT8BQ93098 351 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 GPR20Q99678 358 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 TUT1Q9H6E5 874 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 SLC28A3Q9HAS3 691 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 NAP1L2Q9ULW6 460 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 V9GY48 417 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 EYSQ5T1H1 3165 aa13.72□□□□□ -0.21
CCHCR1-215ENST00000488920 KLF18A0A0U1RQI7 1052 aa13.71□□□□□ -0.21
CCHCR1-215ENST00000488920 LGALS2P05162 132 aa13.71□□□□□ -0.21
CCHCR1-215ENST00000488920 HMGB1P09429 215 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-215ENST00000488920 FGD1P98174 961 aa13.71□□□□□ -0.21
CCHCR1-215ENST00000488920 FUT2Q10981 343 aa13.71□□□□□ -0.21
CCHCR1-215ENST00000488920 UTP14CQ5TAP6 766 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-215ENST00000488920 WWC2Q6AWC2 1192 aa13.71□□□□□ -0.21
CCHCR1-215ENST00000488920 NLRX1Q86UT6 975 aa13.71□□□□□ -0.21
CCHCR1-215ENST00000488920 RBM28Q9NW13 759 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-215ENST00000488920 PCDHA6Q9UN73 950 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 247.4 ms