RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 SETQ01105 290 aaPredicted RBP12.29□□□□□ -0.44
COL21A1-211ENST00000488912 KANK3Q6NY19 840 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 RNF214Q8ND24 703 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 CCDC39Q9UFE4 941 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 USP25Q9UHP3 1055 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 PFASO15067 1338 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 ESPNB1AK53 854 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 ERVK-9P63128 1117 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 ERVK-24P63145 666 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 RRAGBQ5VZM2 374 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 SH3RF1Q7Z6J0 888 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 SNX29Q8TEQ0 813 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 STAMQ92783 540 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 PAGE5Q96GU1 130 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 WDR11Q9BZH6 1224 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 MAF1Q9H063 256 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 HOOK1Q9UJC3 728 aaKnown RBP12.29□□□□□ -0.44
COL21A1-211ENST00000488912 VAV3Q9UKW4 847 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 UBIAD1Q9Y5Z9 338 aa12.29□□□□□ -0.44
COL21A1-211ENST00000488912 ASTN1O14525 1302 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 BIN1O00499 593 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 SLC25A27O95847 323 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 CASP1P29466 404 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 CNTN2Q02246 1040 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 GRB10Q13322 594 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 ANO6Q4KMQ2 910 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 KRT79Q5XKE5 535 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 RGMBQ6NW40 437 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 SMC1BQ8NDV3 1235 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 NSUN6Q8TEA1 469 aaKnown RBP12.28□□□□□ -0.44
COL21A1-211ENST00000488912 SLC5A5Q92911 643 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 MTRQ99707 1265 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 KCNH7Q9NS40 1196 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 TUBE1Q9UJT0 475 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 PCDHA5Q9Y5H7 936 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 PLXNB2O15031 1838 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 NR3C2P08235 984 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 BCRP11274 1271 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 PDE4CQ08493 712 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 STX1AQ16623 288 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 LRCH2Q5VUJ6 765 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 ANKRD13CQ8N6S4 541 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 GTF3C2Q8WUA4 911 aaPredicted RBP12.28□□□□□ -0.44
COL21A1-211ENST00000488912 CALML4Q96GE6 196 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 CCDC34Q96HJ3 373 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 PNMA5Q96PV4 448 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 ZNF577Q9BSK1 485 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 LRRC37A2A6NM11 1700 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 DOCK5Q9H7D0 1870 aa12.28□□□□□ -0.44
COL21A1-211ENST00000488912 IPO5O00410 1097 aaKnown RBP12.27□□□□□ -0.44
COL21A1-211ENST00000488912 PSMD10O75832 226 aa12.27□□□□□ -0.44
COL21A1-211ENST00000488912 CCND2P30279 289 aa12.27□□□□□ -0.44
COL21A1-211ENST00000488912 MTMR1Q13613 665 aa12.27□□□□□ -0.44
COL21A1-211ENST00000488912 ECM1Q16610 540 aa12.27□□□□□ -0.44
COL21A1-211ENST00000488912 NCAPH2Q6IBW4 605 aa12.27□□□□□ -0.44
COL21A1-211ENST00000488912 NIPA1Q7RTP0 329 aa12.27□□□□□ -0.44
COL21A1-211ENST00000488912 VSIG10LQ86VR7 867 aa12.27□□□□□ -0.44
COL21A1-211ENST00000488912 DNAJC25Q9H1X3 360 aa12.27□□□□□ -0.44
COL21A1-211ENST00000488912 PORCNQ9H237 461 aa12.27□□□□□ -0.44
COL21A1-211ENST00000488912 JADE2Q9NQC1 790 aa12.27□□□□□ -0.44
COL21A1-211ENST00000488912 TLL2Q9Y6L7 1015 aa12.27□□□□□ -0.44
COL21A1-211ENST00000488912 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
COL21A1-211ENST00000488912 GAS7O60861 476 aa12.27□□□□□ -0.45
COL21A1-211ENST00000488912 COPB2P35606 906 aa12.27□□□□□ -0.45
COL21A1-211ENST00000488912 ISM2Q6H9L7 571 aa12.27□□□□□ -0.45
COL21A1-211ENST00000488912 C11orf57Q6ZUT1 292 aaPredicted RBP12.27□□□□□ -0.45
COL21A1-211ENST00000488912 OTOP1Q7RTM1 612 aa12.27□□□□□ -0.45
COL21A1-211ENST00000488912 CDK5RAP3Q96JB5 506 aa12.27□□□□□ -0.45
COL21A1-211ENST00000488912 PARK7Q99497 189 aaKnown RBP12.27□□□□□ -0.45
COL21A1-211ENST00000488912 PKD2L1Q9P0L9 805 aa12.27□□□□□ -0.45
COL21A1-211ENST00000488912 MCM3APO60318 1980 aa12.27□□□□□ -0.45
COL21A1-211ENST00000488912 SLC10A3P09131 477 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 CCT6AP40227 531 aaKnown RBP12.26□□□□□ -0.45
COL21A1-211ENST00000488912 DPYDQ12882 1025 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 DPCR1Q3MIW9 517 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 TMEM119Q4V9L6 283 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 NT5DC1Q5TFE4 455 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 WDR78Q5VTH9 848 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 XRRA1Q6P2D8 792 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.26□□□□□ -0.45
COL21A1-211ENST00000488912 GPRC5AQ8NFJ5 357 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 DNERQ8NFT8 737 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 SPATA20Q8TB22 786 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 SMARCE1Q969G3 411 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 BLZF1Q9H2G9 400 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 MROH8Q9H579 483 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 EFCC1Q9HA90 598 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 AGO4Q9HCK5 861 aaKnown RBP12.26□□□□□ -0.45
COL21A1-211ENST00000488912 ABT1Q9ULW3 272 aaKnown RBP12.26□□□□□ -0.45
COL21A1-211ENST00000488912 PLXNA1Q9UIW2 1896 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 POTEB3A0JP26 581 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 MANSC4A6NHS7 340 aaPredicted RBP12.26□□□□□ -0.45
COL21A1-211ENST00000488912 POTEB2H3BUK9 544 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 EML1O00423 815 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 IGF2BP3O00425 579 aaKnown RBP eCLIP12.26□□□□□ -0.45
COL21A1-211ENST00000488912 CHMP2AO43633 222 aa12.26□□□□□ -0.45
COL21A1-211ENST00000488912 GCLCP48506 637 aaPredicted RBP12.26□□□□□ -0.45
COL21A1-211ENST00000488912 SARSP49591 514 aaKnown RBP12.26□□□□□ -0.45
COL21A1-211ENST00000488912 ALDH5A1P51649 535 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms