RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 LAMC2Q13753 1193 aa13□□□□□ -0.33
PCYT1A-215ENST00000488235 MFSD10Q14728 455 aa13□□□□□ -0.33
PCYT1A-215ENST00000488235 SART3Q15020 963 aaKnown RBP13□□□□□ -0.33
PCYT1A-215ENST00000488235 NECTIN1Q15223 517 aa13□□□□□ -0.33
PCYT1A-215ENST00000488235 RAB30Q15771 203 aa13□□□□□ -0.33
PCYT1A-215ENST00000488235 DGKDQ16760 1214 aa13□□□□□ -0.33
PCYT1A-215ENST00000488235 CELF3Q5SZQ8 465 aaKnown RBP13□□□□□ -0.33
PCYT1A-215ENST00000488235 TRAF7Q6Q0C0 670 aa13□□□□□ -0.33
PCYT1A-215ENST00000488235 USP17L6PQ6QN14 398 aa13□□□□□ -0.33
PCYT1A-215ENST00000488235 SPRED2Q7Z698 418 aa13□□□□□ -0.33
PCYT1A-215ENST00000488235 TMCO2Q7Z6W1 182 aaPredicted RBP13□□□□□ -0.33
PCYT1A-215ENST00000488235 DHX37Q8IY37 1157 aaKnown RBP13□□□□□ -0.33
PCYT1A-215ENST00000488235 SRBD1Q8N5C6 995 aaKnown RBP13□□□□□ -0.33
PCYT1A-215ENST00000488235 ALG1Q9BT22 464 aa13□□□□□ -0.33
PCYT1A-215ENST00000488235 GTF2IRD1Q9UHL9 959 aa13□□□□□ -0.33
PCYT1A-215ENST00000488235 MSRAQ9UJ68 235 aa13□□□□□ -0.33
PCYT1A-215ENST00000488235 BDP1A6H8Y1 2624 aa12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 MEIS2O14770 477 aa12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 ATP2A2P16615 1042 aaKnown RBP12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 CCND2P30279 289 aa12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 MBTPS1Q14703 1052 aa12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 KIAA0753Q2KHM9 967 aa12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 TRIM71Q2Q1W2 868 aaKnown RBP12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 CREB3L3Q68CJ9 461 aa12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 PPM1EQ8WY54 764 aa12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 SPATA33Q96N06 139 aa12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 C16orf70Q9BSU1 422 aa12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 SPZ1Q9BXG8 430 aa12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 MTIF3Q9H2K0 278 aaKnown RBP12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 MAP3K20Q9NYL2 800 aaKnown RBP12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 RTEL1Q9NZ71 1219 aa12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 NOD1Q9Y239 953 aa12.99□□□□□ -0.33
PCYT1A-215ENST00000488235 TRIP12Q14669 1992 aaPredicted RBP12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 EPOPA6NHQ4 379 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 RFXAPO00287 272 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 NBNO60934 754 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 DDAH1O94760 285 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 PFKMP08237 780 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 CKBP12277 381 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 BFSP2Q13515 415 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 PPP2R2DQ66LE6 453 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 RETREG2Q8NC44 543 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 OSBPL7Q9BZF2 842 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 FTOQ9C0B1 505 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 CERS4Q9HA82 394 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 SLC28A3Q9HAS3 691 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 ANO2Q9NQ90 1003 aa12.98□□□□□ -0.33
PCYT1A-215ENST00000488235 CA3P07451 260 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 MCM5P33992 734 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 RFC2P35250 354 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 RBL2Q08999 1139 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 CCDC85BQ15834 202 aaPredicted RBP12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 CASC1Q6TDU7 716 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 LRRC8DQ7L1W4 858 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 TRIM50Q86XT4 487 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 CCDC82Q8N4S0 544 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 SAMD3Q8N6K7 520 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 C7orf31Q8N865 590 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 CAGE1Q8TC20 777 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 AFAP1L1Q8TED9 768 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 TCEANC2Q96MN5 208 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 INPP4AQ96PE3 977 aaPredicted RBP12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 GAS2L1Q99501 681 aaPredicted RBP12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 MAP3K14Q99558 947 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 PCDHA11Q9Y5I1 949 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 MYH7BA7E2Y1 1941 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 PTPRSQ13332 1948 aa12.97□□□□□ -0.33
PCYT1A-215ENST00000488235 LCHNA4D1U4 455 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 SPATA31C2B4DYI2 1134 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 PPFIA4O75335 1185 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 SELPP16109 830 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 IGFBP4P22692 258 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 DEFB103AP81534 67 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 TAP1Q03518 808 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 ZNF618Q5T7W0 954 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 KRT40Q6A162 431 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 NFXL1Q6ZNB6 911 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 CYFIP1Q7L576 1253 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 HERC6Q8IVU3 1022 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 CTCFLQ8NI51 663 aaPredicted RBP12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 RRP36Q96EU6 259 aaKnown RBP12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 TMEM87BQ96K49 555 aa12.96□□□□□ -0.33
PCYT1A-215ENST00000488235 PRRC2BQ5JSZ5 2229 aaKnown RBP12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 CXCL10P02778 98 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 LGALS2P05162 132 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 TGFB3P10600 412 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 HOXC8P31273 242 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 ICAM3P32942 547 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 LIFRP42702 1097 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 WDR5P61964 334 aaKnown RBP12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 PTK7Q13308 1070 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 UBE2SQ16763 222 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 ADCK5Q3MIX3 580 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 BMP2KLQ5H9B9 411 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 KCNV1Q6PIU1 500 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 TMTC3Q6ZXV5 915 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 SLC9A7Q96T83 725 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 GPR20Q99678 358 aa12.95□□□□□ -0.34
PCYT1A-215ENST00000488235 MTA3Q9BTC8 594 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms