RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 BFSP2Q13515 415 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 MFSD10Q14728 455 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 USP17L6PQ6QN14 398 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 SGMS1Q86VZ5 419 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 RETREG2Q8NC44 543 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 SPATA33Q96N06 139 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 KATNAL1Q9BW62 490 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 HDAC6Q9UBN7 1215 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 SEC63Q9UGP8 760 aaKnown RBP22.31■■□□□ 1.16
CD55-209ENST00000488171 GTF2IRD1Q9UHL9 959 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 YBX2Q9Y2T7 364 aaKnown RBP22.31■■□□□ 1.16
CD55-209ENST00000488171 SLC4A7Q9Y6M7 1214 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 UNC80Q8N2C7 3258 aa22.31■■□□□ 1.16
CD55-209ENST00000488171 PIK3CDO00329 1044 aa22.3■■□□□ 1.16
CD55-209ENST00000488171 MEIS2O14770 477 aa22.3■■□□□ 1.16
CD55-209ENST00000488171 PPFIA4O75335 1185 aa22.3■■□□□ 1.16
CD55-209ENST00000488171 RAB30Q15771 203 aa22.3■■□□□ 1.16
CD55-209ENST00000488171 KIAA0753Q2KHM9 967 aa22.3■■□□□ 1.16
CD55-209ENST00000488171 DHX38Q92620 1227 aaKnown RBP22.3■■□□□ 1.16
CD55-209ENST00000488171 INPP4AQ96PE3 977 aaPredicted RBP22.3■■□□□ 1.16
CD55-209ENST00000488171 ALG1Q9BT22 464 aa22.3■■□□□ 1.16
CD55-209ENST00000488171 BCAS3Q9H6U6 928 aa22.3■■□□□ 1.16
CD55-209ENST00000488171 MSRAQ9UJ68 235 aa22.3■■□□□ 1.16
CD55-209ENST00000488171 SLC12A7Q9Y666 1083 aa22.3■■□□□ 1.16
CD55-209ENST00000488171 ZBBXA8MT70 800 aa22.29■■□□□ 1.16
CD55-209ENST00000488171 DLL1O00548 723 aa22.29■■□□□ 1.16
CD55-209ENST00000488171 STAM2O75886 525 aa22.29■■□□□ 1.16
CD55-209ENST00000488171 RNF20Q5VTR2 975 aa22.29■■□□□ 1.16
CD55-209ENST00000488171 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.29■■□□□ 1.16
CD55-209ENST00000488171 C7orf31Q8N865 590 aa22.29■■□□□ 1.16
CD55-209ENST00000488171 FANCBQ8NB91 859 aa22.29■■□□□ 1.16
CD55-209ENST00000488171 CAGE1Q8TC20 777 aa22.29■■□□□ 1.16
CD55-209ENST00000488171 NKX2-4Q9H2Z4 354 aa22.29■■□□□ 1.16
CD55-209ENST00000488171 CDC45O75419 566 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 ICAM3P32942 547 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 RABGGTBP53611 331 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 SEMA3FQ13275 785 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 TMTC3Q6ZXV5 915 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 RASEFQ8IZ41 740 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 SMARCC2Q8TAQ2 1214 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 AFAP1L1Q8TED9 768 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 CUL5Q93034 780 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 NEK1Q96PY6 1258 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 C16orf70Q9BSU1 422 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 MLXIPQ9HAP2 919 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 CHD9Q3L8U1 2897 aa22.28■■□□□ 1.16
CD55-209ENST00000488171 TRIP12Q14669 1992 aaPredicted RBP22.27■■□□□ 1.16
CD55-209ENST00000488171 hCG_1642624A0A1W2PR95 340 aa22.27■■□□□ 1.16
CD55-209ENST00000488171 SPATA31C2B4DYI2 1134 aa22.27■■□□□ 1.16
CD55-209ENST00000488171 EXOSC10Q01780 885 aaKnown RBP22.27■■□□□ 1.16
CD55-209ENST00000488171 RBL2Q08999 1139 aa22.27■■□□□ 1.16
CD55-209ENST00000488171 GPNMBQ14956 572 aa22.27■■□□□ 1.16
CD55-209ENST00000488171 TSGA10IPQ3SY00 556 aa22.27■■□□□ 1.16
CD55-209ENST00000488171 GNPTABQ3T906 1256 aa22.27■■□□□ 1.16
CD55-209ENST00000488171 MICU3Q86XE3 530 aa22.27■■□□□ 1.16
CD55-209ENST00000488171 CCDC155Q8N6L0 562 aa22.27■■□□□ 1.16
CD55-209ENST00000488171 RTEL1Q9NZ71 1219 aa22.27■■□□□ 1.16
CD55-209ENST00000488171 A0A0C4DFX4 3053 aa22.27■■□□□ 1.16
CD55-209ENST00000488171 ACTN1P12814 892 aa22.26■■□□□ 1.15
CD55-209ENST00000488171 MYOGP15173 224 aa22.26■■□□□ 1.15
CD55-209ENST00000488171 ATP2A2P16615 1042 aaKnown RBP22.26■■□□□ 1.15
CD55-209ENST00000488171 HIC1Q14526 733 aa22.26■■□□□ 1.15
CD55-209ENST00000488171 ADCK5Q3MIX3 580 aa22.26■■□□□ 1.15
CD55-209ENST00000488171 PCNX4Q63HM2 1172 aa22.26■■□□□ 1.15
CD55-209ENST00000488171 CCDC82Q8N4S0 544 aa22.26■■□□□ 1.15
CD55-209ENST00000488171 DOCK5Q9H7D0 1870 aa22.26■■□□□ 1.15
CD55-209ENST00000488171 FIBPO43427 364 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 CKBP12277 381 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 ZNF200P98182 395 aaPredicted RBP22.25■■□□□ 1.15
CD55-209ENST00000488171 APOA5Q6Q788 366 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 LRRC8DQ7L1W4 858 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 WNT8BQ93098 351 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 TCEANC2Q96MN5 208 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 FTOQ9C0B1 505 aaKnown RBP eCLIP22.25■■□□□ 1.15
CD55-209ENST00000488171 PRDM12Q9H4Q4 367 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 PSTPIP2Q9H939 334 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 PCDHA11Q9Y5I1 949 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 TET1Q8NFU7 2136 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 SELPP16109 830 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 PTK7Q13308 1070 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 NEDD9Q14511 834 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 TRIM71Q2Q1W2 868 aaKnown RBP22.25■■□□□ 1.15
CD55-209ENST00000488171 XRRA1Q6P2D8 792 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 METTL7BQ6UX53 244 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 DHX32Q7L7V1 743 aaKnown RBP22.25■■□□□ 1.15
CD55-209ENST00000488171 SLC28A3Q9HAS3 691 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 BRPF3Q9ULD4 1205 aa22.25■■□□□ 1.15
CD55-209ENST00000488171 PRUNE2Q8WUY3 3088 aa22.24■■□□□ 1.15
CD55-209ENST00000488171 LGALS2P05162 132 aa22.24■■□□□ 1.15
CD55-209ENST00000488171 SYNE3Q6ZMZ3 975 aa22.24■■□□□ 1.15
CD55-209ENST00000488171 CYFIP1Q7L576 1253 aa22.24■■□□□ 1.15
CD55-209ENST00000488171 TELO2Q9Y4R8 837 aa22.24■■□□□ 1.15
CD55-209ENST00000488171 H3BRB1 525 aa22.23■■□□□ 1.15
CD55-209ENST00000488171 UBE2SQ16763 222 aa22.23■■□□□ 1.15
CD55-209ENST00000488171 TRAF7Q6Q0C0 670 aa22.23■■□□□ 1.15
CD55-209ENST00000488171 USP38Q8NB14 1042 aa22.23■■□□□ 1.15
CD55-209ENST00000488171 CNTNAP5Q8WYK1 1306 aa22.23■■□□□ 1.15
CD55-209ENST00000488171 SLC9A7Q96T83 725 aa22.23■■□□□ 1.15
CD55-209ENST00000488171 GPR20Q99678 358 aa22.23■■□□□ 1.15
CD55-209ENST00000488171 TUT1Q9H6E5 874 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms