RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 CEP57L1Q8IYX8 460 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 GPRC5AQ8NFJ5 357 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 GTF3C2Q8WUA4 911 aaPredicted RBP16.24■□□□□ 0.19
COL9A1-207ENST00000486080 STAMQ92783 540 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 PAGE5Q96GU1 130 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 RBSNQ9H1K0 784 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 EFCC1Q9HA90 598 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 KCNH7Q9NS40 1196 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 CCDC39Q9UFE4 941 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 VAV3Q9UKW4 847 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 MANSC4A6NHS7 340 aaPredicted RBP16.24■□□□□ 0.19
COL9A1-207ENST00000486080 TMEM88BA6NKF7 163 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 CCDC192P0DO97 292 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 CASP1P29466 404 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 CCND2P30279 289 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 SETQ01105 290 aaPredicted RBP16.24■□□□□ 0.19
COL9A1-207ENST00000486080 FSTL1Q12841 308 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 GRB10Q13322 594 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 POSTNQ15063 836 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 WDR78Q5VTH9 848 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 SASS6Q6UVJ0 657 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 ELOA2Q8IYF1 753 aaPredicted RBP16.24■□□□□ 0.19
COL9A1-207ENST00000486080 SNX29Q8TEQ0 813 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 PNMA5Q96PV4 448 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 PARK7Q99497 189 aaKnown RBP16.24■□□□□ 0.19
COL9A1-207ENST00000486080 ZNF577Q9BSK1 485 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 JADE2Q9NQC1 790 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 PKD2L1Q9P0L9 805 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 USP25Q9UHP3 1055 aa16.24■□□□□ 0.19
COL9A1-207ENST00000486080 POTEB2H3BUK9 544 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 PSMD10O75832 226 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 PGK2P07205 417 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 COPB2P35606 906 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 GCLCP48506 637 aaPredicted RBP16.23■□□□□ 0.19
COL9A1-207ENST00000486080 ECM1Q16610 540 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 LRCH2Q5VUJ6 765 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 KRT79Q5XKE5 535 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 NCAPH2Q6IBW4 605 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 KANK3Q6NY19 840 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 NIPA1Q7RTP0 329 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 SH3RF1Q7Z6J0 888 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 MTRQ99707 1265 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 PYM1Q9BRP8 204 aaKnown RBP16.23■□□□□ 0.19
COL9A1-207ENST00000486080 MROH8Q9H579 483 aa16.23■□□□□ 0.19
COL9A1-207ENST00000486080 SOWAHBA6NEL2 793 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 IPO5O00410 1097 aaKnown RBP16.22■□□□□ 0.19
COL9A1-207ENST00000486080 BIN1O00499 593 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 BCRP11274 1271 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 MTMR1Q13613 665 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 XRRA1Q6P2D8 792 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.22■□□□□ 0.19
COL9A1-207ENST00000486080 OTOP1Q7RTM1 612 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 FAM133AQ8N9E0 248 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 CALML4Q96GE6 196 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 ZIC5Q96T25 663 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 MMP19Q99542 508 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 AGO4Q9HCK5 861 aaKnown RBP16.22■□□□□ 0.19
COL9A1-207ENST00000486080 MORF4L1Q9UBU8 362 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 PCDHA5Q9Y5H7 936 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 PLXNB2O15031 1838 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 EML1O00423 815 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 RGS20O76081 388 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 ITGB3BPQ13352 177 aaPredicted RBP16.22■□□□□ 0.19
COL9A1-207ENST00000486080 ISM2Q6H9L7 571 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 RNF214Q8ND24 703 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 SHCBP1Q8NEM2 672 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 DNERQ8NFT8 737 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 TUBE1Q9UJT0 475 aa16.22■□□□□ 0.19
COL9A1-207ENST00000486080 DOCK5Q9H7D0 1870 aa16.21■□□□□ 0.19
COL9A1-207ENST00000486080 CHMP2AO43633 222 aa16.21■□□□□ 0.19
COL9A1-207ENST00000486080 GAS7O60861 476 aa16.21■□□□□ 0.19
COL9A1-207ENST00000486080 CCT6AP40227 531 aaKnown RBP16.21■□□□□ 0.19
COL9A1-207ENST00000486080 ALDH5A1P51649 535 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-207ENST00000486080 GRM1Q13255 1194 aa16.21■□□□□ 0.19
COL9A1-207ENST00000486080 KCTD2Q14681 263 aa16.21■□□□□ 0.19
COL9A1-207ENST00000486080 CCDC102AQ96A19 550 aa16.21■□□□□ 0.19
COL9A1-207ENST00000486080 HOOK1Q9UJC3 728 aaKnown RBP16.21■□□□□ 0.19
COL9A1-207ENST00000486080 DDX39AO00148 427 aaKnown RBP16.2■□□□□ 0.18
COL9A1-207ENST00000486080 DHX15O43143 795 aaKnown RBP16.2■□□□□ 0.18
COL9A1-207ENST00000486080 MED24O75448 989 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 FCER1AP12319 257 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 CCNA1P78396 465 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 SEMA3FQ13275 785 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 PPP2R5CQ13362 524 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 ANO6Q4KMQ2 910 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 TMEM119Q4V9L6 283 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 KCNK18Q7Z418 384 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 IFNL1Q8IU54 200 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 CDK5RAP3Q96JB5 506 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 FGD4Q96M96 766 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 INPP4AQ96PE3 977 aaPredicted RBP16.2■□□□□ 0.18
COL9A1-207ENST00000486080 IWS1Q96ST2 819 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 BLZF1Q9H2G9 400 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 UNC45AQ9H3U1 944 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 BLOC1S4Q9NUP1 217 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 CPA4Q9UI42 421 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 MCM3APO60318 1980 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 PLXNA1Q9UIW2 1896 aa16.2■□□□□ 0.18
COL9A1-207ENST00000486080 ADGRA2Q96PE1 1338 aa16.19■□□□□ 0.18
COL9A1-207ENST00000486080 DNAJC25-GNG10A0A024R161 153 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms