RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 MEFVO15553 781 aaPredicted RBP5.57□□□□□ -1.52
COPA-204ENST00000481522 SRGAP3O43295 1099 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 NPHS1O60500 1241 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 FZD7O75084 574 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 PLA2G1BP04054 148 aaKnown RBP5.57□□□□□ -1.52
COPA-204ENST00000481522 CYBBP04839 570 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 CNR2P34972 360 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 KLF10Q13118 480 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 IQCEQ6IPM2 695 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 PAQR3Q6TCH7 311 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 SAPCD2Q86UD0 394 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 LZTR1Q8N653 840 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 PMFBP1Q8TBY8 1022 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 USP33Q8TEY7 942 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 CCDC140Q96MF4 163 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 RBM15Q96T37 977 aaKnown RBP eCLIP5.57□□□□□ -1.52
COPA-204ENST00000481522 MMP19Q99542 508 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 C11orf21Q9P2W6 132 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 GULP1Q9UBP9 304 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 DBR1Q9UK59 544 aaKnown RBP5.57□□□□□ -1.52
COPA-204ENST00000481522 DUSP10Q9Y6W6 482 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 PMF1-BGLAPU3KQ54 211 aa5.57□□□□□ -1.52
COPA-204ENST00000481522 C7orf72A4D263 438 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 SH3D21A4FU49 640 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 MYO1BO43795 1136 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 DBHP09172 617 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 PRELPP51888 382 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 GFRA1P56159 465 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 PPP2R2AP63151 447 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 FOXO4P98177 505 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 KCNAB2Q13303 367 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 SERINC3Q13530 473 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 E4F1Q66K89 784 aaPredicted RBP5.56□□□□□ -1.52
COPA-204ENST00000481522 PPIL6Q8IXY8 311 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 LRRC47Q8N1G4 583 aaKnown RBP5.56□□□□□ -1.52
COPA-204ENST00000481522 NLGN2Q8NFZ4 835 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 DDX1Q92499 740 aaKnown RBP5.56□□□□□ -1.52
COPA-204ENST00000481522 SGSM3Q96HU1 749 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 NUDT5Q9UKK9 219 aa5.56□□□□□ -1.52
COPA-204ENST00000481522 A0A1W2PQU0 124 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 SCG5P05408 212 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 HSP90AA2PQ14568 343 aaPredicted RBP5.55□□□□□ -1.52
COPA-204ENST00000481522 PRSS53Q2L4Q9 553 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 MTERF2Q49AM1 385 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 SPRED1Q7Z699 444 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 NPLOC4Q8TAT6 608 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 ZNF526Q8TF50 670 aaPredicted RBP5.55□□□□□ -1.52
COPA-204ENST00000481522 FRS2Q8WU20 508 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 KCTD13Q8WZ19 329 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 DIO2Q92813 273 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 AARSD1Q9BTE6 412 aaKnown RBP5.55□□□□□ -1.52
COPA-204ENST00000481522 BTG4Q9NY30 223 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 USP35Q9P2H5 1018 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 ING1Q9UK53 422 aaPredicted RBP5.55□□□□□ -1.52
COPA-204ENST00000481522 MSRB2Q9Y3D2 182 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 PCSK5Q92824 1860 aa5.55□□□□□ -1.52
COPA-204ENST00000481522 PTPRMP28827 1452 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 PDPK1O15530 556 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 NOBOXO60393 691 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 GJA9P57773 515 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 C1QTNF8P60827 252 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 RPL11P62913 178 aaKnown RBP5.54□□□□□ -1.52
COPA-204ENST00000481522 HTRA3P83110 453 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 SF1Q15637 639 aaKnown RBP5.54□□□□□ -1.52
COPA-204ENST00000481522 SMN1Q16637 294 aaKnown RBP5.54□□□□□ -1.52
COPA-204ENST00000481522 ACBD5Q5T8D3 534 aaPredicted RBP5.54□□□□□ -1.52
COPA-204ENST00000481522 MBLAC2Q68D91 279 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 WWC2Q6AWC2 1192 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 TTC9BQ8N6N2 239 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 TMEM145Q8NBT3 493 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 ZNF669Q96BR6 464 aaPredicted RBP5.54□□□□□ -1.52
COPA-204ENST00000481522 C8orf49Q96NF6 230 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 IER2Q9BTL4 223 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 LNPKQ9C0E8 428 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 CCDC113Q9H0I3 377 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.54□□□□□ -1.52
COPA-204ENST00000481522 MARCH2Q9P0N8 246 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 FAN1Q9Y2M0 1017 aa5.54□□□□□ -1.52
COPA-204ENST00000481522 KRTAP29-1A8MX34 341 aaPredicted RBP5.53□□□□□ -1.52
COPA-204ENST00000481522 F8W031 263 aaPredicted RBP5.53□□□□□ -1.52
COPA-204ENST00000481522 FUCA1P04066 466 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 GLI4P10075 376 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 FBLN1P23142 703 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 GTF2A2P52657 109 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 MAP4K2Q12851 820 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 IFRD2Q12894 506 aaPredicted RBP5.53□□□□□ -1.52
COPA-204ENST00000481522 RASGRF1Q13972 1273 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 INF2Q27J81 1249 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 USP51Q70EK9 711 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 LRP10Q7Z4F1 713 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 NETO2Q8NC67 525 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 MKL1Q969V6 931 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 PEX11GQ96HA9 241 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 SAMD11Q96NU1 681 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 SRPK1Q96SB4 655 aaKnown RBP5.53□□□□□ -1.52
COPA-204ENST00000481522 OSBPL2Q9H1P3 480 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 PTPRTO14522 1441 aa5.53□□□□□ -1.52
COPA-204ENST00000481522 GAPVD1Q14C86 1478 aa5.52□□□□□ -1.53
COPA-204ENST00000481522 TRAV20A0A0B4J274 112 aa5.52□□□□□ -1.53
COPA-204ENST00000481522 ATF2P15336 505 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms