RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 SREBF1P36956 1147 aa13.97□□□□□ -0.17
TRA2B-212ENST00000480461 PDE4DQ08499 809 aa13.97□□□□□ -0.17
TRA2B-212ENST00000480461 AP3B2Q13367 1082 aa13.97□□□□□ -0.17
TRA2B-212ENST00000480461 PWP2Q15269 919 aaKnown RBP13.97□□□□□ -0.17
TRA2B-212ENST00000480461 STXBP2Q15833 593 aa13.97□□□□□ -0.17
TRA2B-212ENST00000480461 PCNX4Q63HM2 1172 aa13.97□□□□□ -0.17
TRA2B-212ENST00000480461 FBXO16Q8IX29 292 aaPredicted RBP13.97□□□□□ -0.17
TRA2B-212ENST00000480461 DIS3L2Q8IYB7 885 aaKnown RBP13.97□□□□□ -0.17
TRA2B-212ENST00000480461 BICD2Q8TD16 824 aa13.97□□□□□ -0.17
TRA2B-212ENST00000480461 LBHD1Q9BQE6 289 aaPredicted RBP13.97□□□□□ -0.17
TRA2B-212ENST00000480461 ABHD16BQ9H3Z7 469 aa13.97□□□□□ -0.17
TRA2B-212ENST00000480461 PLXNA1Q9UIW2 1896 aa13.97□□□□□ -0.17
TRA2B-212ENST00000480461 ARIH2O95376 493 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 CYP3A4P08684 503 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 SYT1P21579 422 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 KRT2P35908 639 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 ADCYAP1R1P41586 468 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 IRX5P78411 483 aaPredicted RBP13.96□□□□□ -0.17
TRA2B-212ENST00000480461 ARHGAP4P98171 946 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 SP2Q02086 613 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 SEMA3FQ13275 785 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 CCDC144BQ3MJ40 725 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 GJC2Q5T442 439 aaPredicted RBP13.96□□□□□ -0.17
TRA2B-212ENST00000480461 ANO1Q5XXA6 986 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 CCDC62Q6P9F0 684 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 TBCKQ8TEA7 893 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 LENG1Q96BZ8 264 aaPredicted RBP13.96□□□□□ -0.17
TRA2B-212ENST00000480461 WDR11Q9BZH6 1224 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 RBM19Q9Y4C8 960 aaKnown RBP13.96□□□□□ -0.17
TRA2B-212ENST00000480461 UBIAD1Q9Y5Z9 338 aa13.96□□□□□ -0.17
TRA2B-212ENST00000480461 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 FAM86B1E9PN63 330 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 FAM86B2P0C5J1 330 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 SMPD1P17405 629 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 U2AF2P26368 475 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRA2B-212ENST00000480461 CCND2P30279 289 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 TRIM29Q14134 588 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 INF2Q27J81 1249 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 SEPT14Q6ZU15 432 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 PIK3AP1Q6ZUJ8 805 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 INPP4AQ96PE3 977 aaPredicted RBP13.95□□□□□ -0.18
TRA2B-212ENST00000480461 SEMA6BQ9H3T3 888 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 VTA1Q9NP79 307 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 NRBP1Q9UHY1 535 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 ZHX1Q9UKY1 873 aaPredicted RBP13.95□□□□□ -0.18
TRA2B-212ENST00000480461 CNPY2Q9Y2B0 182 aa13.95□□□□□ -0.18
TRA2B-212ENST00000480461 IGLV3-22A0A075B6J6 115 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 MEIS1O00470 390 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 ATP9AO75110 1047 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 ARP10275 920 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 CNGA1P29973 690 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 CIITAP33076 1130 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 TOB1P50616 345 aaPredicted RBP13.94□□□□□ -0.18
TRA2B-212ENST00000480461 PKP1Q13835 747 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 LY6KQ17RY6 165 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 MCTP2Q6DN12 878 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 IQSEC1Q6DN90 963 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 XRRA1Q6P2D8 792 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 KRT25Q7Z3Z0 450 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 MYLIPQ8WY64 445 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 COPS5Q92905 334 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 LENG9Q96B70 501 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 UIMC1Q96RL1 719 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 MXRA8Q9BRK3 442 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 SENP6Q9GZR1 1112 aaPredicted RBP13.94□□□□□ -0.18
TRA2B-212ENST00000480461 TTYH1Q9H313 450 aaPredicted RBP13.94□□□□□ -0.18
TRA2B-212ENST00000480461 FOXP1Q9H334 677 aaPredicted RBP13.94□□□□□ -0.18
TRA2B-212ENST00000480461 DDX41Q9UJV9 622 aaKnown RBP13.94□□□□□ -0.18
TRA2B-212ENST00000480461 MTMR6Q9Y217 621 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 GNEQ9Y223 722 aaKnown RBP13.94□□□□□ -0.18
TRA2B-212ENST00000480461 TELO2Q9Y4R8 837 aa13.94□□□□□ -0.18
TRA2B-212ENST00000480461 MCM3APO60318 1980 aa13.93□□□□□ -0.18
TRA2B-212ENST00000480461 CYP3A7-CYP3A51PA0A087WV96 503 aa13.93□□□□□ -0.18
TRA2B-212ENST00000480461 B4DLN1 442 aa13.93□□□□□ -0.18
TRA2B-212ENST00000480461 CTAGE5O15320 804 aa13.93□□□□□ -0.18
TRA2B-212ENST00000480461 SEPT4O43236 478 aa13.93□□□□□ -0.18
TRA2B-212ENST00000480461 COL9A1P20849 921 aa13.93□□□□□ -0.18
TRA2B-212ENST00000480461 CYP3A7P24462 503 aa13.93□□□□□ -0.18
TRA2B-212ENST00000480461 ICAM3P32942 547 aa13.93□□□□□ -0.18
TRA2B-212ENST00000480461 USP11P51784 963 aa13.93□□□□□ -0.18
TRA2B-212ENST00000480461 NONOQ15233 471 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRA2B-212ENST00000480461 SYMPKQ92797 1274 aaKnown RBP13.93□□□□□ -0.18
TRA2B-212ENST00000480461 JADE2Q9NQC1 790 aa13.93□□□□□ -0.18
TRA2B-212ENST00000480461 FAM184BQ9ULE4 1060 aa13.93□□□□□ -0.18
TRA2B-212ENST00000480461 CCDC194A0A1B0GVG4 234 aa13.92□□□□□ -0.18
TRA2B-212ENST00000480461 TDP2O95551 362 aa13.92□□□□□ -0.18
TRA2B-212ENST00000480461 TXNP10599 105 aaKnown RBP13.92□□□□□ -0.18
TRA2B-212ENST00000480461 ATN1P54259 1190 aaPredicted RBP13.92□□□□□ -0.18
TRA2B-212ENST00000480461 TNFAIP2Q03169 654 aa13.92□□□□□ -0.18
TRA2B-212ENST00000480461 SHHQ15465 462 aa13.92□□□□□ -0.18
TRA2B-212ENST00000480461 CEP55Q53EZ4 464 aa13.92□□□□□ -0.18
TRA2B-212ENST00000480461 C9orf50Q5SZB4 431 aa13.92□□□□□ -0.18
TRA2B-212ENST00000480461 NOSTRINQ8IVI9 506 aa13.92□□□□□ -0.18
TRA2B-212ENST00000480461 MBOAT7Q96N66 472 aa13.92□□□□□ -0.18
TRA2B-212ENST00000480461 KCNH7Q9NS40 1196 aa13.92□□□□□ -0.18
TRA2B-212ENST00000480461 DDX20Q9UHI6 824 aaKnown RBP13.92□□□□□ -0.18
TRA2B-212ENST00000480461 ZDHHC9Q9Y397 364 aa13.92□□□□□ -0.18
TRA2B-212ENST00000480461 KIF3AQ9Y496 699 aa13.92□□□□□ -0.18
TRA2B-212ENST00000480461 MYADML2A6NDP7 307 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 H3BQV1 296 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms