RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 SPATA33Q96N06 139 aa26.38■■□□□ 1.81
C9orf3-216ENST00000478603 MTA3Q9BTC8 594 aa26.38■■□□□ 1.81
C9orf3-216ENST00000478603 PRDM12Q9H4Q4 367 aa26.38■■□□□ 1.81
C9orf3-216ENST00000478603 MYOGP15173 224 aa26.37■■□□□ 1.81
C9orf3-216ENST00000478603 RFC2P35250 354 aa26.37■■□□□ 1.81
C9orf3-216ENST00000478603 KIAA0753Q2KHM9 967 aa26.37■■□□□ 1.81
C9orf3-216ENST00000478603 CENPQQ7L2Z9 268 aaPredicted RBP26.37■■□□□ 1.81
C9orf3-216ENST00000478603 SRBD1Q8N5C6 995 aaKnown RBP26.37■■□□□ 1.81
C9orf3-216ENST00000478603 C7orf31Q8N865 590 aa26.37■■□□□ 1.81
C9orf3-216ENST00000478603 DHX38Q92620 1227 aaKnown RBP26.37■■□□□ 1.81
C9orf3-216ENST00000478603 GTF2IRD1Q9UHL9 959 aa26.37■■□□□ 1.81
C9orf3-216ENST00000478603 F2P00734 622 aa26.36■■□□□ 1.81
C9orf3-216ENST00000478603 ATP2A2P16615 1042 aaKnown RBP26.36■■□□□ 1.81
C9orf3-216ENST00000478603 MRPS9P82933 396 aaKnown RBP26.36■■□□□ 1.81
C9orf3-216ENST00000478603 BMP2KLQ5H9B9 411 aa26.36■■□□□ 1.81
C9orf3-216ENST00000478603 TMTC2Q8N394 836 aa26.36■■□□□ 1.81
C9orf3-216ENST00000478603 KATNAL1Q9BW62 490 aa26.36■■□□□ 1.81
C9orf3-216ENST00000478603 FTOQ9C0B1 505 aaKnown RBP eCLIP26.36■■□□□ 1.81
C9orf3-216ENST00000478603 BCAS3Q9H6U6 928 aa26.36■■□□□ 1.81
C9orf3-216ENST00000478603 FRMPD4Q14CM0 1322 aa26.36■■□□□ 1.81
C9orf3-216ENST00000478603 RBAK-RBAKDNI3L0D1 243 aa26.35■■□□□ 1.81
C9orf3-216ENST00000478603 HAS3O00219 553 aa26.35■■□□□ 1.81
C9orf3-216ENST00000478603 HOXD8P13378 290 aaPredicted RBP26.35■■□□□ 1.81
C9orf3-216ENST00000478603 USP17L6PQ6QN14 398 aa26.35■■□□□ 1.81
C9orf3-216ENST00000478603 USP38Q8NB14 1042 aa26.35■■□□□ 1.81
C9orf3-216ENST00000478603 CAGE1Q8TC20 777 aa26.35■■□□□ 1.81
C9orf3-216ENST00000478603 SLC28A3Q9HAS3 691 aa26.35■■□□□ 1.81
C9orf3-216ENST00000478603 RTEL1Q9NZ71 1219 aa26.35■■□□□ 1.81
C9orf3-216ENST00000478603 SEC63Q9UGP8 760 aaKnown RBP26.35■■□□□ 1.81
C9orf3-216ENST00000478603 CUL9Q8IWT3 2517 aa26.34■■□□□ 1.81
C9orf3-216ENST00000478603 PPFIA4O75335 1185 aa26.34■■□□□ 1.81
C9orf3-216ENST00000478603 TGFB3P10600 412 aa26.34■■□□□ 1.81
C9orf3-216ENST00000478603 ACTN1P12814 892 aa26.34■■□□□ 1.81
C9orf3-216ENST00000478603 SMARCA1P28370 1054 aa26.34■■□□□ 1.81
C9orf3-216ENST00000478603 LIFRP42702 1097 aa26.34■■□□□ 1.81
C9orf3-216ENST00000478603 GNAQP50148 359 aa26.34■■□□□ 1.81
C9orf3-216ENST00000478603 CCDC155Q8N6L0 562 aa26.34■■□□□ 1.81
C9orf3-216ENST00000478603 SMARCC2Q8TAQ2 1214 aa26.34■■□□□ 1.81
C9orf3-216ENST00000478603 GAS2L1Q99501 681 aaPredicted RBP26.34■■□□□ 1.81
C9orf3-216ENST00000478603 LZTS2Q9BRK4 669 aa26.34■■□□□ 1.81
C9orf3-216ENST00000478603 MLXIPQ9HAP2 919 aa26.34■■□□□ 1.81
C9orf3-216ENST00000478603 CHD9Q3L8U1 2897 aa26.34■■□□□ 1.81
C9orf3-216ENST00000478603 hCG_1642624A0A1W2PR95 340 aa26.33■■□□□ 1.81
C9orf3-216ENST00000478603 ZNF200P98182 395 aaPredicted RBP26.33■■□□□ 1.81
C9orf3-216ENST00000478603 GPNMBQ14956 572 aa26.33■■□□□ 1.81
C9orf3-216ENST00000478603 AFAP1L1Q8TED9 768 aa26.33■■□□□ 1.81
C9orf3-216ENST00000478603 COL25A1Q9BXS0 654 aaPredicted RBP26.33■■□□□ 1.81
C9orf3-216ENST00000478603 PCDHA11Q9Y5I1 949 aa26.33■■□□□ 1.81
C9orf3-216ENST00000478603 PTPRSQ13332 1948 aa26.32■■□□□ 1.8
C9orf3-216ENST00000478603 MEIS2O14770 477 aa26.32■■□□□ 1.8
C9orf3-216ENST00000478603 SEMA3FQ13275 785 aa26.32■■□□□ 1.8
C9orf3-216ENST00000478603 HIC1Q14526 733 aa26.32■■□□□ 1.8
C9orf3-216ENST00000478603 CCDC82Q8N4S0 544 aa26.32■■□□□ 1.8
C9orf3-216ENST00000478603 CUL5Q93034 780 aa26.32■■□□□ 1.8
C9orf3-216ENST00000478603 INPP4AQ96PE3 977 aaPredicted RBP26.32■■□□□ 1.8
C9orf3-216ENST00000478603 C16orf70Q9BSU1 422 aa26.32■■□□□ 1.8
C9orf3-216ENST00000478603 SLC12A7Q9Y666 1083 aa26.32■■□□□ 1.8
C9orf3-216ENST00000478603 CALM1P0DP23 149 aa26.31■■□□□ 1.8
C9orf3-216ENST00000478603 CALM2P0DP24 149 aa26.31■■□□□ 1.8
C9orf3-216ENST00000478603 CALM3P0DP25 149 aa26.31■■□□□ 1.8
C9orf3-216ENST00000478603 CKBP12277 381 aa26.31■■□□□ 1.8
C9orf3-216ENST00000478603 SELPP16109 830 aa26.31■■□□□ 1.8
C9orf3-216ENST00000478603 ADGRE1Q14246 886 aa26.31■■□□□ 1.8
C9orf3-216ENST00000478603 GNPTABQ3T906 1256 aa26.31■■□□□ 1.8
C9orf3-216ENST00000478603 PPP2R2DQ66LE6 453 aa26.31■■□□□ 1.8
C9orf3-216ENST00000478603 LRRC8DQ7L1W4 858 aa26.31■■□□□ 1.8
C9orf3-216ENST00000478603 PPM1EQ8WY54 764 aa26.31■■□□□ 1.8
C9orf3-216ENST00000478603 WNT8BQ93098 351 aa26.31■■□□□ 1.8
C9orf3-216ENST00000478603 PIK3CDO00329 1044 aa26.3■■□□□ 1.8
C9orf3-216ENST00000478603 ICAM3P32942 547 aa26.3■■□□□ 1.8
C9orf3-216ENST00000478603 MICU3Q86XE3 530 aa26.3■■□□□ 1.8
C9orf3-216ENST00000478603 FANCBQ8NB91 859 aa26.3■■□□□ 1.8
C9orf3-216ENST00000478603 SPATA31C2B4DYI2 1134 aa26.29■■□□□ 1.8
C9orf3-216ENST00000478603 STAM2O75886 525 aa26.29■■□□□ 1.8
C9orf3-216ENST00000478603 RBL2Q08999 1139 aa26.29■■□□□ 1.8
C9orf3-216ENST00000478603 PTK7Q13308 1070 aa26.29■■□□□ 1.8
C9orf3-216ENST00000478603 RNF20Q5VTR2 975 aa26.29■■□□□ 1.8
C9orf3-216ENST00000478603 TMTC3Q6ZXV5 915 aa26.29■■□□□ 1.8
C9orf3-216ENST00000478603 CYFIP1Q7L576 1253 aa26.29■■□□□ 1.8
C9orf3-216ENST00000478603 TCEANC2Q96MN5 208 aa26.29■■□□□ 1.8
C9orf3-216ENST00000478603 SLC9A7Q96T83 725 aa26.29■■□□□ 1.8
C9orf3-216ENST00000478603 TELO2Q9Y4R8 837 aa26.29■■□□□ 1.8
C9orf3-216ENST00000478603 FIBPO43427 364 aa26.28■■□□□ 1.8
C9orf3-216ENST00000478603 NBNO60934 754 aa26.28■■□□□ 1.8
C9orf3-216ENST00000478603 LGALS2P05162 132 aa26.28■■□□□ 1.8
C9orf3-216ENST00000478603 IGFBP4P22692 258 aa26.28■■□□□ 1.8
C9orf3-216ENST00000478603 TRIM71Q2Q1W2 868 aaKnown RBP26.28■■□□□ 1.8
C9orf3-216ENST00000478603 PCNX4Q63HM2 1172 aa26.28■■□□□ 1.8
C9orf3-216ENST00000478603 SGMS1Q86VZ5 419 aa26.28■■□□□ 1.8
C9orf3-216ENST00000478603 NEK1Q96PY6 1258 aa26.28■■□□□ 1.8
C9orf3-216ENST00000478603 PSTPIP2Q9H939 334 aa26.28■■□□□ 1.8
C9orf3-216ENST00000478603 CHD7Q9P2D1 2997 aa26.28■■□□□ 1.8
C9orf3-216ENST00000478603 H3BRB1 525 aa26.27■■□□□ 1.8
C9orf3-216ENST00000478603 NOP56O00567 594 aaKnown RBP26.27■■□□□ 1.8
C9orf3-216ENST00000478603 CA3P07451 260 aa26.27■■□□□ 1.8
C9orf3-216ENST00000478603 NEDD9Q14511 834 aa26.27■■□□□ 1.8
C9orf3-216ENST00000478603 UBE2SQ16763 222 aa26.27■■□□□ 1.8
C9orf3-216ENST00000478603 TCTN1Q2MV58 587 aa26.27■■□□□ 1.8
C9orf3-216ENST00000478603 METTL7BQ6UX53 244 aa26.27■■□□□ 1.8
C9orf3-216ENST00000478603 RASEFQ8IZ41 740 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms