RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 TCTN1Q2MV58 587 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 TRIM71Q2Q1W2 868 aaKnown RBP19.41■□□□□ 0.7
TRIM13-208ENST00000478111 TRAF7Q6Q0C0 670 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 LRRC8DQ7L1W4 858 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 SAMD3Q8N6K7 520 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 WNT8BQ93098 351 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 ALG1Q9BT22 464 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 MTCH2Q9Y6C9 303 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 WDR5P61964 334 aaKnown RBP19.4■□□□□ 0.7
TRIM13-208ENST00000478111 MFSD10Q14728 455 aa19.4■□□□□ 0.7
TRIM13-208ENST00000478111 KIAA0753Q2KHM9 967 aa19.4■□□□□ 0.7
TRIM13-208ENST00000478111 HSDL1Q3SXM5 330 aa19.4■□□□□ 0.7
TRIM13-208ENST00000478111 CELF3Q5SZQ8 465 aaKnown RBP19.4■□□□□ 0.7
TRIM13-208ENST00000478111 SPRED2Q7Z698 418 aa19.4■□□□□ 0.7
TRIM13-208ENST00000478111 HOMER1Q86YM7 354 aa19.4■□□□□ 0.7
TRIM13-208ENST00000478111 C7orf31Q8N865 590 aa19.4■□□□□ 0.7
TRIM13-208ENST00000478111 E7EWF7 191 aa19.39■□□□□ 0.69
TRIM13-208ENST00000478111 IFIT3O14879 490 aaKnown RBP19.39■□□□□ 0.69
TRIM13-208ENST00000478111 PPFIA4O75335 1185 aa19.39■□□□□ 0.69
TRIM13-208ENST00000478111 ZNF200P98182 395 aaPredicted RBP19.39■□□□□ 0.69
TRIM13-208ENST00000478111 TRDNQ13061 729 aa19.39■□□□□ 0.69
TRIM13-208ENST00000478111 PTK7Q13308 1070 aa19.39■□□□□ 0.69
TRIM13-208ENST00000478111 KCNV1Q6PIU1 500 aa19.39■□□□□ 0.69
TRIM13-208ENST00000478111 TMCO2Q7Z6W1 182 aaPredicted RBP19.39■□□□□ 0.69
TRIM13-208ENST00000478111 MICALL1Q8N3F8 863 aa19.39■□□□□ 0.69
TRIM13-208ENST00000478111 GPKOWQ92917 476 aaPredicted RBP eCLIP19.39■□□□□ 0.69
TRIM13-208ENST00000478111 ZFP91Q96JP5 570 aaPredicted RBP19.39■□□□□ 0.69
TRIM13-208ENST00000478111 KATNAL1Q9BW62 490 aa19.39■□□□□ 0.69
TRIM13-208ENST00000478111 BCAS3Q9H6U6 928 aa19.39■□□□□ 0.69
TRIM13-208ENST00000478111 U3KPZ7 1027 aaPredicted RBP19.39■□□□□ 0.69
TRIM13-208ENST00000478111 SORBS3O60504 671 aa19.38■□□□□ 0.69
TRIM13-208ENST00000478111 GGPS1O95749 300 aa19.38■□□□□ 0.69
TRIM13-208ENST00000478111 UBA1P22314 1058 aaKnown RBP19.38■□□□□ 0.69
TRIM13-208ENST00000478111 COL4A4P53420 1690 aaPredicted RBP19.38■□□□□ 0.69
TRIM13-208ENST00000478111 MBTPS1Q14703 1052 aa19.38■□□□□ 0.69
TRIM13-208ENST00000478111 KRT40Q6A162 431 aa19.38■□□□□ 0.69
TRIM13-208ENST00000478111 ADAMTS19Q8TE59 1207 aa19.38■□□□□ 0.69
TRIM13-208ENST00000478111 ARNTL2Q8WYA1 636 aa19.38■□□□□ 0.69
TRIM13-208ENST00000478111 C16orf70Q9BSU1 422 aa19.38■□□□□ 0.69
TRIM13-208ENST00000478111 SUPT16HQ9Y5B9 1047 aaKnown RBP19.38■□□□□ 0.69
TRIM13-208ENST00000478111 PNMA6FA0A0J9YX94 578 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 LCHNA4D1U4 455 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 KIF28PB7ZC32 967 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 GCOM1H8Y6P7 765 aaPredicted RBP19.37■□□□□ 0.69
TRIM13-208ENST00000478111 PARNO95453 639 aaKnown RBP19.37■□□□□ 0.69
TRIM13-208ENST00000478111 POLR2MP0CAP2 368 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 TGFB3P10600 412 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 ANTXR2P58335 489 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 DEFB103AP81534 67 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 TFF2Q03403 129 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 ZNF618Q5T7W0 954 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 CNKSR3Q6P9H4 555 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 IGDCC4Q8TDY8 1250 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 RUFY2Q8WXA3 655 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 SPATA33Q96N06 139 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 MICAL3Q7RTP6 2002 aa19.37■□□□□ 0.69
TRIM13-208ENST00000478111 FRMPD4Q14CM0 1322 aa19.36■□□□□ 0.69
TRIM13-208ENST00000478111 SGSM2O43147 1006 aa19.36■□□□□ 0.69
TRIM13-208ENST00000478111 TLL1O43897 1013 aa19.36■□□□□ 0.69
TRIM13-208ENST00000478111 LPXNO60711 386 aa19.36■□□□□ 0.69
TRIM13-208ENST00000478111 BMP1P13497 986 aa19.36■□□□□ 0.69
TRIM13-208ENST00000478111 CCND2P30279 289 aa19.36■□□□□ 0.69
TRIM13-208ENST00000478111 KCNJ6P48051 423 aa19.36■□□□□ 0.69
TRIM13-208ENST00000478111 MRPS9P82933 396 aaKnown RBP19.36■□□□□ 0.69
TRIM13-208ENST00000478111 WTAPQ15007 396 aa19.36■□□□□ 0.69
TRIM13-208ENST00000478111 FCHSD1Q86WN1 690 aa19.36■□□□□ 0.69
TRIM13-208ENST00000478111 NCOA7Q8NI08 942 aa19.36■□□□□ 0.69
TRIM13-208ENST00000478111 TRAF1Q13077 416 aa19.35■□□□□ 0.69
TRIM13-208ENST00000478111 GRB10Q13322 594 aa19.35■□□□□ 0.69
TRIM13-208ENST00000478111 MB21D2Q8IYB1 491 aaPredicted RBP19.35■□□□□ 0.69
TRIM13-208ENST00000478111 MAP4K1Q92918 833 aa19.35■□□□□ 0.69
TRIM13-208ENST00000478111 UHRF1Q96T88 793 aaPredicted RBP19.35■□□□□ 0.69
TRIM13-208ENST00000478111 TSPYL2Q9H2G4 693 aaPredicted RBP19.35■□□□□ 0.69
TRIM13-208ENST00000478111 SIP14410 1827 aa19.35■□□□□ 0.69
TRIM13-208ENST00000478111 ABHD14A-ACY1A0A1B0GW23 586 aa19.34■□□□□ 0.69
TRIM13-208ENST00000478111 ERICH2A1L162 156 aa19.34■□□□□ 0.69
TRIM13-208ENST00000478111 GTPBP6O43824 516 aaPredicted RBP19.34■□□□□ 0.69
TRIM13-208ENST00000478111 GJB5O95377 273 aa19.34■□□□□ 0.69
TRIM13-208ENST00000478111 HOXC8P31273 242 aa19.34■□□□□ 0.69
TRIM13-208ENST00000478111 SEMA3FQ13275 785 aa19.34■□□□□ 0.69
TRIM13-208ENST00000478111 MKRN4PQ13434 485 aaPredicted RBP19.34■□□□□ 0.69
TRIM13-208ENST00000478111 RALYLQ86SE5 291 aaKnown RBP19.34■□□□□ 0.69
TRIM13-208ENST00000478111 SERINC5Q86VE9 423 aa19.34■□□□□ 0.69
TRIM13-208ENST00000478111 KAT6AQ92794 2004 aa19.34■□□□□ 0.69
TRIM13-208ENST00000478111 ICAM3P32942 547 aa19.33■□□□□ 0.68
TRIM13-208ENST00000478111 KCNQ1P51787 676 aa19.33■□□□□ 0.68
TRIM13-208ENST00000478111 INPP4AQ96PE3 977 aaPredicted RBP19.33■□□□□ 0.68
TRIM13-208ENST00000478111 MLXIPQ9HAP2 919 aa19.33■□□□□ 0.68
TRIM13-208ENST00000478111 SPATA31C2B4DYI2 1134 aa19.32■□□□□ 0.68
TRIM13-208ENST00000478111 H3BRB1 525 aa19.32■□□□□ 0.68
TRIM13-208ENST00000478111 LGALS2P05162 132 aa19.32■□□□□ 0.68
TRIM13-208ENST00000478111 COL9A3Q14050 684 aaPredicted RBP19.32■□□□□ 0.68
TRIM13-208ENST00000478111 IKBKEQ14164 716 aa19.32■□□□□ 0.68
TRIM13-208ENST00000478111 SART3Q15020 963 aaKnown RBP19.32■□□□□ 0.68
TRIM13-208ENST00000478111 CATIPQ7Z7H3 387 aa19.32■□□□□ 0.68
TRIM13-208ENST00000478111 PIBF1Q8WXW3 757 aa19.32■□□□□ 0.68
TRIM13-208ENST00000478111 NECAB3Q96P71 396 aaPredicted RBP19.32■□□□□ 0.68
TRIM13-208ENST00000478111 MAP3K14Q99558 947 aa19.32■□□□□ 0.68
TRIM13-208ENST00000478111 RAD9AQ99638 391 aa19.32■□□□□ 0.68
TRIM13-208ENST00000478111 ZBED2Q9BTP6 218 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms