RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CCDC34Q96HJ3 373 aa32.46■■■□□ 2.79
VEGFA-211ENST00000476772 NUDT12Q9BQG2 462 aa32.46■■■□□ 2.79
VEGFA-211ENST00000476772 A0A087WWV3 80 aa32.46■■■□□ 2.79
VEGFA-211ENST00000476772 AFMP43652 599 aa32.46■■■□□ 2.79
VEGFA-211ENST00000476772 CALML4Q96GE6 196 aa32.46■■■□□ 2.79
VEGFA-211ENST00000476772 WDR11Q9BZH6 1224 aa32.46■■■□□ 2.79
VEGFA-211ENST00000476772 VAV3Q9UKW4 847 aa32.46■■■□□ 2.79
VEGFA-211ENST00000476772 NR3C2P08235 984 aa32.45■■■□□ 2.79
VEGFA-211ENST00000476772 BCRP11274 1271 aa32.45■■■□□ 2.79
VEGFA-211ENST00000476772 CCND2P30279 289 aa32.45■■■□□ 2.79
VEGFA-211ENST00000476772 ZNF577Q9BSK1 485 aa32.45■■■□□ 2.79
VEGFA-211ENST00000476772 GRPEL1Q9HAV7 217 aa32.45■■■□□ 2.79
VEGFA-211ENST00000476772 JADE2Q9NQC1 790 aa32.45■■■□□ 2.79
VEGFA-211ENST00000476772 TUBE1Q9UJT0 475 aa32.45■■■□□ 2.79
VEGFA-211ENST00000476772 SLC10A3P09131 477 aa32.44■■■□□ 2.78
VEGFA-211ENST00000476772 CNTN2Q02246 1040 aa32.44■■■□□ 2.78
VEGFA-211ENST00000476772 GRB10Q13322 594 aa32.44■■■□□ 2.78
VEGFA-211ENST00000476772 LRCH2Q5VUJ6 765 aa32.44■■■□□ 2.78
VEGFA-211ENST00000476772 XRRA1Q6P2D8 792 aa32.44■■■□□ 2.78
VEGFA-211ENST00000476772 DHX30Q7L2E3 1194 aaKnown RBP eCLIP32.44■■■□□ 2.789e-6■■□□□ 11.5
VEGFA-211ENST00000476772 PNMA5Q96PV4 448 aa32.44■■■□□ 2.78
VEGFA-211ENST00000476772 PSMD10O75832 226 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 NCAPH2Q6IBW4 605 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 VSIG10LQ86VR7 867 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 ANKRD13CQ8N6S4 541 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 STAMQ92783 540 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 PARK7Q99497 189 aaKnown RBP32.43■■■□□ 2.78
VEGFA-211ENST00000476772 KCNH7Q9NS40 1196 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 PCDHA5Q9Y5H7 936 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 MANSC4A6NHS7 340 aaPredicted RBP32.43■■■□□ 2.78
VEGFA-211ENST00000476772 GCLCP48506 637 aaPredicted RBP32.43■■■□□ 2.78
VEGFA-211ENST00000476772 STX1AQ16623 288 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 RNF214Q8ND24 703 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 GPRC5AQ8NFJ5 357 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 DNERQ8NFT8 737 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 MTRQ99707 1265 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 MROH8Q9H579 483 aa32.43■■■□□ 2.78
VEGFA-211ENST00000476772 BIN1O00499 593 aa32.42■■■□□ 2.78
VEGFA-211ENST00000476772 MTMR1Q13613 665 aa32.42■■■□□ 2.78
VEGFA-211ENST00000476772 ANO6Q4KMQ2 910 aa32.42■■■□□ 2.78
VEGFA-211ENST00000476772 SHCBP1Q8NEM2 672 aa32.42■■■□□ 2.78
VEGFA-211ENST00000476772 CDK5RAP3Q96JB5 506 aa32.42■■■□□ 2.78
VEGFA-211ENST00000476772 PORCNQ9H237 461 aa32.42■■■□□ 2.78
VEGFA-211ENST00000476772 ABT1Q9ULW3 272 aaKnown RBP32.42■■■□□ 2.78
VEGFA-211ENST00000476772 ASTN1O14525 1302 aa32.42■■■□□ 2.78
VEGFA-211ENST00000476772 POTEB2H3BUK9 544 aa32.41■■■□□ 2.78
VEGFA-211ENST00000476772 IPO5O00410 1097 aaKnown RBP32.41■■■□□ 2.78
VEGFA-211ENST00000476772 CUEDC2Q9H467 287 aa32.41■■■□□ 2.78
VEGFA-211ENST00000476772 GAS7O60861 476 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 CASP1P29466 404 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 CCT6AP40227 531 aaKnown RBP32.4■■■□□ 2.78
VEGFA-211ENST00000476772 MRE11P49959 708 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 WDR78Q5VTH9 848 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 OTOP1Q7RTM1 612 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 AGO4Q9HCK5 861 aaKnown RBP32.4■■■□□ 2.78
VEGFA-211ENST00000476772 MORF4L1Q9UBU8 362 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 TOMM70O94826 608 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 ECM1Q16610 540 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 TMEM119Q4V9L6 283 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 MMP19Q99542 508 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 DNAJC25Q9H1X3 360 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 EFCC1Q9HA90 598 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 ANO10Q9NW15 660 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 PKD2L1Q9P0L9 805 aa32.4■■■□□ 2.78
VEGFA-211ENST00000476772 KDM3AQ9Y4C1 1321 aa32.39■■■□□ 2.78
VEGFA-211ENST00000476772 IGF2BP3O00425 579 aaKnown RBP eCLIP32.39■■■□□ 2.78
VEGFA-211ENST00000476772 ALDH5A1P51649 535 aaPredicted RBP32.39■■■□□ 2.78
VEGFA-211ENST00000476772 CCNA1P78396 465 aa32.39■■■□□ 2.78
VEGFA-211ENST00000476772 PPP2R5CQ13362 524 aa32.39■■■□□ 2.78
VEGFA-211ENST00000476772 HYIQ5T013 277 aa32.39■■■□□ 2.78
VEGFA-211ENST00000476772 FAM133AQ8N9E0 248 aa32.39■■■□□ 2.78
VEGFA-211ENST00000476772 SMARCE1Q969G3 411 aa32.39■■■□□ 2.78
VEGFA-211ENST00000476772 TEKT3Q9BXF9 490 aa32.39■■■□□ 2.78
VEGFA-211ENST00000476772 SOWAHBA6NEL2 793 aa32.38■■■□□ 2.77
VEGFA-211ENST00000476772 TMEM88BA6NKF7 163 aa32.38■■■□□ 2.77
VEGFA-211ENST00000476772 FAM155AB1AL88 458 aaPredicted RBP32.38■■■□□ 2.77
VEGFA-211ENST00000476772 DPYDQ12882 1025 aa32.38■■■□□ 2.77
VEGFA-211ENST00000476772 KCTD2Q14681 263 aa32.38■■■□□ 2.77
VEGFA-211ENST00000476772 L1TD1Q5T7N2 865 aaKnown RBP32.38■■■□□ 2.77
VEGFA-211ENST00000476772 NT5DC1Q5TFE4 455 aa32.38■■■□□ 2.77
VEGFA-211ENST00000476772 HAUS3Q68CZ6 603 aa32.38■■■□□ 2.77
VEGFA-211ENST00000476772 ERMNQ8TAM6 284 aa32.38■■■□□ 2.77
VEGFA-211ENST00000476772 IWS1Q96ST2 819 aa32.38■■■□□ 2.77
VEGFA-211ENST00000476772 RIT2Q99578 217 aa32.38■■■□□ 2.77
VEGFA-211ENST00000476772 MAGEF1Q9HAY2 307 aa32.38■■■□□ 2.77
VEGFA-211ENST00000476772 EML1O00423 815 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 SARSP49591 514 aaKnown RBP32.37■■■□□ 2.77
VEGFA-211ENST00000476772 NLRP12P59046 1061 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 ISM2Q6H9L7 571 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 SPATA20Q8TB22 786 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 INPP4AQ96PE3 977 aaPredicted RBP32.37■■■□□ 2.77
VEGFA-211ENST00000476772 BLZF1Q9H2G9 400 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 BLOC1S4Q9NUP1 217 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 KBTBD4Q9NVX7 518 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 STK17AQ9UEE5 414 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 SLC26A4O43511 780 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 CHMP2AO43633 222 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 GTPBP6O43824 516 aaPredicted RBP32.37■■■□□ 2.77
VEGFA-211ENST00000476772 MED24O75448 989 aa32.37■■■□□ 2.77
VEGFA-211ENST00000476772 ITGB3BPQ13352 177 aaPredicted RBP32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms