RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 PPFIA1Q13136 1202 aa15.56■□□□□ 0.08
RPGR-206ENST00000474584 ASTE1Q2TB18 679 aaPredicted RBP15.56■□□□□ 0.08
RPGR-206ENST00000474584 CCDC40Q4G0X9 1142 aa15.56■□□□□ 0.08
RPGR-206ENST00000474584 TMEM119Q4V9L6 283 aa15.56■□□□□ 0.08
RPGR-206ENST00000474584 COA7Q96BR5 231 aa15.56■□□□□ 0.08
RPGR-206ENST00000474584 CEP72Q9P209 647 aa15.56■□□□□ 0.08
RPGR-206ENST00000474584 BTAF1O14981 1849 aa15.56■□□□□ 0.08
RPGR-206ENST00000474584 ERCC3P19447 782 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 TNFRSF8P28908 595 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 SLC1A4P43007 532 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 TNNI2P48788 182 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 ATP2B2Q01814 1243 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 CFAP221Q4G0U5 840 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 GLE1Q53GS7 698 aaKnown RBP15.55■□□□□ 0.08
RPGR-206ENST00000474584 HAUS3Q68CZ6 603 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 SYN2Q92777 582 aaPredicted RBP15.55■□□□□ 0.08
RPGR-206ENST00000474584 GPR101Q96P66 508 aaPredicted RBP15.55■□□□□ 0.08
RPGR-206ENST00000474584 HINFPQ9BQA5 517 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 RNF14Q9UBS8 474 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 PLIN4Q96Q06 1357 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 RBAK-RBAKDNI3L0D1 243 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 SLC7A5Q01650 507 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 COASYQ13057 564 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 LRRC41Q15345 812 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 SFMBT2Q5VUG0 894 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 PPP1R18Q6NYC8 613 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 GBP6Q6ZN66 633 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 GPIHBP1Q8IV16 184 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 ANKRD13CQ8N6S4 541 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 MTMR8Q96EF0 704 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 TLR10Q9BXR5 811 aa15.55■□□□□ 0.08
RPGR-206ENST00000474584 TRAF5O00463 557 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 NCK2O43639 380 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 BUB1O43683 1085 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 SERPING1P05155 500 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 MAGEA9P43362 315 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 DNAJC21Q5F1R6 531 aaKnown RBP15.54■□□□□ 0.08
RPGR-206ENST00000474584 HGSNATQ68CP4 663 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 PPP4R3AQ6IN85 833 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 SLC51AQ86UW1 340 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 CAVIN3Q969G5 261 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 NUDT12Q9BQG2 462 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 CD209Q9NNX6 404 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 NLRC4Q9NPP4 1024 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 BMP2KQ9NSY1 1161 aaPredicted RBP15.54■□□□□ 0.08
RPGR-206ENST00000474584 PODXL2Q9NZ53 605 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 SALL4Q9UJQ4 1053 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 KDM3AQ9Y4C1 1321 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 MARCH6O60337 910 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 HSF2BPO75031 334 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 GNA14O95837 355 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 ZCWPW2Q504Y3 356 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 FAM26FQ5R3K3 315 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 KLHDC7AQ5VTJ3 777 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 ALS2CLQ60I27 953 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 KCNK18Q7Z418 384 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 GLIS3Q8NEA6 775 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 CEP63Q96MT8 703 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 SH3GL2Q99962 352 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 PLEKHA4Q9H4M7 779 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 RBM12Q9NTZ6 932 aaKnown RBP15.54■□□□□ 0.08
RPGR-206ENST00000474584 MTMR4Q9NYA4 1195 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 SMARCAL1Q9NZC9 954 aa15.54■□□□□ 0.08
RPGR-206ENST00000474584 DDX25Q9UHL0 483 aaKnown RBP15.54■□□□□ 0.08
RPGR-206ENST00000474584 ARFGEF1Q9Y6D6 1849 aa15.53■□□□□ 0.08
RPGR-206ENST00000474584 UFL1O94874 794 aa15.53■□□□□ 0.08
RPGR-206ENST00000474584 RHBDL3P58872 404 aa15.53■□□□□ 0.08
RPGR-206ENST00000474584 KCNMA1Q12791 1236 aa15.53■□□□□ 0.08
RPGR-206ENST00000474584 FAM98CQ17RN3 349 aaKnown RBP15.53■□□□□ 0.08
RPGR-206ENST00000474584 IFT20Q8IY31 132 aa15.53■□□□□ 0.08
RPGR-206ENST00000474584 LRRC47Q8N1G4 583 aaKnown RBP15.53■□□□□ 0.08
RPGR-206ENST00000474584 CNBD1Q8NA66 436 aa15.53■□□□□ 0.08
RPGR-206ENST00000474584 ARHGEF1Q92888 912 aaKnown RBP15.53■□□□□ 0.08
RPGR-206ENST00000474584 NT5C3AQ9H0P0 336 aa15.53■□□□□ 0.08
RPGR-206ENST00000474584 PANK4Q9NVE7 773 aa15.53■□□□□ 0.08
RPGR-206ENST00000474584 EHD2Q9NZN4 543 aa15.53■□□□□ 0.08
RPGR-206ENST00000474584 KIF13BQ9NQT8 1826 aa15.53■□□□□ 0.08
RPGR-206ENST00000474584 TAF1LQ8IZX4 1826 aa15.52■□□□□ 0.08
RPGR-206ENST00000474584 CORO7P57737 925 aa15.52■□□□□ 0.08
RPGR-206ENST00000474584 NNTQ13423 1086 aa15.52■□□□□ 0.08
RPGR-206ENST00000474584 MFSD14BQ5SR56 506 aa15.52■□□□□ 0.08
RPGR-206ENST00000474584 FAM83BQ5T0W9 1011 aa15.52■□□□□ 0.08
RPGR-206ENST00000474584 DNAJC19Q96DA6 116 aa15.52■□□□□ 0.08
RPGR-206ENST00000474584 FAM163AQ96GL9 167 aaPredicted RBP15.52■□□□□ 0.08
RPGR-206ENST00000474584 FAM107BQ9H098 131 aa15.52■□□□□ 0.08
RPGR-206ENST00000474584 MYH4Q9Y623 1939 aa15.52■□□□□ 0.08
RPGR-206ENST00000474584 PNMA6FA0A0J9YX94 578 aa15.52■□□□□ 0.07
RPGR-206ENST00000474584 EPB41P11171 864 aaKnown RBP15.52■□□□□ 0.07
RPGR-206ENST00000474584 IL1R1P14778 569 aa15.52■□□□□ 0.07
RPGR-206ENST00000474584 GPSM2P81274 684 aa15.52■□□□□ 0.07
RPGR-206ENST00000474584 MRPS25P82663 173 aaKnown RBP15.52■□□□□ 0.07
RPGR-206ENST00000474584 SF3B2Q13435 895 aaKnown RBP15.52■□□□□ 0.07
RPGR-206ENST00000474584 CCDC65Q8IXS2 484 aa15.52■□□□□ 0.07
RPGR-206ENST00000474584 RPGRQ92834 1020 aaKnown RBP15.52■□□□□ 0.07
RPGR-206ENST00000474584 CUL5Q93034 780 aa15.52■□□□□ 0.07
RPGR-206ENST00000474584 LSM14BQ9BX40 385 aaKnown RBP15.52■□□□□ 0.07
RPGR-206ENST00000474584 CAPS2Q9BXY5 557 aa15.52■□□□□ 0.07
RPGR-206ENST00000474584 CCNL1Q9UK58 526 aaPredicted RBP15.52■□□□□ 0.07
RPGR-206ENST00000474584 ATP6V0A2Q9Y487 856 aa15.52■□□□□ 0.07
RPGR-206ENST00000474584 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms