RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 POLR3DP05423 398 aaPredicted RBP11.22□□□□□ -0.61
APTX-216ENST00000472896 SARSP49591 514 aaKnown RBP11.22□□□□□ -0.61
APTX-216ENST00000472896 PLCD1P51178 756 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 PDE4BQ07343 736 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 ACTN3Q08043 901 aaPredicted RBP11.22□□□□□ -0.61
APTX-216ENST00000472896 RBL2Q08999 1139 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 MORC3Q14149 939 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 EMC10Q5UCC4 262 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 SHC4Q6S5L8 630 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 CYP26C1Q6V0L0 522 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 ZNF662Q6ZS27 426 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 SH3BP5LQ7L8J4 393 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 CCDC84Q86UT8 332 aaPredicted RBP11.22□□□□□ -0.61
APTX-216ENST00000472896 SCYL3Q8IZE3 742 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 ANKRD13CQ8N6S4 541 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 EHBP1Q8NDI1 1231 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 FAM212AQ96EL1 285 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 LRRC2Q9BYS8 371 aa11.22□□□□□ -0.61
APTX-216ENST00000472896 PA2G4Q9UQ80 394 aaKnown RBP11.22□□□□□ -0.61
APTX-216ENST00000472896 GOLGA6L7A0A1B0GV03 622 aa11.21□□□□□ -0.61
APTX-216ENST00000472896 PATL2C9JE40 543 aaKnown RBP11.21□□□□□ -0.61
APTX-216ENST00000472896 RASSF9O75901 435 aa11.21□□□□□ -0.61
APTX-216ENST00000472896 CDR1P51861 262 aa11.21□□□□□ -0.61
APTX-216ENST00000472896 SLC8A3P57103 927 aa11.21□□□□□ -0.61
APTX-216ENST00000472896 SARNPP82979 210 aaKnown RBP11.21□□□□□ -0.61
APTX-216ENST00000472896 MDM2Q00987 491 aaPredicted RBP11.21□□□□□ -0.61
APTX-216ENST00000472896 IFFO1Q0D2I5 559 aa11.21□□□□□ -0.61
APTX-216ENST00000472896 RABL6Q3YEC7 729 aaPredicted RBP11.21□□□□□ -0.61
APTX-216ENST00000472896 CEP85LQ5SZL2 805 aa11.21□□□□□ -0.61
APTX-216ENST00000472896 PAPD7Q5XG87 772 aaKnown RBP11.21□□□□□ -0.61
APTX-216ENST00000472896 TRIM6Q9C030 488 aaPredicted RBP11.21□□□□□ -0.61
APTX-216ENST00000472896 HAUS4Q9H6D7 363 aa11.21□□□□□ -0.61
APTX-216ENST00000472896 GJD2Q9UKL4 321 aa11.21□□□□□ -0.61
APTX-216ENST00000472896 SLC45A1Q9Y2W3 748 aa11.21□□□□□ -0.61
APTX-216ENST00000472896 LAMA3Q16787 3333 aa11.21□□□□□ -0.61
APTX-216ENST00000472896 KLHL33A6NCF5 533 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 MYO1FO00160 1098 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 EZRP15311 586 aaKnown RBP11.21□□□□□ -0.62
APTX-216ENST00000472896 PRDX5P30044 214 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 SLC8A1P32418 973 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 PTPAQ15257 358 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 CCDC40Q4G0X9 1142 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 SPATA1Q5VX52 437 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 TDHQ8IZJ6 230 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 C3orf20Q8ND61 904 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 WDR66Q8TBY9 1149 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 AENQ8WTP8 325 aaKnown RBP11.21□□□□□ -0.62
APTX-216ENST00000472896 COA7Q96BR5 231 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 NBPF3Q9H094 633 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 NCOA5Q9HCD5 579 aaKnown RBP11.21□□□□□ -0.62
APTX-216ENST00000472896 KCNH3Q9ULD8 1083 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 SAR1BQ9Y6B6 198 aa11.21□□□□□ -0.62
APTX-216ENST00000472896 ZMYM6O95789 1325 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 E7EWF7 191 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 NEBLO76041 1014 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 BMP6P22004 513 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 MAP3K10Q02779 954 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 ICA1Q05084 483 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 ITIH3Q06033 890 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 NNTQ13423 1086 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 POSTNQ15063 836 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 SNCBQ16143 134 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 TREML2Q5T2D2 321 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 FOXP4Q8IVH2 680 aaPredicted RBP11.2□□□□□ -0.62
APTX-216ENST00000472896 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 C1orf131Q8NDD1 294 aaKnown RBP11.2□□□□□ -0.62
APTX-216ENST00000472896 HAUS7Q99871 368 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 UBE2OQ9C0C9 1292 aaKnown RBP11.2□□□□□ -0.62
APTX-216ENST00000472896 ATP6V0A4Q9HBG4 840 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 CD248Q9HCU0 757 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 BATF3Q9NR55 127 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 PICK1Q9NRD5 415 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 WDR19Q8NEZ3 1342 aa11.2□□□□□ -0.62
APTX-216ENST00000472896 DDTLA6NHG4 134 aaPredicted RBP11.19□□□□□ -0.62
APTX-216ENST00000472896 TRIM75PA6NK02 468 aa11.19□□□□□ -0.62
APTX-216ENST00000472896 IFIT1P09914 478 aaKnown RBP11.19□□□□□ -0.62
APTX-216ENST00000472896 NAP1L1P55209 391 aaKnown RBP11.19□□□□□ -0.62
APTX-216ENST00000472896 SKIDA1Q1XH10 827 aa11.19□□□□□ -0.62
APTX-216ENST00000472896 LONRF3Q496Y0 759 aa11.19□□□□□ -0.62
APTX-216ENST00000472896 NCAPH2Q6IBW4 605 aa11.19□□□□□ -0.62
APTX-216ENST00000472896 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.19□□□□□ -0.62
APTX-216ENST00000472896 MMGT1Q8N4V1 131 aa11.19□□□□□ -0.62
APTX-216ENST00000472896 SMCR8Q8TEV9 937 aaPredicted RBP11.19□□□□□ -0.62
APTX-216ENST00000472896 RIN2Q8WYP3 895 aaPredicted RBP11.19□□□□□ -0.62
APTX-216ENST00000472896 SGSM3Q96HU1 749 aa11.19□□□□□ -0.62
APTX-216ENST00000472896 RUFY1Q96T51 708 aa11.19□□□□□ -0.62
APTX-216ENST00000472896 EPN3Q9H201 632 aa11.19□□□□□ -0.62
APTX-216ENST00000472896 C11orf49Q9H6J7 331 aa11.19□□□□□ -0.62
APTX-216ENST00000472896 TLR7Q9NYK1 1049 aaKnown RBP11.19□□□□□ -0.62
APTX-216ENST00000472896 ADD3Q9UEY8 706 aaKnown RBP11.19□□□□□ -0.62
APTX-216ENST00000472896 ANO9A1A5B4 782 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 KIF28PB7ZC32 967 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 HSF2BPO75031 334 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 RTN2O75298 545 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 TNFRSF8P28908 595 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 MARCKSP29966 332 aaPredicted RBP11.18□□□□□ -0.62
APTX-216ENST00000472896 CDC27P30260 824 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 GRIK3Q13003 919 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 PUM3Q15397 648 aaKnown RBP11.18□□□□□ -0.62
APTX-216ENST00000472896 PTPN21Q16825 1174 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms