RNA–Protein interactions for RNA: ENST00000471779.1

DMD-219, Transcript of dystrophin, humanhuman

TSL 1 (best)

Gene DMD, Length 362 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-219ENST00000471779 GH2P01242 217 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 CYP2D6P10635 497 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 GSPT1P15170 499 aaKnown RBP3.3□□□□□ -1.88
DMD-219ENST00000471779 PTPRAP18433 802 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 INPP5BP32019 993 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 TM4SF4P48230 202 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 HAND2P61296 217 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 TRAF1Q13077 416 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 IKQ13123 557 aaPredicted RBP3.3□□□□□ -1.88
DMD-219ENST00000471779 PPIL2Q13356 520 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 MTMR3Q13615 1198 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 COG2Q14746 738 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 SEPT2Q15019 361 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 CCL15Q16663 113 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 NOL9Q5SY16 702 aaKnown RBP3.3□□□□□ -1.88
DMD-219ENST00000471779 NFXL1Q6ZNB6 911 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.3□□□□□ -1.88
DMD-219ENST00000471779 C16orf86Q6ZW13 317 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 RAB44Q7Z6P3 723 aaPredicted RBP3.3□□□□□ -1.88
DMD-219ENST00000471779 DGKHQ86XP1 1220 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 ZDHHC13Q8IUH4 622 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.3□□□□□ -1.88
DMD-219ENST00000471779 C1orf216Q8TAB5 229 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 CHURC1Q8WUH1 139 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 NUDT8Q8WV74 236 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 OPTNQ96CV9 577 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 DYNLL2Q96FJ2 89 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 WDR18Q9BV38 432 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 KAT14Q9H8E8 782 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 ZFYVE28Q9HCC9 887 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 RNF19AQ9NV58 838 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 NYAP2Q9P242 653 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 ANAPC4Q9UJX5 808 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 STX8Q9UNK0 236 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 PCDHB9Q9Y5E1 797 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 PCDHGA11Q9Y5H2 935 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 MYH13Q9UKX3 1938 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 COL4A1P02462 1669 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 COL4A5P29400 1685 aa3.3□□□□□ -1.88
DMD-219ENST00000471779 DUOX1Q9NRD9 1551 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 COL1A1P02452 1464 aaPredicted RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 SCN9AQ15858 1988 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 CNTNAP1P78357 1384 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 AKAP11Q9UKA4 1901 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 CYP2D7A0A087X1C5 515 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 TRIM75PA6NK02 468 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 E7EWF7 191 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 GSC2O15499 205 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 EFSO43281 561 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 ORC4O43929 436 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 DHX16O60231 1041 aaKnown RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 AOC2O75106 756 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 ZBED4O75132 1171 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 PRDM1O75626 825 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 STAU1O95793 577 aaKnown RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 TTLL1O95922 423 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 CHGBP05060 677 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 TOP1P11387 765 aaKnown RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 EEF2P13639 858 aaKnown RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 HOXD10P28358 340 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 MCM5P33992 734 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 BACE1P56817 501 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 IRX3P78415 501 aaPredicted RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 HTRA3P83110 453 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 ARHGAP4P98171 946 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 PTH1RQ03431 593 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 ICA1Q05084 483 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 VGLL4Q14135 290 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 WTAPQ15007 396 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 TAF1CQ15572 869 aaPredicted RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 ZYXQ15942 572 aaKnown RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 FAM47AQ5JRC9 791 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 VPS53Q5VIR6 699 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 CREB3L3Q68CJ9 461 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 SLFN13Q68D06 897 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 RCSD1Q6JBY9 416 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 BLOC1S2Q6QNY1 142 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 CATIPQ7Z7H3 387 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 ANKRD23Q86SG2 305 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 METTL16Q86W50 562 aaKnown RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 GTF3C2Q8WUA4 911 aaPredicted RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 STAG1Q8WVM7 1258 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 MKL1Q969V6 931 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 WNK4Q96J92 1243 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 CLMNQ96JQ2 1002 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 NEK1Q96PY6 1258 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 SLC30A3Q99726 388 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 MTA3Q9BTC8 594 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 USP26Q9BXU7 913 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 TCP11L1Q9NUJ3 509 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 SLC5A4Q9NY91 659 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 CXXC1Q9P0U4 656 aaPredicted RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 PNMA2Q9UL42 364 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 ZBTB21Q9ULJ3 1066 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 NAP1L2Q9ULW6 460 aaPredicted RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 FZD1Q9UP38 647 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 AFG3L2Q9Y4W6 797 aa3.29□□□□□ -1.88
DMD-219ENST00000471779 RBM8AQ9Y5S9 174 aaKnown RBP3.29□□□□□ -1.88
DMD-219ENST00000471779 ATRNL1Q5VV63 1379 aa3.28□□□□□ -1.88
DMD-219ENST00000471779 LTBP1Q14766 1721 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms