RNA–Protein interactions for RNA: ENST00000471779.1

DMD-219, Transcript of dystrophin, humanhuman

TSL 1 (best)

Gene DMD, Length 362 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-219ENST00000471779 AEBP2Q6ZN18 517 aaPredicted RBP13.45□□□□□ -0.26
DMD-219ENST00000471779 CHIC1Q5VXU3 224 aa12.51□□□□□ -0.41
DMD-219ENST00000471779 SENP3Q9H4L4 574 aaPredicted RBP11.53□□□□□ -0.56
DMD-219ENST00000471779 PHF23Q9BUL5 403 aaPredicted RBP11.31□□□□□ -0.6
DMD-219ENST00000471779 POTEDQ86YR6 584 aa11.22□□□□□ -0.61
DMD-219ENST00000471779 FOXD1Q16676 465 aa10.85□□□□□ -0.67
DMD-219ENST00000471779 MSH5O43196 834 aa10.36□□□□□ -0.75
DMD-219ENST00000471779 PIAS4Q8N2W9 510 aaPredicted RBP10.01□□□□□ -0.81
DMD-219ENST00000471779 PPP6R1Q9UPN7 881 aa9.68□□□□□ -0.86
DMD-219ENST00000471779 ADRA2BP18089 450 aa9.62□□□□□ -0.87
DMD-219ENST00000471779 PLPPR3Q6T4P5 718 aa9.4□□□□□ -0.9
DMD-219ENST00000471779 CACNB1Q02641 598 aaPredicted RBP9.32□□□□□ -0.92
DMD-219ENST00000471779 MAPK8IP2Q13387 824 aaPredicted RBP9.04□□□□□ -0.96
DMD-219ENST00000471779 DMRT2Q9Y5R5 561 aa9.04□□□□□ -0.96
DMD-219ENST00000471779 DCAF8L1A6NGE4 600 aa8.8□□□□□ -1
DMD-219ENST00000471779 RNF39Q9H2S5 420 aa8.79□□□□□ -1
DMD-219ENST00000471779 SCAF1Q9H7N4 1312 aaKnown RBP8.73□□□□□ -1.01
DMD-219ENST00000471779 POTEHQ6S545 545 aa8.67□□□□□ -1.02
DMD-219ENST00000471779 C1QBPQ07021 282 aaKnown RBP8.6□□□□□ -1.03
DMD-219ENST00000471779 HOXD11P31277 338 aaPredicted RBP8.44□□□□□ -1.06
DMD-219ENST00000471779 RNF216Q9NWF9 866 aaPredicted RBP8.22□□□□□ -1.09
DMD-219ENST00000471779 DNAJC5BQ9UF47 199 aa8.2□□□□□ -1.1
DMD-219ENST00000471779 PPP4R3CPQ6ZMV5 832 aa8.17□□□□□ -1.1
DMD-219ENST00000471779 CNKSR2Q8WXI2 1034 aa8.14□□□□□ -1.11
DMD-219ENST00000471779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.1□□□□□ -1.11
DMD-219ENST00000471779 DSG3P32926 999 aa8.03□□□□□ -1.12
DMD-219ENST00000471779 CAPN15O75808 1086 aa7.97□□□□□ -1.13
DMD-219ENST00000471779 SPINK5Q9NQ38 1064 aaPredicted RBP7.95□□□□□ -1.14
DMD-219ENST00000471779 U3KPZ7 1027 aaPredicted RBP7.85□□□□□ -1.15
DMD-219ENST00000471779 SP7Q8TDD2 431 aaPredicted RBP7.83□□□□□ -1.16
DMD-219ENST00000471779 CHRDL2Q6WN34 429 aa7.77□□□□□ -1.17
DMD-219ENST00000471779 ABCB7O75027 752 aa7.76□□□□□ -1.17
DMD-219ENST00000471779 TRHP20396 242 aaPredicted RBP7.71□□□□□ -1.18
DMD-219ENST00000471779 RBM42Q9BTD8 480 aaKnown RBP7.65□□□□□ -1.18
DMD-219ENST00000471779 NCBP3Q53F19 620 aaKnown RBP7.64□□□□□ -1.19
DMD-219ENST00000471779 ZNF219Q9P2Y4 722 aaPredicted RBP7.6□□□□□ -1.19
DMD-219ENST00000471779 NPM3O75607 178 aaKnown RBP7.57□□□□□ -1.2
DMD-219ENST00000471779 HAX1O00165 279 aa7.51□□□□□ -1.21
DMD-219ENST00000471779 APLP2Q06481 763 aa7.5□□□□□ -1.21
DMD-219ENST00000471779 PLSCR2Q9NRY7 297 aa7.47□□□□□ -1.21
DMD-219ENST00000471779 PIP4P2Q8N4L2 257 aa7.46□□□□□ -1.22
DMD-219ENST00000471779 SLC4A2P04920 1241 aa7.38□□□□□ -1.23
DMD-219ENST00000471779 EVX2Q03828 476 aa7.38□□□□□ -1.23
DMD-219ENST00000471779 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.36□□□□□ -1.23
DMD-219ENST00000471779 HNRNPUL2Q1KMD3 747 aaKnown RBP7.36□□□□□ -1.23
DMD-219ENST00000471779 AKT1S1Q96B36 256 aa7.35□□□□□ -1.23
DMD-219ENST00000471779 LHX8Q68G74 356 aa7.34□□□□□ -1.23
DMD-219ENST00000471779 POLA2Q14181 598 aa7.32□□□□□ -1.24
DMD-219ENST00000471779 REM2Q8IYK8 340 aaPredicted RBP7.31□□□□□ -1.24
DMD-219ENST00000471779 SAMD1Q6SPF0 538 aaPredicted RBP7.3□□□□□ -1.24
DMD-219ENST00000471779 FXR2P51116 673 aaKnown RBP eCLIP7.28□□□□□ -1.24
DMD-219ENST00000471779 PITPNM1O00562 1244 aa7.26□□□□□ -1.25
DMD-219ENST00000471779 GABBR2O75899 941 aa7.15□□□□□ -1.26
DMD-219ENST00000471779 OSCARQ8IYS5 282 aa7.15□□□□□ -1.26
DMD-219ENST00000471779 C19orf67A6NJJ6 358 aa7.08□□□□□ -1.28
DMD-219ENST00000471779 PRKAR2AP13861 404 aaKnown RBP7.07□□□□□ -1.28
DMD-219ENST00000471779 ZBTB12Q9Y330 459 aaPredicted RBP7.07□□□□□ -1.28
DMD-219ENST00000471779 POTEIP0CG38 1075 aa7□□□□□ -1.29
DMD-219ENST00000471779 MYCNP04198 464 aaPredicted RBP6.99□□□□□ -1.29
DMD-219ENST00000471779 POTEMA6NI47 508 aa6.96□□□□□ -1.3
DMD-219ENST00000471779 CLEC11AQ9Y240 323 aa6.95□□□□□ -1.3
DMD-219ENST00000471779 ATF5Q9Y2D1 282 aaPredicted RBP6.94□□□□□ -1.3
DMD-219ENST00000471779 POTEGQ6S5H5 508 aa6.92□□□□□ -1.3
DMD-219ENST00000471779 KCNA4P22459 653 aa6.89□□□□□ -1.31
DMD-219ENST00000471779 CHADLQ6NUI6 762 aa6.89□□□□□ -1.31
DMD-219ENST00000471779 SPDYE1Q8NFV5 336 aaPredicted RBP6.86□□□□□ -1.31
DMD-219ENST00000471779 OTUD5Q96G74 571 aa6.86□□□□□ -1.31
DMD-219ENST00000471779 DCBLD2Q96PD2 775 aa6.84□□□□□ -1.31
DMD-219ENST00000471779 SPDYE2BA6NHP3 402 aa6.81□□□□□ -1.32
DMD-219ENST00000471779 SPDYE6P0CI01 402 aa6.81□□□□□ -1.32
DMD-219ENST00000471779 SPDYE2Q495Y8 402 aa6.81□□□□□ -1.32
DMD-219ENST00000471779 CD44P16070 742 aaKnown RBP6.8□□□□□ -1.32
DMD-219ENST00000471779 PCDH10Q9P2E7 1040 aa6.79□□□□□ -1.32
DMD-219ENST00000471779 POTEB2H3BUK9 544 aa6.77□□□□□ -1.33
DMD-219ENST00000471779 CLCN6P51797 869 aa6.72□□□□□ -1.33
DMD-219ENST00000471779 PRR29P0C7W0 189 aa6.7□□□□□ -1.34
DMD-219ENST00000471779 FBLN2P98095 1184 aa6.67□□□□□ -1.34
DMD-219ENST00000471779 ZNF692Q9BU19 519 aaPredicted RBP6.67□□□□□ -1.34
DMD-219ENST00000471779 FARP1Q9Y4F1 1045 aaPredicted RBP6.66□□□□□ -1.34
DMD-219ENST00000471779 GALR2O43603 387 aaPredicted RBP6.65□□□□□ -1.34
DMD-219ENST00000471779 SSUH2Q9Y2M2 353 aa6.65□□□□□ -1.34
DMD-219ENST00000471779 LCE2DQ5TA82 110 aaPredicted RBP6.64□□□□□ -1.35
DMD-219ENST00000471779 ZNF579Q8NAF0 562 aaKnown RBP6.63□□□□□ -1.35
DMD-219ENST00000471779 FAM163AQ96GL9 167 aaPredicted RBP6.63□□□□□ -1.35
DMD-219ENST00000471779 ZRANB1Q9UGI0 708 aa6.62□□□□□ -1.35
DMD-219ENST00000471779 FOXD4L1Q9NU39 408 aa6.59□□□□□ -1.35
DMD-219ENST00000471779 PELP1Q8IZL8 1130 aaKnown RBP6.57□□□□□ -1.36
DMD-219ENST00000471779 POTEJP0CG39 1038 aa6.56□□□□□ -1.36
DMD-219ENST00000471779 MKRN4PQ13434 485 aaPredicted RBP6.56□□□□□ -1.36
DMD-219ENST00000471779 PABPN1Q86U42 306 aaKnown RBP eCLIP6.56□□□□□ -1.36
DMD-219ENST00000471779 CDAN1Q8IWY9 1227 aa6.53□□□□□ -1.36
DMD-219ENST00000471779 METRNQ9UJH8 293 aa6.53□□□□□ -1.36
DMD-219ENST00000471779 MAMSTRQ6ZN01 415 aa6.5□□□□□ -1.37
DMD-219ENST00000471779 PHF12Q96QT6 1004 aa6.49□□□□□ -1.37
DMD-219ENST00000471779 SCUBE2Q9NQ36 999 aa6.46□□□□□ -1.38
DMD-219ENST00000471779 SLC39A7Q92504 469 aa6.45□□□□□ -1.38
DMD-219ENST00000471779 C7P10643 843 aa6.44□□□□□ -1.38
DMD-219ENST00000471779 MMRN1Q13201 1228 aa6.44□□□□□ -1.38
DMD-219ENST00000471779 ATMINO43313 823 aaPredicted RBP6.41□□□□□ -1.38
DMD-219ENST00000471779 PAK3O75914 559 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms