RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 MRVI1Q9Y6F6 885 aa10.6□□□□□ -0.71
BRCA1-207ENST00000461798 FRMPD4Q14CM0 1322 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 SCN10AQ9Y5Y9 1956 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 HAS3O00219 553 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 PIK3CDO00329 1044 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 STAM2O75886 525 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 CALM1P0DP23 149 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 CALM2P0DP24 149 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 CALM3P0DP25 149 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 MYCLP12524 364 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-207ENST00000461798 DNAJB2P25686 324 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 ICAM3P32942 547 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 RFC2P35250 354 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 COL9A3Q14050 684 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-207ENST00000461798 DGKDQ16760 1214 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 FAM47CQ5HY64 1035 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 CELF3Q5SZQ8 465 aaKnown RBP10.59□□□□□ -0.71
BRCA1-207ENST00000461798 SGMS1Q86VZ5 419 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 DHX37Q8IY37 1157 aaKnown RBP10.59□□□□□ -0.71
BRCA1-207ENST00000461798 IL31RAQ8NI17 732 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 PPTC7Q8NI37 304 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 TIFAQ96CG3 184 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 RRP36Q96EU6 259 aaKnown RBP10.59□□□□□ -0.71
BRCA1-207ENST00000461798 CTAGE1Q96RT6 745 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 PBX4Q9BYU1 374 aa10.59□□□□□ -0.71
BRCA1-207ENST00000461798 CXXC1Q9P0U4 656 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-207ENST00000461798 CCDC69A6NI79 296 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 GRXCR1A8MXD5 290 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 F2P00734 622 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 IQCF3P0C7M6 154 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 CCND2P30279 289 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 SP2Q02086 613 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 RBL2Q08999 1139 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 RNF20Q5VTR2 975 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 XRRA1Q6P2D8 792 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 OTOP2Q7RTS6 562 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 FCHSD1Q86WN1 690 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 SRBD1Q8N5C6 995 aaKnown RBP10.58□□□□□ -0.72
BRCA1-207ENST00000461798 RETREG2Q8NC44 543 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 RNF166Q96A37 237 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-207ENST00000461798 SCLYQ96I15 445 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 INPP4AQ96PE3 977 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-207ENST00000461798 ZNF576Q9H609 170 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 ANO2Q9NQ90 1003 aa10.58□□□□□ -0.72
BRCA1-207ENST00000461798 SPATA31C2B4DYI2 1134 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 MEIS2O14770 477 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 UBA1P22314 1058 aaKnown RBP10.57□□□□□ -0.72
BRCA1-207ENST00000461798 PBX2P40425 430 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 PSEN2P49810 448 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 MRPS9P82933 396 aaKnown RBP10.57□□□□□ -0.72
BRCA1-207ENST00000461798 EXOSC10Q01780 885 aaKnown RBP10.57□□□□□ -0.72
BRCA1-207ENST00000461798 BFSP2Q13515 415 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 GRIN2CQ14957 1233 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 RAB30Q15771 203 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 PTGISQ16647 500 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 HSDL1Q3SXM5 330 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 GDF6Q6KF10 455 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-207ENST00000461798 NFXL1Q6ZNB6 911 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 TEX2Q8IWB9 1127 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 FANCBQ8NB91 859 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 CAGE1Q8TC20 777 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 AFAP1L1Q8TED9 768 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 MYLIPQ8WY64 445 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 NEK1Q96PY6 1258 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 MYL10Q9BUA6 226 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 KATNAL1Q9BW62 490 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 GTF2IRD1Q9UHL9 959 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 SLC12A7Q9Y666 1083 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 SLC4A7Q9Y6M7 1214 aa10.57□□□□□ -0.72
BRCA1-207ENST00000461798 CDC45O75419 566 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 PLEKHA8P1O95397 391 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 PARNO95453 639 aaKnown RBP10.56□□□□□ -0.72
BRCA1-207ENST00000461798 GGPS1O95749 300 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 GPNMBQ14956 572 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 GNPTABQ3T906 1256 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 PCNX4Q63HM2 1172 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 TMTC3Q6ZXV5 915 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 DHX32Q7L7V1 743 aaKnown RBP10.56□□□□□ -0.72
BRCA1-207ENST00000461798 SKAP1Q86WV1 359 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 CCDC155Q8N6L0 562 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 C7orf31Q8N865 590 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 PHOSPHO2Q8TCD6 241 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 PPP1R13LQ8WUF5 828 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 KCNB2Q92953 911 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 SPATA33Q96N06 139 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 SENP7Q9BQF6 1050 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 C16orf70Q9BSU1 422 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 HDAC6Q9UBN7 1215 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 SEC63Q9UGP8 760 aaKnown RBP10.56□□□□□ -0.72
BRCA1-207ENST00000461798 MSRAQ9UJ68 235 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 NOD1Q9Y239 953 aa10.56□□□□□ -0.72
BRCA1-207ENST00000461798 BAZ2BQ9UIF8 2168 aaKnown RBP10.56□□□□□ -0.72
BRCA1-207ENST00000461798 COL6A3P12111 3177 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 FIBPO43427 364 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 ACTN1P12814 892 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 SELPP16109 830 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 HOXC8P31273 242 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 SEMA3FQ13275 785 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 PTK7Q13308 1070 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 NEDD9Q14511 834 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms