RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 MTIF3Q9H2K0 278 aaKnown RBP11.16□□□□□ -0.62
CD40-203ENST00000461171 ZNF576Q9H609 170 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 GTF2IRD1Q9UHL9 959 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 GBF1Q92538 1859 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 CCDC69A6NI79 296 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 C19orf67A6NJJ6 358 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 CDC45O75419 566 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 STAM2O75886 525 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 GGPS1O95749 300 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 IQCF3P0C7M6 154 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 ZNF286BP0CG31 522 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 CALM1P0DP23 149 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 CALM2P0DP24 149 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 CALM3P0DP25 149 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 ICAM3P32942 547 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 RFC2P35250 354 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 PSEN2P49810 448 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 SEMA3FQ13275 785 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 BFSP2Q13515 415 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 RAB30Q15771 203 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 PTGISQ16647 500 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 HSDL1Q3SXM5 330 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 TSGA10IPQ3SY00 556 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 GDF6Q6KF10 455 aaPredicted RBP11.15□□□□□ -0.62
CD40-203ENST00000461171 USP17L6PQ6QN14 398 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 NFXL1Q6ZNB6 911 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 DHX37Q8IY37 1157 aaKnown RBP11.15□□□□□ -0.62
CD40-203ENST00000461171 RASEFQ8IZ41 740 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 MAFAQ8NHW3 353 aaPredicted RBP11.15□□□□□ -0.62
CD40-203ENST00000461171 CAGE1Q8TC20 777 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 PIBF1Q8WXW3 757 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 DHX38Q92620 1227 aaKnown RBP11.15□□□□□ -0.62
CD40-203ENST00000461171 ZFP91Q96JP5 570 aaPredicted RBP11.15□□□□□ -0.62
CD40-203ENST00000461171 LRRC2Q9BYS8 371 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 SEC63Q9UGP8 760 aaKnown RBP11.15□□□□□ -0.62
CD40-203ENST00000461171 YBX2Q9Y2T7 364 aaKnown RBP11.15□□□□□ -0.62
CD40-203ENST00000461171 SLC12A7Q9Y666 1083 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 MYH7BA7E2Y1 1941 aa11.15□□□□□ -0.62
CD40-203ENST00000461171 TRANK1O15050 2925 aa11.15□□□□□ -0.63
CD40-203ENST00000461171 SPATA31C2B4DYI2 1134 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 PPFIA4O75335 1185 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 FOSL2P15408 326 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 HOXC8P31273 242 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 EXOSC10Q01780 885 aaKnown RBP11.14□□□□□ -0.63
CD40-203ENST00000461171 MFSD10Q14728 455 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 GPNMBQ14956 572 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 GNPTABQ3T906 1256 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 RNF20Q5VTR2 975 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 PCNX4Q63HM2 1172 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 APOA5Q6Q788 366 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 RAB11FIP4Q86YS3 637 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 CMTR1Q8N1G2 835 aaKnown RBP11.14□□□□□ -0.63
CD40-203ENST00000461171 FANCBQ8NB91 859 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 AFAP1L1Q8TED9 768 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 SPATA33Q96N06 139 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 NEK1Q96PY6 1258 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 C16orf70Q9BSU1 422 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 KATNAL1Q9BW62 490 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 HDAC6Q9UBN7 1215 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 NOD1Q9Y239 953 aa11.14□□□□□ -0.63
CD40-203ENST00000461171 TRIP12Q14669 1992 aaPredicted RBP11.14□□□□□ -0.63
CD40-203ENST00000461171 CNTNAP5Q8WYK1 1306 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 NCOR1O75376 2440 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 FIBPO43427 364 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 CHMP4BP1P59074 171 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 FUT2Q10981 343 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 HIC1Q14526 733 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 KIAA0753Q2KHM9 967 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 TRIM71Q2Q1W2 868 aaKnown RBP11.13□□□□□ -0.63
CD40-203ENST00000461171 ADCK5Q3MIX3 580 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 XRRA1Q6P2D8 792 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 TRAF7Q6Q0C0 670 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 METTL7BQ6UX53 244 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 DEFB128Q7Z7B8 93 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 MICU3Q86XE3 530 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.13□□□□□ -0.63
CD40-203ENST00000461171 C7orf31Q8N865 590 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 WNT8BQ93098 351 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 BCAS3Q9H6U6 928 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 MSRAQ9UJ68 235 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 SLC4A7Q9Y6M7 1214 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 VCANP13611 3396 aa11.13□□□□□ -0.63
CD40-203ENST00000461171 SORBS3O60504 671 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 LGALS2P05162 132 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 SELPP16109 830 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 ATP2A2P16615 1042 aaKnown RBP11.12□□□□□ -0.63
CD40-203ENST00000461171 PTK7Q13308 1070 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 LRRC8DQ7L1W4 858 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 DHX32Q7L7V1 743 aaKnown RBP11.12□□□□□ -0.63
CD40-203ENST00000461171 CCDC155Q8N6L0 562 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 RETREG2Q8NC44 543 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 SMARCC2Q8TAQ2 1214 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 KCNB2Q92953 911 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 CUL5Q93034 780 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 TCEANC2Q96MN5 208 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 SENP7Q9BQF6 1050 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 ALG1Q9BT22 464 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 NKX2-4Q9H2Z4 354 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 BRPF3Q9ULD4 1205 aa11.12□□□□□ -0.63
CD40-203ENST00000461171 PCDHA11Q9Y5I1 949 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms