RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 MRVI1Q9Y6F6 885 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 SPTBN5Q9NRC6 3674 aaKnown RBP9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 KDM4AO75164 1064 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 PPFIA4O75335 1185 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 ARIH2O95376 493 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 CXCL10P02778 98 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 WDR5P61964 334 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 PTK7Q13308 1070 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 IKBKEQ14164 716 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 MFSD10Q14728 455 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 IMMTQ16891 758 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 LY6KQ17RY6 165 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 GDF6Q6KF10 455 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 DHX37Q8IY37 1157 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 FAM122AQ96E09 287 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 TAAR1Q96RJ0 339 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 CRBNQ96SW2 442 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 RAD9AQ99638 391 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 UBA5Q9GZZ9 404 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 RWDD1Q9H446 243 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 METRNQ9UJH8 293 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 DDX41Q9UJV9 622 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 ARIH1Q9Y4X5 557 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 CHD9Q3L8U1 2897 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 BDP1A6H8Y1 2624 aa9.34□□□□□ -0.91
NIF3L1-209ENST00000454952 NEDD4P46934 1319 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 SIP14410 1827 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 PTPRSQ13332 1948 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 COL4A4P53420 1690 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 GJB5O95377 273 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 F2P00734 622 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 NR3C2P08235 984 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 TGFB3P10600 412 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 CKBP12277 381 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 PLA2G5P39877 138 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 PSEN2P49810 448 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 HSD17B4P51659 736 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 KCNQ1P51787 676 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 GHRHRQ02643 423 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 TFF2Q03403 129 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 GRB10Q13322 594 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 QRICH1Q2TAL8 776 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 CHST3Q7LGC8 479 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 ENAHQ8N8S7 591 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 KAT2BQ92831 832 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 TGS1Q96RS0 853 aaKnown RBP9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 ZKSCAN3Q9BRR0 538 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 DSCC1Q9BVC3 393 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 LNPKQ9C0E8 428 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 OSBPL3Q9H4L5 887 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 CERS4Q9HA82 394 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 PXMP2Q9NR77 195 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 HDAC6Q9UBN7 1215 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 HCN4Q9Y3Q4 1203 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 BRWD1Q9NSI6 2320 aa9.33□□□□□ -0.92
NIF3L1-209ENST00000454952 CHD7Q9P2D1 2997 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 B4E1Z4 1266 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 HAS3O00219 553 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 RFXAPO00287 272 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 CFBP00751 764 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 AMHP03971 560 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 HOXD8P13378 290 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 EIF2AK2P19525 551 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 ERVK-21P61565 698 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 TRDNQ13061 729 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 KIAA0753Q2KHM9 967 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 IFIT1BQ5T764 474 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 CWC27Q6UX04 472 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 SMC5Q8IY18 1101 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 SAMD11Q96NU1 681 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 CTAGE1Q96RT6 745 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 ALG1Q9BT22 464 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 JMJD4Q9H9V9 463 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 ZSWIM5Q9P217 1185 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 COL20A1Q9P218 1284 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 INSL6Q9Y581 213 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 MICAL3Q7RTP6 2002 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 KAT6AQ92794 2004 aa9.32□□□□□ -0.92
NIF3L1-209ENST00000454952 EPOPA6NHQ4 379 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 ZBTB5O15062 677 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 NBNO60934 754 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 CAND2O75155 1236 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 LGR5O75473 907 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 STAM2O75886 525 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 ZNF286BP0CG31 522 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 GNAT1P11488 350 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 CCND2P30279 289 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 PTPROQ16827 1216 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 PUS10Q3MIT2 529 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 GNPTABQ3T906 1256 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 CELF3Q5SZQ8 465 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 MAMSTRQ6ZN01 415 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 STOX1Q6ZVD7 989 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 CHD1LQ86WJ1 897 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 PPP1R13LQ8WUF5 828 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 TBC1D5Q92609 795 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 DHX38Q92620 1227 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 SPATA33Q96N06 139 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 NECAB3Q96P71 396 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 PDCD2LQ9BRP1 358 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms