RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 AFAP1L1Q8TED9 768 aa31.39■■■□□ 2.62
USP42-204ENST00000451154 MYL10Q9BUA6 226 aa31.39■■■□□ 2.62
USP42-204ENST00000451154 KATNAL1Q9BW62 490 aa31.39■■■□□ 2.62
USP42-204ENST00000451154 LY9Q9HBG7 655 aa31.39■■■□□ 2.62
USP42-204ENST00000451154 TANC1Q9C0D5 1861 aa31.39■■■□□ 2.62
USP42-204ENST00000451154 TRANK1O15050 2925 aa31.38■■■□□ 2.61
USP42-204ENST00000451154 HAS3O00219 553 aa31.38■■■□□ 2.61
USP42-204ENST00000451154 F2P00734 622 aa31.38■■■□□ 2.61
USP42-204ENST00000451154 SELPP16109 830 aa31.38■■■□□ 2.61
USP42-204ENST00000451154 ZNF200P98182 395 aaPredicted RBP31.38■■■□□ 2.61
USP42-204ENST00000451154 BCAS3Q9H6U6 928 aa31.38■■■□□ 2.61
USP42-204ENST00000451154 REV3LO60673 3130 aa31.38■■■□□ 2.61
USP42-204ENST00000451154 RBAK-RBAKDNI3L0D1 243 aa31.37■■■□□ 2.61
USP42-204ENST00000451154 CA3P07451 260 aa31.37■■■□□ 2.61
USP42-204ENST00000451154 TGFB3P10600 412 aa31.37■■■□□ 2.61
USP42-204ENST00000451154 HOXD8P13378 290 aaPredicted RBP31.37■■■□□ 2.61
USP42-204ENST00000451154 UBA1P22314 1058 aaKnown RBP31.37■■■□□ 2.61
USP42-204ENST00000451154 LRRC8DQ7L1W4 858 aa31.37■■■□□ 2.61
USP42-204ENST00000451154 ZNF654Q8IZM8 581 aa31.37■■■□□ 2.61
USP42-204ENST00000451154 PHOSPHO2Q8TCD6 241 aa31.37■■■□□ 2.61
USP42-204ENST00000451154 SLC9A7Q96T83 725 aa31.37■■■□□ 2.61
USP42-204ENST00000451154 CKBP12277 381 aa31.36■■■□□ 2.61
USP42-204ENST00000451154 MLXIPQ9HAP2 919 aa31.36■■■□□ 2.61
USP42-204ENST00000451154 PRC1O43663 620 aa31.35■■■□□ 2.61
USP42-204ENST00000451154 MRPS9P82933 396 aaKnown RBP31.35■■■□□ 2.61
USP42-204ENST00000451154 COL9A3Q14050 684 aaPredicted RBP31.35■■■□□ 2.61
USP42-204ENST00000451154 CASC1Q6TDU7 716 aa31.35■■■□□ 2.61
USP42-204ENST00000451154 HERC6Q8IVU3 1022 aa31.35■■■□□ 2.61
USP42-204ENST00000451154 CTCFLQ8NI51 663 aaPredicted RBP31.35■■■□□ 2.61
USP42-204ENST00000451154 MAP3K14Q99558 947 aa31.35■■■□□ 2.61
USP42-204ENST00000451154 LSG1Q9H089 658 aaKnown RBP31.35■■■□□ 2.61
USP42-204ENST00000451154 CERS4Q9HA82 394 aa31.35■■■□□ 2.61
USP42-204ENST00000451154 RFXAPO00287 272 aa31.34■■■□□ 2.61
USP42-204ENST00000451154 PTK7Q13308 1070 aa31.34■■■□□ 2.61
USP42-204ENST00000451154 HIC1Q14526 733 aa31.34■■■□□ 2.61
USP42-204ENST00000451154 SYMPKQ92797 1274 aaKnown RBP31.34■■■□□ 2.61
USP42-204ENST00000451154 WNT8BQ93098 351 aa31.34■■■□□ 2.61
USP42-204ENST00000451154 RTEL1Q9NZ71 1219 aa31.34■■■□□ 2.61
USP42-204ENST00000451154 NBNO60934 754 aa31.33■■■□□ 2.61
USP42-204ENST00000451154 BAIAP3O94812 1187 aa31.33■■■□□ 2.61
USP42-204ENST00000451154 RBL2Q08999 1139 aa31.33■■■□□ 2.61
USP42-204ENST00000451154 TJAP1Q5JTD0 557 aa31.33■■■□□ 2.61
USP42-204ENST00000451154 NFXL1Q6ZNB6 911 aa31.33■■■□□ 2.61
USP42-204ENST00000451154 RRP36Q96EU6 259 aaKnown RBP31.33■■■□□ 2.61
USP42-204ENST00000451154 C16orf70Q9BSU1 422 aa31.33■■■□□ 2.61
USP42-204ENST00000451154 SPZ1Q9BXG8 430 aa31.33■■■□□ 2.61
USP42-204ENST00000451154 DDAH1O94760 285 aa31.32■■■□□ 2.6
USP42-204ENST00000451154 KIF5BP33176 963 aa31.32■■■□□ 2.6
USP42-204ENST00000451154 MCM5P33992 734 aa31.32■■■□□ 2.6
USP42-204ENST00000451154 TRIM71Q2Q1W2 868 aaKnown RBP31.32■■■□□ 2.6
USP42-204ENST00000451154 USP17L6PQ6QN14 398 aa31.32■■■□□ 2.6
USP42-204ENST00000451154 KIF28PB7ZC32 967 aa31.31■■■□□ 2.6
USP42-204ENST00000451154 SLC27A2O14975 620 aa31.31■■■□□ 2.6
USP42-204ENST00000451154 ARHGEF15O94989 841 aa31.31■■■□□ 2.6
USP42-204ENST00000451154 KCNJ6P48051 423 aa31.31■■■□□ 2.6
USP42-204ENST00000451154 TCTN1Q2MV58 587 aa31.31■■■□□ 2.6
USP42-204ENST00000451154 ZNF618Q5T7W0 954 aa31.31■■■□□ 2.6
USP42-204ENST00000451154 TMCO2Q7Z6W1 182 aaPredicted RBP31.31■■■□□ 2.6
USP42-204ENST00000451154 CMTR1Q8N1G2 835 aaKnown RBP31.31■■■□□ 2.6
USP42-204ENST00000451154 MICALL1Q8N3F8 863 aa31.31■■■□□ 2.6
USP42-204ENST00000451154 SRBD1Q8N5C6 995 aaKnown RBP31.31■■■□□ 2.6
USP42-204ENST00000451154 ESYT1Q9BSJ8 1104 aa31.31■■■□□ 2.6
USP42-204ENST00000451154 PRRC2BQ5JSZ5 2229 aaKnown RBP31.3■■■□□ 2.6
USP42-204ENST00000451154 FRMPD4Q14CM0 1322 aa31.3■■■□□ 2.6
USP42-204ENST00000451154 SH2B2O14492 632 aaPredicted RBP31.3■■■□□ 2.6
USP42-204ENST00000451154 PLEKHA8P1O95397 391 aa31.3■■■□□ 2.6
USP42-204ENST00000451154 PARNO95453 639 aaKnown RBP31.3■■■□□ 2.6
USP42-204ENST00000451154 CXCL10P02778 98 aa31.3■■■□□ 2.6
USP42-204ENST00000451154 SMARCA1P28370 1054 aa31.3■■■□□ 2.6
USP42-204ENST00000451154 WDR5P61964 334 aaKnown RBP31.3■■■□□ 2.6
USP42-204ENST00000451154 GNPTABQ3T906 1256 aa31.3■■■□□ 2.6
USP42-204ENST00000451154 TRAF7Q6Q0C0 670 aa31.3■■■□□ 2.6
USP42-204ENST00000451154 TMTC2Q8N394 836 aa31.3■■■□□ 2.6
USP42-204ENST00000451154 SMARCC2Q8TAQ2 1214 aa31.3■■■□□ 2.6
USP42-204ENST00000451154 MTA3Q9BTC8 594 aa31.3■■■□□ 2.6
USP42-204ENST00000451154 EPOPA6NHQ4 379 aa31.29■■■□□ 2.6
USP42-204ENST00000451154 CCDC69A6NI79 296 aa31.29■■■□□ 2.6
USP42-204ENST00000451154 SPATA31C2B4DYI2 1134 aa31.29■■■□□ 2.6
USP42-204ENST00000451154 RXRAP19793 462 aa31.29■■■□□ 2.6
USP42-204ENST00000451154 ICAM3P32942 547 aa31.29■■■□□ 2.6
USP42-204ENST00000451154 TAP1Q03518 808 aa31.29■■■□□ 2.6
USP42-204ENST00000451154 SEMA3FQ13275 785 aa31.29■■■□□ 2.6
USP42-204ENST00000451154 CNKSR3Q6P9H4 555 aa31.29■■■□□ 2.6
USP42-204ENST00000451154 INPP4AQ96PE3 977 aaPredicted RBP31.29■■■□□ 2.6
USP42-204ENST00000451154 LZTS2Q9BRK4 669 aa31.29■■■□□ 2.6
USP42-204ENST00000451154 SEC63Q9UGP8 760 aaKnown RBP31.29■■■□□ 2.6
USP42-204ENST00000451154 PTPRSQ13332 1948 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 H3BRB1 525 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 MEIS2O14770 477 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 TLL1O43897 1013 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 STAM2O75886 525 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 CREB3L3Q68CJ9 461 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 CYFIP1Q7L576 1253 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 RAB11FIP4Q86YS3 637 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 ATXN2LQ8WWM7 1075 aaKnown RBP31.28■■■□□ 2.6
USP42-204ENST00000451154 ARNTL2Q8WYA1 636 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 CUL5Q93034 780 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 TMEM87BQ96K49 555 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 LRRC2Q9BYS8 371 aa31.28■■■□□ 2.6
USP42-204ENST00000451154 TUT1Q9H6E5 874 aaKnown RBP31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms