RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SF3A1Q15459 793 aaKnown RBP20.4■□□□□ 0.86
TRAPPC4-203ENST00000447216 Q4G0T1 1027 aa20.4■□□□□ 0.86
TRAPPC4-203ENST00000447216 ANO1Q5XXA6 986 aa20.4■□□□□ 0.86
TRAPPC4-203ENST00000447216 TAPT1Q6NXT6 567 aa20.4■□□□□ 0.86
TRAPPC4-203ENST00000447216 NIPA1Q7RTP0 329 aa20.4■□□□□ 0.86
TRAPPC4-203ENST00000447216 TRPV1Q8NER1 839 aa20.4■□□□□ 0.86
TRAPPC4-203ENST00000447216 GPRASP2Q96D09 838 aa20.4■□□□□ 0.86
TRAPPC4-203ENST00000447216 ABHD16BQ9H3Z7 469 aa20.4■□□□□ 0.86
TRAPPC4-203ENST00000447216 CNPY2Q9Y2B0 182 aa20.4■□□□□ 0.86
TRAPPC4-203ENST00000447216 HTTP42858 3142 aa20.39■□□□□ 0.85
TRAPPC4-203ENST00000447216 HMGCRP04035 888 aa20.39■□□□□ 0.85
TRAPPC4-203ENST00000447216 NCLP19338 710 aaKnown RBP20.39■□□□□ 0.85
TRAPPC4-203ENST00000447216 GRK4P32298 578 aa20.39■□□□□ 0.85
TRAPPC4-203ENST00000447216 CACNB2Q08289 660 aaPredicted RBP20.39■□□□□ 0.85
TRAPPC4-203ENST00000447216 MTMR1Q13613 665 aa20.39■□□□□ 0.85
TRAPPC4-203ENST00000447216 GNPTABQ3T906 1256 aa20.39■□□□□ 0.85
TRAPPC4-203ENST00000447216 TMEM63BQ5T3F8 832 aa20.39■□□□□ 0.85
TRAPPC4-203ENST00000447216 SLAIN1Q8ND83 568 aa20.39■□□□□ 0.85
TRAPPC4-203ENST00000447216 PXYLP1Q8TE99 480 aa20.39■□□□□ 0.85
TRAPPC4-203ENST00000447216 KCNH7Q9NS40 1196 aa20.39■□□□□ 0.85
TRAPPC4-203ENST00000447216 ATP6V1DQ9Y5K8 247 aa20.39■□□□□ 0.85
TRAPPC4-203ENST00000447216 SPATA31C2B4DYI2 1134 aa20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 MSH4O15457 936 aa20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 FIBPO43427 364 aa20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 SORBS3O60504 671 aa20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 ARIH2O95376 493 aa20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 ZNF865P0CJ78 1059 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 PTGS1P23219 599 aa20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 ADCYAP1R1P41586 468 aa20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 SETQ01105 290 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 PTGDRQ13258 359 aa20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 CALCRLQ16602 461 aa20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 C4orf32Q8N8J7 132 aa20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 ETNPPLQ8TBG4 499 aa20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 SH3TC2Q8TF17 1288 aa20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 AGO4Q9HCK5 861 aaKnown RBP20.38■□□□□ 0.85
TRAPPC4-203ENST00000447216 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 RBM47A0AV96 593 aaKnown RBP20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 ATP9AO75110 1047 aa20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 INHAP05111 366 aa20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 CYBAP13498 195 aa20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 PRKAR2AP13861 404 aaKnown RBP20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 ICAM3P32942 547 aa20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 SP2Q02086 613 aa20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 ORC2Q13416 577 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 PTPAQ15257 358 aa20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 LY6KQ17RY6 165 aa20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 CCDC144BQ3MJ40 725 aa20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 GJC2Q5T442 439 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 HAS1Q92839 578 aa20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 ZNF577Q9BSK1 485 aa20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 BCAS3Q9H6U6 928 aa20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 KCNMB3Q9NPA1 279 aa20.37■□□□□ 0.85
TRAPPC4-203ENST00000447216 MARCH6O60337 910 aa20.36■□□□□ 0.85
TRAPPC4-203ENST00000447216 OR52Z1P0C646 297 aa20.36■□□□□ 0.85
TRAPPC4-203ENST00000447216 NASPP49321 788 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC4-203ENST00000447216 KRT85P78386 507 aa20.36■□□□□ 0.85
TRAPPC4-203ENST00000447216 ATP2C1P98194 919 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC4-203ENST00000447216 STK38Q15208 465 aa20.36■□□□□ 0.85
TRAPPC4-203ENST00000447216 CCDC62Q6P9F0 684 aa20.36■□□□□ 0.85
TRAPPC4-203ENST00000447216 SCFD2Q8WU76 684 aa20.36■□□□□ 0.85
TRAPPC4-203ENST00000447216 COPS5Q92905 334 aa20.36■□□□□ 0.85
TRAPPC4-203ENST00000447216 POLR3EQ9NVU0 708 aa20.36■□□□□ 0.85
TRAPPC4-203ENST00000447216 FRMPD3Q5JV73 1810 aa20.36■□□□□ 0.85
TRAPPC4-203ENST00000447216 DDX39AO00148 427 aaKnown RBP20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 ADCY6O43306 1168 aa20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 TXNP10599 105 aaKnown RBP20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 KCNA2P16389 499 aa20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 UBA1P22314 1058 aaKnown RBP20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 MARCKSP29966 332 aaPredicted RBP20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 CNGA1P29973 690 aa20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 CCND3P30281 292 aaPredicted RBP20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 ITGB3BPQ13352 177 aaPredicted RBP20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 TTLL4Q14679 1199 aa20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 ATL3Q6DD88 541 aa20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 SLC5A5Q92911 643 aa20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 LENG1Q96BZ8 264 aaPredicted RBP20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 CDHR1Q96JP9 859 aa20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 MTMR9Q96QG7 549 aa20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 GDPD2Q9HCC8 539 aa20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 PRDM10Q9NQV6 1147 aa20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 DDX41Q9UJV9 622 aaKnown RBP20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 CEP131Q9UPN4 1083 aa20.35■□□□□ 0.85
TRAPPC4-203ENST00000447216 IPO5O00410 1097 aaKnown RBP20.34■□□□□ 0.85
TRAPPC4-203ENST00000447216 SMPD1P17405 629 aa20.34■□□□□ 0.85
TRAPPC4-203ENST00000447216 TXKP42681 527 aa20.34■□□□□ 0.85
TRAPPC4-203ENST00000447216 SLC39A14Q15043 492 aa20.34■□□□□ 0.85
TRAPPC4-203ENST00000447216 SLC9C1Q4G0N8 1177 aa20.34■□□□□ 0.85
TRAPPC4-203ENST00000447216 MAP3K21Q5TCX8 1036 aa20.34■□□□□ 0.85
TRAPPC4-203ENST00000447216 IQSEC1Q6DN90 963 aa20.34■□□□□ 0.85
TRAPPC4-203ENST00000447216 FBXO46Q6PJ61 603 aaPredicted RBP20.34■□□□□ 0.85
TRAPPC4-203ENST00000447216 LINC00301Q8NCQ3 95 aa20.34■□□□□ 0.85
TRAPPC4-203ENST00000447216 NRBP1Q9UHY1 535 aa20.34■□□□□ 0.85
TRAPPC4-203ENST00000447216 CFAP45Q9UL16 551 aa20.34■□□□□ 0.85
TRAPPC4-203ENST00000447216 MYH9P35579 1960 aaKnown RBP20.34■□□□□ 0.85
TRAPPC4-203ENST00000447216 MAFGO15525 162 aa20.33■□□□□ 0.85
TRAPPC4-203ENST00000447216 DHX15O43143 795 aaKnown RBP20.33■□□□□ 0.85
TRAPPC4-203ENST00000447216 BAG4O95429 457 aaKnown RBP20.33■□□□□ 0.85
TRAPPC4-203ENST00000447216 YEATS4O95619 227 aa20.33■□□□□ 0.85
TRAPPC4-203ENST00000447216 GGPS1O95749 300 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms