RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 RXRAP19793 462 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 ICAM3P32942 547 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 PSEN2P49810 448 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 GNAQP50148 359 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 CHMP4BP1P59074 171 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 RBL2Q08999 1139 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 BFSP2Q13515 415 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 RAB30Q15771 203 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 DEFB128Q7Z7B8 93 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 LRRC2Q9BYS8 371 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 BCAS3Q9H6U6 928 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 XIRP2A4UGR9 3374 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 DLL1O00548 723 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 STAM2O75886 525 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 SEMA3FQ13275 785 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 MFSD10Q14728 455 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 GPNMBQ14956 572 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 KIAA0753Q2KHM9 967 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 USP17L6PQ6QN14 398 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 NFXL1Q6ZNB6 911 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 CMTR1Q8N1G2 835 aaKnown RBP18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 CAGE1Q8TC20 777 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 SPATA33Q96N06 139 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 KATNAL1Q9BW62 490 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 HDAC6Q9UBN7 1215 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 NOD1Q9Y239 953 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 SLC4A7Q9Y6M7 1214 aa18.3■□□□□ 0.52
SPTLC1P1-201ENST00000447199 TANC1Q9C0D5 1861 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 SPATA31C2B4DYI2 1134 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 CALM1P0DP23 149 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 CALM2P0DP24 149 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 CALM3P0DP25 149 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 EXOSC10Q01780 885 aaKnown RBP18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 HIC1Q14526 733 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 TSGA10IPQ3SY00 556 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 TMTC3Q6ZXV5 915 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 RASEFQ8IZ41 740 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 C7orf31Q8N865 590 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 RETREG2Q8NC44 543 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 AFAP1L1Q8TED9 768 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 C16orf70Q9BSU1 422 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 SEC63Q9UGP8 760 aaKnown RBP18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 MSRAQ9UJ68 235 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 SLC12A7Q9Y666 1083 aa18.29■□□□□ 0.52
SPTLC1P1-201ENST00000447199 SORBS3O60504 671 aa18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 RABGGTBP53611 331 aa18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 TRIM71Q2Q1W2 868 aaKnown RBP18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 GNPTABQ3T906 1256 aa18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 RNF20Q5VTR2 975 aa18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 PCNX4Q63HM2 1172 aa18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 RAB11FIP4Q86YS3 637 aa18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 CCDC155Q8N6L0 562 aa18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 FANCBQ8NB91 859 aa18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 ALG1Q9BT22 464 aa18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 NKX2-4Q9H2Z4 354 aa18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 REV3LO60673 3130 aa18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 SCN5AQ14524 2016 aa18.28■□□□□ 0.52
SPTLC1P1-201ENST00000447199 ZBBXA8MT70 800 aa18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 CDC45O75419 566 aa18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 SELPP16109 830 aa18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 ATP2A2P16615 1042 aaKnown RBP18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 HOXC8P31273 242 aa18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 XRRA1Q6P2D8 792 aa18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 TRAF7Q6Q0C0 670 aa18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 SMARCC2Q8TAQ2 1214 aa18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 WNT8BQ93098 351 aa18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 NEK1Q96PY6 1258 aa18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 PRDM12Q9H4Q4 367 aa18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 MLXIPQ9HAP2 919 aa18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 PCDHA11Q9Y5I1 949 aa18.27■□□□□ 0.52
SPTLC1P1-201ENST00000447199 hCG_1642624A0A1W2PR95 340 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 FIBPO43427 364 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 CXCL10P02778 98 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 CKBP12277 381 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 MYOGP15173 224 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 ZNF200P98182 395 aaPredicted RBP18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 FUT2Q10981 343 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 PTK7Q13308 1070 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 ADCK5Q3MIX3 580 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 APOA5Q6Q788 366 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 METTL7BQ6UX53 244 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 LRRC8DQ7L1W4 858 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 MICU3Q86XE3 530 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 USP38Q8NB14 1042 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 CUL5Q93034 780 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 PSTPIP2Q9H939 334 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 RTEL1Q9NZ71 1219 aa18.26■□□□□ 0.51
SPTLC1P1-201ENST00000447199 NBNO60934 754 aa18.25■□□□□ 0.51
SPTLC1P1-201ENST00000447199 LGALS2P05162 132 aa18.25■□□□□ 0.51
SPTLC1P1-201ENST00000447199 ACTN1P12814 892 aa18.25■□□□□ 0.51
SPTLC1P1-201ENST00000447199 ADGRE1Q14246 886 aa18.25■□□□□ 0.51
SPTLC1P1-201ENST00000447199 NEDD9Q14511 834 aa18.25■□□□□ 0.51
SPTLC1P1-201ENST00000447199 CYFIP1Q7L576 1253 aa18.25■□□□□ 0.51
SPTLC1P1-201ENST00000447199 DHX32Q7L7V1 743 aaKnown RBP18.25■□□□□ 0.51
SPTLC1P1-201ENST00000447199 CCDC82Q8N4S0 544 aa18.25■□□□□ 0.51
SPTLC1P1-201ENST00000447199 PHOSPHO2Q8TCD6 241 aa18.25■□□□□ 0.51
SPTLC1P1-201ENST00000447199 GPR20Q99678 358 aa18.25■□□□□ 0.51
SPTLC1P1-201ENST00000447199 SENP7Q9BQF6 1050 aa18.25■□□□□ 0.51
SPTLC1P1-201ENST00000447199 SLC28A3Q9HAS3 691 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms