RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 PTPRSQ13332 1948 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 TET1Q8NFU7 2136 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 RBAK-RBAKDNI3L0D1 243 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 HAS3O00219 553 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 PLEKHA8P1O95397 391 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 ACTN1P12814 892 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 RXRAP19793 462 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 MCM5P33992 734 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 ADGRE1Q14246 886 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 PPP2R2DQ66LE6 453 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 KCNV1Q6PIU1 500 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 CCDC155Q8N6L0 562 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 C7orf31Q8N865 590 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 CAGE1Q8TC20 777 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 AFAP1L1Q8TED9 768 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 SPATA33Q96N06 139 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 MTA3Q9BTC8 594 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 FTOQ9C0B1 505 aaKnown RBP eCLIP21.04■□□□□ 0.96
COL9A1-205ENST00000447041 ANO2Q9NQ90 1003 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 PCDHA11Q9Y5I1 949 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 DOCK5Q9H7D0 1870 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 CHD7Q9P2D1 2997 aa21.04■□□□□ 0.96
COL9A1-205ENST00000447041 KIF5BP33176 963 aa21.03■□□□□ 0.96
COL9A1-205ENST00000447041 MRPS9P82933 396 aaKnown RBP21.03■□□□□ 0.96
COL9A1-205ENST00000447041 CREB3L3Q68CJ9 461 aa21.03■□□□□ 0.96
COL9A1-205ENST00000447041 NFXL1Q6ZNB6 911 aa21.03■□□□□ 0.96
COL9A1-205ENST00000447041 RAB11FIP4Q86YS3 637 aa21.03■□□□□ 0.96
COL9A1-205ENST00000447041 CMTR1Q8N1G2 835 aaKnown RBP21.03■□□□□ 0.96
COL9A1-205ENST00000447041 RRP36Q96EU6 259 aaKnown RBP21.03■□□□□ 0.96
COL9A1-205ENST00000447041 BCAS3Q9H6U6 928 aa21.03■□□□□ 0.96
COL9A1-205ENST00000447041 CCDC69A6NI79 296 aa21.02■□□□□ 0.96
COL9A1-205ENST00000447041 HIC1Q14526 733 aa21.02■□□□□ 0.96
COL9A1-205ENST00000447041 GPNMBQ14956 572 aa21.02■□□□□ 0.96
COL9A1-205ENST00000447041 NECTIN1Q15223 517 aa21.02■□□□□ 0.96
COL9A1-205ENST00000447041 LRRC8DQ7L1W4 858 aa21.02■□□□□ 0.96
COL9A1-205ENST00000447041 SRBD1Q8N5C6 995 aaKnown RBP21.02■□□□□ 0.96
COL9A1-205ENST00000447041 PPM1EQ8WY54 764 aa21.02■□□□□ 0.96
COL9A1-205ENST00000447041 WNT8BQ93098 351 aa21.02■□□□□ 0.96
COL9A1-205ENST00000447041 TMEM87BQ96K49 555 aa21.02■□□□□ 0.96
COL9A1-205ENST00000447041 SLC9A7Q96T83 725 aa21.02■□□□□ 0.96
COL9A1-205ENST00000447041 LRRC2Q9BYS8 371 aa21.02■□□□□ 0.96
COL9A1-205ENST00000447041 PPFIA4O75335 1185 aa21.01■□□□□ 0.95
COL9A1-205ENST00000447041 TGFB3P10600 412 aa21.01■□□□□ 0.95
COL9A1-205ENST00000447041 CKBP12277 381 aa21.01■□□□□ 0.95
COL9A1-205ENST00000447041 SELPP16109 830 aa21.01■□□□□ 0.95
COL9A1-205ENST00000447041 ZNF200P98182 395 aaPredicted RBP21.01■□□□□ 0.95
COL9A1-205ENST00000447041 RBL2Q08999 1139 aa21.01■□□□□ 0.95
COL9A1-205ENST00000447041 SEMA3FQ13275 785 aa21.01■□□□□ 0.95
COL9A1-205ENST00000447041 USP17L6PQ6QN14 398 aa21.01■□□□□ 0.95
COL9A1-205ENST00000447041 MLXIPQ9HAP2 919 aa21.01■□□□□ 0.95
COL9A1-205ENST00000447041 PRDM6Q9NQX0 595 aa21.01■□□□□ 0.95
COL9A1-205ENST00000447041 RTEL1Q9NZ71 1219 aa21.01■□□□□ 0.95
COL9A1-205ENST00000447041 SEC63Q9UGP8 760 aaKnown RBP21.01■□□□□ 0.95
COL9A1-205ENST00000447041 MEIS2O14770 477 aa21■□□□□ 0.95
COL9A1-205ENST00000447041 CA3P07451 260 aa21■□□□□ 0.95
COL9A1-205ENST00000447041 IGFBP4P22692 258 aa21■□□□□ 0.95
COL9A1-205ENST00000447041 SMARCA1P28370 1054 aa21■□□□□ 0.95
COL9A1-205ENST00000447041 GNPTABQ3T906 1256 aa21■□□□□ 0.95
COL9A1-205ENST00000447041 SMARCC2Q8TAQ2 1214 aa21■□□□□ 0.95
COL9A1-205ENST00000447041 INPP4AQ96PE3 977 aaPredicted RBP21■□□□□ 0.95
COL9A1-205ENST00000447041 LZTS2Q9BRK4 669 aa21■□□□□ 0.95
COL9A1-205ENST00000447041 C16orf70Q9BSU1 422 aa21■□□□□ 0.95
COL9A1-205ENST00000447041 NBNO60934 754 aa20.99■□□□□ 0.95
COL9A1-205ENST00000447041 ICAM3P32942 547 aa20.99■□□□□ 0.95
COL9A1-205ENST00000447041 LIFRP42702 1097 aa20.99■□□□□ 0.95
COL9A1-205ENST00000447041 PTK7Q13308 1070 aa20.99■□□□□ 0.95
COL9A1-205ENST00000447041 TRIM71Q2Q1W2 868 aaKnown RBP20.99■□□□□ 0.95
COL9A1-205ENST00000447041 BMP2KLQ5H9B9 411 aa20.99■□□□□ 0.95
COL9A1-205ENST00000447041 TMTC2Q8N394 836 aa20.99■□□□□ 0.95
COL9A1-205ENST00000447041 hCG_1642624A0A1W2PR95 340 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 PIK3CDO00329 1044 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 STAM2O75886 525 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 BAIAP3O94812 1187 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 ARHGEF15O94989 841 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 LGALS2P05162 132 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 GNAQP50148 359 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 CCDC85BQ15834 202 aaPredicted RBP20.98■□□□□ 0.95
COL9A1-205ENST00000447041 TCTN1Q2MV58 587 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 TRAF7Q6Q0C0 670 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 CENPQQ7L2Z9 268 aaPredicted RBP20.98■□□□□ 0.95
COL9A1-205ENST00000447041 HERC6Q8IVU3 1022 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 PHOSPHO2Q8TCD6 241 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 CUL5Q93034 780 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 TELO2Q9Y4R8 837 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 SLC12A7Q9Y666 1083 aa20.98■□□□□ 0.95
COL9A1-205ENST00000447041 CUL9Q8IWT3 2517 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 SPATA31C2B4DYI2 1134 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 FIBPO43427 364 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 CXCL10P02778 98 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 CALM1P0DP23 149 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 CALM2P0DP24 149 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 CALM3P0DP25 149 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 WDR5P61964 334 aaKnown RBP20.97■□□□□ 0.95
COL9A1-205ENST00000447041 ZNF618Q5T7W0 954 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 PCNX4Q63HM2 1172 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 CNKSR3Q6P9H4 555 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 METTL7BQ6UX53 244 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 CYFIP1Q7L576 1253 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 TMCO2Q7Z6W1 182 aaPredicted RBP20.97■□□□□ 0.95
COL9A1-205ENST00000447041 MICU3Q86XE3 530 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms