RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 NLRC4Q9NPP4 1024 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 SALL4Q9UJQ4 1053 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 PCDHA12Q9UN75 941 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 FAM196BA6NMK8 535 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 PPEF1O14829 653 aaPredicted RBP13.97□□□□□ -0.17
TRO-215ENST00000445561 ADRA2BP18089 450 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 NFIAQ12857 509 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 HSP90B2PQ58FF3 399 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 CCDC84Q86UT8 332 aaPredicted RBP13.97□□□□□ -0.17
TRO-215ENST00000445561 MYOCDQ8IZQ8 938 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 TRIM58Q8NG06 486 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 PANK4Q9NVE7 773 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 SNX12Q9UMY4 172 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 TRAF5O00463 557 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 ZBTB5O15062 677 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 TACC1O75410 805 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 FGFR1OPO95684 399 aaKnown RBP13.96□□□□□ -0.17
TRO-215ENST00000445561 KCNMA1Q12791 1236 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 EZH2Q15910 746 aaKnown RBP13.96□□□□□ -0.17
TRO-215ENST00000445561 ZSCAN26Q16670 478 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 NFRKBQ6P4R8 1299 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 CACNA2D4Q7Z3S7 1137 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 CREG2Q8IUH2 290 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 ZFPM1Q8IX07 1006 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 MSL3Q8N5Y2 521 aaKnown RBP13.96□□□□□ -0.17
TRO-215ENST00000445561 TSG101Q99816 390 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 EHD2Q9NZN4 543 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 KIAA1024Q9UPX6 916 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 JRKLQ9Y4A0 524 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 POTEB3A0JP26 581 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 POTECB2RU33 542 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 NCK2O43639 380 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 HOXA10P31260 410 aaPredicted RBP13.96□□□□□ -0.17
TRO-215ENST00000445561 MATR3P43243 847 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRO-215ENST00000445561 POTEBQ6S5H4 581 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 TMC4Q7Z404 712 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 HDAC7Q8WUI4 952 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 RIN2Q8WYP3 895 aaPredicted RBP13.96□□□□□ -0.17
TRO-215ENST00000445561 CRACR2AQ9BSW2 395 aa13.96□□□□□ -0.17
TRO-215ENST00000445561 POLRMTO00411 1230 aaKnown RBP13.95□□□□□ -0.18
TRO-215ENST00000445561 STAT3P40763 770 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 MRPL12P52815 198 aaKnown RBP13.95□□□□□ -0.18
TRO-215ENST00000445561 CACNB3P54284 484 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 RASSF7Q02833 373 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 CCDC40Q4G0X9 1142 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 TDRD12Q587J7 1177 aaKnown RBP13.95□□□□□ -0.18
TRO-215ENST00000445561 FAM26FQ5R3K3 315 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 CDC42EP5Q6NZY7 148 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 RPGRIP1Q96KN7 1286 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 COL4A3BPQ9Y5P4 624 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 THSD7AQ9UPZ6 1657 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 TARSL2A2RTX5 802 aaKnown RBP13.95□□□□□ -0.18
TRO-215ENST00000445561 BUB1O43683 1085 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 SLC1A4P43007 532 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 MAGEA1P43355 309 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 PSMD2Q13200 908 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 ZCWPW2Q504Y3 356 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 PPP1R18Q6NYC8 613 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 PDXDC1Q6P996 788 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 FAM71BQ8TC56 605 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 IQCDQ96DY2 449 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 COA1Q9GZY4 146 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 PSD3Q9NYI0 1048 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 HPCAL4Q9UM19 191 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 PCDHAC2Q9Y5I4 1007 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 ABCB11O95342 1321 aa13.95□□□□□ -0.18
TRO-215ENST00000445561 UBAP1LF5GYI3 381 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 LCA5LO95447 670 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 SYF2O95926 243 aaKnown RBP13.94□□□□□ -0.18
TRO-215ENST00000445561 CAPN2P17655 700 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 SNAP25P60880 206 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 FKBP3Q00688 224 aaKnown RBP13.94□□□□□ -0.18
TRO-215ENST00000445561 MAP9Q49MG5 647 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 GJD4Q96KN9 370 aaPredicted RBP13.94□□□□□ -0.18
TRO-215ENST00000445561 CRAMP1Q96RY5 1269 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 ZC3H12CQ9C0D7 883 aaKnown RBP13.94□□□□□ -0.18
TRO-215ENST00000445561 LRRC27Q9C0I9 530 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 ZHX3Q9H4I2 956 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 SWAP70Q9UH65 585 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 RNF40O75150 1001 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 TCP10Q12799 353 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 QRICH1Q2TAL8 776 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 ASTE1Q2TB18 679 aaPredicted RBP13.94□□□□□ -0.18
TRO-215ENST00000445561 GPATCH4Q5T3I0 446 aaKnown RBP13.94□□□□□ -0.18
TRO-215ENST00000445561 HGSNATQ68CP4 663 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 CCNI2Q6ZMN8 369 aaPredicted RBP13.94□□□□□ -0.18
TRO-215ENST00000445561 MTMR8Q96EF0 704 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 OSBPL9Q96SU4 736 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 LRRC1Q9BTT6 524 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 FAM204AQ9H8W3 233 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 MYH7BA7E2Y1 1941 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 FOCADQ5VW36 1801 aa13.94□□□□□ -0.18
TRO-215ENST00000445561 MYH10P35580 1976 aa13.93□□□□□ -0.18
TRO-215ENST00000445561 NOL4O94818 638 aa13.93□□□□□ -0.18
TRO-215ENST00000445561 PLA2G4BP0C869 781 aa13.93□□□□□ -0.18
TRO-215ENST00000445561 MCM3P25205 808 aa13.93□□□□□ -0.18
TRO-215ENST00000445561 NAP1L1P55209 391 aaKnown RBP13.93□□□□□ -0.18
TRO-215ENST00000445561 SLC7A5Q01650 507 aa13.93□□□□□ -0.18
TRO-215ENST00000445561 ARID5AQ03989 594 aa13.93□□□□□ -0.18
TRO-215ENST00000445561 ENOX2Q16206 610 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms