RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 GTF2IRD1Q9UHL9 959 aa16.62■□□□□ 0.25
LINC01006-204ENST00000435354 PCDHA11Q9Y5I1 949 aa16.62■□□□□ 0.25
LINC01006-204ENST00000435354 PTPRSQ13332 1948 aa16.62■□□□□ 0.25
LINC01006-204ENST00000435354 DOCK5Q9H7D0 1870 aa16.61■□□□□ 0.25
LINC01006-204ENST00000435354 RBAK-RBAKDNI3L0D1 243 aa16.61■□□□□ 0.25
LINC01006-204ENST00000435354 SH2B2O14492 632 aaPredicted RBP16.61■□□□□ 0.25
LINC01006-204ENST00000435354 MRPS9P82933 396 aaKnown RBP16.61■□□□□ 0.25
LINC01006-204ENST00000435354 RBL2Q08999 1139 aa16.61■□□□□ 0.25
LINC01006-204ENST00000435354 HIC1Q14526 733 aa16.61■□□□□ 0.25
LINC01006-204ENST00000435354 KIAA0753Q2KHM9 967 aa16.61■□□□□ 0.25
LINC01006-204ENST00000435354 C7orf31Q8N865 590 aa16.61■□□□□ 0.25
LINC01006-204ENST00000435354 CAGE1Q8TC20 777 aa16.61■□□□□ 0.25
LINC01006-204ENST00000435354 AFAP1L1Q8TED9 768 aa16.61■□□□□ 0.25
LINC01006-204ENST00000435354 SPATA33Q96N06 139 aa16.61■□□□□ 0.25
LINC01006-204ENST00000435354 GAS2L1Q99501 681 aaPredicted RBP16.61■□□□□ 0.25
LINC01006-204ENST00000435354 MTA3Q9BTC8 594 aa16.61■□□□□ 0.25
LINC01006-204ENST00000435354 KATNAL1Q9BW62 490 aa16.61■□□□□ 0.25
LINC01006-204ENST00000435354 BCAS3Q9H6U6 928 aa16.61■□□□□ 0.25
LINC01006-204ENST00000435354 TTC28Q96AY4 2481 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 PPFIA4O75335 1185 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 PLEKHA8P1O95397 391 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 TGFB3P10600 412 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 ACTN1P12814 892 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 SELPP16109 830 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 MCM5P33992 734 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 NECTIN1Q15223 517 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 PPP2R2DQ66LE6 453 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 CREB3L3Q68CJ9 461 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 CASC1Q6TDU7 716 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 LRRC8DQ7L1W4 858 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 CCDC155Q8N6L0 562 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 CTCFLQ8NI51 663 aaPredicted RBP16.6■□□□□ 0.25
LINC01006-204ENST00000435354 WNT8BQ93098 351 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 C16orf70Q9BSU1 422 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 FTOQ9C0B1 505 aaKnown RBP eCLIP16.6■□□□□ 0.255e-7■■□□□ 13.1
LINC01006-204ENST00000435354 PRDM6Q9NQX0 595 aa16.6■□□□□ 0.25
LINC01006-204ENST00000435354 CKBP12277 381 aa16.59■□□□□ 0.25
LINC01006-204ENST00000435354 RXRAP19793 462 aa16.59■□□□□ 0.25
LINC01006-204ENST00000435354 SMARCA1P28370 1054 aa16.59■□□□□ 0.25
LINC01006-204ENST00000435354 KIF5BP33176 963 aa16.59■□□□□ 0.25
LINC01006-204ENST00000435354 ZNF200P98182 395 aaPredicted RBP16.59■□□□□ 0.25
LINC01006-204ENST00000435354 SEMA3FQ13275 785 aa16.59■□□□□ 0.25
LINC01006-204ENST00000435354 TRIM71Q2Q1W2 868 aaKnown RBP16.59■□□□□ 0.25
LINC01006-204ENST00000435354 TRAF7Q6Q0C0 670 aa16.59■□□□□ 0.25
LINC01006-204ENST00000435354 SRBD1Q8N5C6 995 aaKnown RBP16.59■□□□□ 0.25
LINC01006-204ENST00000435354 RRP36Q96EU6 259 aaKnown RBP16.59■□□□□ 0.25
LINC01006-204ENST00000435354 TMEM87BQ96K49 555 aa16.59■□□□□ 0.25
LINC01006-204ENST00000435354 INPP4AQ96PE3 977 aaPredicted RBP16.59■□□□□ 0.25
LINC01006-204ENST00000435354 SLC9A7Q96T83 725 aa16.59■□□□□ 0.25
LINC01006-204ENST00000435354 NBNO60934 754 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 ARHGEF15O94989 841 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 CA3P07451 260 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 ICAM3P32942 547 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 PTK7Q13308 1070 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 TCTN1Q2MV58 587 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 BMP2KLQ5H9B9 411 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 USP17L6PQ6QN14 398 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 NFXL1Q6ZNB6 911 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 CMTR1Q8N1G2 835 aaKnown RBP16.58■□□□□ 0.24
LINC01006-204ENST00000435354 TMTC2Q8N394 836 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 PHOSPHO2Q8TCD6 241 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 LZTS2Q9BRK4 669 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 ANO2Q9NQ90 1003 aa16.58■□□□□ 0.24
LINC01006-204ENST00000435354 SPATA31C2B4DYI2 1134 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 PIK3CDO00329 1044 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 MEIS2O14770 477 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 STAM2O75886 525 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 BAIAP3O94812 1187 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 CXCL10P02778 98 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 IGFBP4P22692 258 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 LIFRP42702 1097 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 GNAQP50148 359 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 MBTPS1Q14703 1052 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 RAB11FIP4Q86YS3 637 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 HERC6Q8IVU3 1022 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 PPM1EQ8WY54 764 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 LRRC2Q9BYS8 371 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 MLXIPQ9HAP2 919 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 RTEL1Q9NZ71 1219 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 TELO2Q9Y4R8 837 aa16.57■□□□□ 0.24
LINC01006-204ENST00000435354 PRRC2BQ5JSZ5 2229 aaKnown RBP16.56■□□□□ 0.24
LINC01006-204ENST00000435354 CCDC69A6NI79 296 aa16.56■□□□□ 0.24
LINC01006-204ENST00000435354 HOXC8P31273 242 aa16.56■□□□□ 0.24
LINC01006-204ENST00000435354 GNPTABQ3T906 1256 aa16.56■□□□□ 0.24
LINC01006-204ENST00000435354 ZNF618Q5T7W0 954 aa16.56■□□□□ 0.24
LINC01006-204ENST00000435354 PCNX4Q63HM2 1172 aa16.56■□□□□ 0.24
LINC01006-204ENST00000435354 SMARCC2Q8TAQ2 1214 aa16.56■□□□□ 0.24
LINC01006-204ENST00000435354 SEC63Q9UGP8 760 aaKnown RBP16.56■□□□□ 0.24
LINC01006-204ENST00000435354 SPTBN5Q9NRC6 3674 aaKnown RBP16.55■□□□□ 0.24
LINC01006-204ENST00000435354 hCG_1642624A0A1W2PR95 340 aa16.55■□□□□ 0.24
LINC01006-204ENST00000435354 H3BRB1 525 aa16.55■□□□□ 0.24
LINC01006-204ENST00000435354 FIBPO43427 364 aa16.55■□□□□ 0.24
LINC01006-204ENST00000435354 PARNO95453 639 aaKnown RBP16.55■□□□□ 0.24
LINC01006-204ENST00000435354 LGALS2P05162 132 aa16.55■□□□□ 0.24
LINC01006-204ENST00000435354 CALM1P0DP23 149 aa16.55■□□□□ 0.24
LINC01006-204ENST00000435354 CALM2P0DP24 149 aa16.55■□□□□ 0.24
LINC01006-204ENST00000435354 CALM3P0DP25 149 aa16.55■□□□□ 0.24
LINC01006-204ENST00000435354 WDR5P61964 334 aaKnown RBP16.55■□□□□ 0.24
LINC01006-204ENST00000435354 CCDC85BQ15834 202 aaPredicted RBP16.55■□□□□ 0.24
LINC01006-204ENST00000435354 CNKSR3Q6P9H4 555 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms