RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 DDX49Q9Y6V7 483 aaKnown RBP29.9■■■□□ 2.38
TMEM248-205ENST00000433271 ECM2O94769 699 aaPredicted RBP29.89■■■□□ 2.38
TMEM248-205ENST00000433271 TECP42680 631 aa29.89■■■□□ 2.38
TMEM248-205ENST00000433271 FCGRTP55899 365 aa29.89■■■□□ 2.38
TMEM248-205ENST00000433271 SP3Q02447 781 aa29.89■■■□□ 2.38
TMEM248-205ENST00000433271 MAP2K5Q13163 448 aa29.89■■■□□ 2.38
TMEM248-205ENST00000433271 MRPS27Q92552 414 aaKnown RBP29.89■■■□□ 2.38
TMEM248-205ENST00000433271 SLC5A5Q92911 643 aa29.89■■■□□ 2.38
TMEM248-205ENST00000433271 ZNF577Q9BSK1 485 aa29.89■■■□□ 2.38
TMEM248-205ENST00000433271 SAGE1Q9NXZ1 904 aa29.89■■■□□ 2.38
TMEM248-205ENST00000433271 RGS20O76081 388 aa29.89■■■□□ 2.37
TMEM248-205ENST00000433271 PDIA5Q14554 519 aa29.89■■■□□ 2.37
TMEM248-205ENST00000433271 GNPTABQ3T906 1256 aa29.89■■■□□ 2.37
TMEM248-205ENST00000433271 FSIP1Q8NA03 581 aa29.89■■■□□ 2.37
TMEM248-205ENST00000433271 SOCS4Q8WXH5 440 aa29.89■■■□□ 2.37
TMEM248-205ENST00000433271 USP6NLQ92738 828 aa29.89■■■□□ 2.37
TMEM248-205ENST00000433271 GJA10Q969M2 543 aa29.89■■■□□ 2.37
TMEM248-205ENST00000433271 NUDT12Q9BQG2 462 aa29.89■■■□□ 2.37
TMEM248-205ENST00000433271 RAB34Q9BZG1 259 aa29.89■■■□□ 2.37
TMEM248-205ENST00000433271 IPO5O00410 1097 aaKnown RBP29.88■■■□□ 2.37
TMEM248-205ENST00000433271 CTGFP29279 349 aa29.88■■■□□ 2.37
TMEM248-205ENST00000433271 PSMC4P43686 418 aa29.88■■■□□ 2.37
TMEM248-205ENST00000433271 SPECC1Q5M775 1068 aa29.88■■■□□ 2.37
TMEM248-205ENST00000433271 IGSF22Q8N9C0 903 aa29.88■■■□□ 2.37
TMEM248-205ENST00000433271 CDHR1Q96JP9 859 aa29.88■■■□□ 2.37
TMEM248-205ENST00000433271 AK8Q96MA6 479 aa29.88■■■□□ 2.37
TMEM248-205ENST00000433271 UIMC1Q96RL1 719 aa29.88■■■□□ 2.37
TMEM248-205ENST00000433271 AGO4Q9HCK5 861 aaKnown RBP29.88■■■□□ 2.37
TMEM248-205ENST00000433271 GJD2Q9UKL4 321 aa29.88■■■□□ 2.37
TMEM248-205ENST00000433271 HOXC6P09630 235 aa29.87■■■□□ 2.37
TMEM248-205ENST00000433271 DOCK3Q8IZD9 2030 aa29.87■■■□□ 2.37
TMEM248-205ENST00000433271 PLXNA1Q9UIW2 1896 aa29.87■■■□□ 2.37
TMEM248-205ENST00000433271 TRAK2O60296 914 aa29.86■■■□□ 2.37
TMEM248-205ENST00000433271 MAMDC4Q6UXC1 1216 aa29.86■■■□□ 2.37
TMEM248-205ENST00000433271 MAML3Q96JK9 1138 aa29.86■■■□□ 2.37
TMEM248-205ENST00000433271 TRIM47Q96LD4 638 aa29.86■■■□□ 2.37
TMEM248-205ENST00000433271 RIT2Q99578 217 aa29.86■■■□□ 2.37
TMEM248-205ENST00000433271 FAM237AA0A1B0GTK4 181 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 PSMD10O75832 226 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 MAP2K1Q02750 393 aaPredicted RBP29.85■■■□□ 2.37
TMEM248-205ENST00000433271 KIF22Q14807 665 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 ARMCX2Q7L311 632 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 NPLOC4Q8TAT6 608 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 GOLPH3LQ9H4A5 285 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 FAM13BQ9NYF5 915 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 A0A1B0GVL5 298 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 SPATA31C2B4DYI2 1134 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 ICAM3P32942 547 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 KLHL40Q2TBA0 621 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 LRCH2Q5VUJ6 765 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 CCDC73Q6ZRK6 1079 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 USP49Q70CQ1 688 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 MSL3Q8N5Y2 521 aaKnown RBP29.85■■■□□ 2.37
TMEM248-205ENST00000433271 SYMPKQ92797 1274 aaKnown RBP29.85■■■□□ 2.37
TMEM248-205ENST00000433271 EPSTI1Q96J88 318 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 ARHGAP39Q9C0H5 1083 aa29.85■■■□□ 2.37
TMEM248-205ENST00000433271 GAS7O60861 476 aa29.84■■■□□ 2.37
TMEM248-205ENST00000433271 PFKFB1P16118 471 aa29.84■■■□□ 2.37
TMEM248-205ENST00000433271 LIG1P18858 919 aa29.84■■■□□ 2.37
TMEM248-205ENST00000433271 RGS2P41220 211 aa29.84■■■□□ 2.37
TMEM248-205ENST00000433271 SEMA3FQ13275 785 aa29.84■■■□□ 2.37
TMEM248-205ENST00000433271 TBC1D22BQ9NU19 505 aa29.84■■■□□ 2.37
TMEM248-205ENST00000433271 LRWD1Q9UFC0 647 aa29.84■■■□□ 2.37
TMEM248-205ENST00000433271 VAV3Q9UKW4 847 aa29.84■■■□□ 2.37
TMEM248-205ENST00000433271 HPSEQ9Y251 543 aa29.84■■■□□ 2.37
TMEM248-205ENST00000433271 MGAMO43451 1857 aa29.84■■■□□ 2.37
TMEM248-205ENST00000433271 GPR25O00155 361 aa29.83■■■□□ 2.37
TMEM248-205ENST00000433271 NDUFA8P51970 172 aa29.83■■■□□ 2.37
TMEM248-205ENST00000433271 FAM160A1Q05DH4 1040 aa29.83■■■□□ 2.37
TMEM248-205ENST00000433271 SPIRE1Q08AE8 756 aa29.83■■■□□ 2.37
TMEM248-205ENST00000433271 ITGB3BPQ13352 177 aaPredicted RBP29.82■■■□□ 2.36
TMEM248-205ENST00000433271 SEPT14Q6ZU15 432 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 OTOP1Q7RTM1 612 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 TINF2Q9BSI4 451 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 KCNH3Q9ULD8 1083 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 LRRC37A2A6NM11 1700 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 POTEMA6NI47 508 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 DHX15O43143 795 aaKnown RBP29.82■■■□□ 2.36
TMEM248-205ENST00000433271 ATP9AO75110 1047 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 CDC25AP30304 524 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 UBA7P41226 1012 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 PPP2R5CQ13362 524 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 ENGASEQ8NFI3 743 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 TEKT3Q9BXF9 490 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 CCSER1Q9C0I3 900 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 SYNGAP1Q96PV0 1343 aa29.82■■■□□ 2.36
TMEM248-205ENST00000433271 PP2D1A8MPX8 630 aa29.81■■■□□ 2.36
TMEM248-205ENST00000433271 TGFB3P10600 412 aa29.81■■■□□ 2.36
TMEM248-205ENST00000433271 TXLNAP40222 546 aa29.81■■■□□ 2.36
TMEM248-205ENST00000433271 SNW1Q13573 536 aaKnown RBP29.81■■■□□ 2.36
TMEM248-205ENST00000433271 EEPD1Q7L9B9 569 aa29.81■■■□□ 2.36
TMEM248-205ENST00000433271 FMR1NBQ8N0W7 255 aaPredicted RBP29.81■■■□□ 2.36
TMEM248-205ENST00000433271 APBA2Q99767 749 aa29.81■■■□□ 2.36
TMEM248-205ENST00000433271 BEGAINQ9BUH8 593 aa29.81■■■□□ 2.36
TMEM248-205ENST00000433271 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.81■■■□□ 2.36
TMEM248-205ENST00000433271 PKD2L1Q9P0L9 805 aa29.81■■■□□ 2.36
TMEM248-205ENST00000433271 PCNTO95613 3336 aa29.8■■■□□ 2.36
TMEM248-205ENST00000433271 NR1I2O75469 434 aa29.8■■■□□ 2.36
TMEM248-205ENST00000433271 KCNA2P16389 499 aa29.8■■■□□ 2.36
TMEM248-205ENST00000433271 CYP2B6P20813 491 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms