RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 C12orf10Q9HB07 376 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 PANK4Q9NVE7 773 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 PAG1Q9NWQ8 432 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 IL1RAPL1Q9NZN1 696 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.91□□□□□ -0.5
CCDC171-202ENST00000432954 RASAL2Q9UJF2 1139 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 ZBTB1Q9Y2K1 713 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 NR2E3Q9Y5X4 410 aa11.91□□□□□ -0.5
CCDC171-202ENST00000432954 NRXN1Q9ULB1 1477 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 PAHP00439 452 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 KRT4P19013 534 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 SERPINB6P35237 376 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 CHKAP35790 457 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 THOP1P52888 689 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 C6orf183Q5T699 404 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 NDUFAF5Q5TEU4 345 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 OTUD7BQ6GQQ9 843 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 CCDC62Q6P9F0 684 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 NT5DC4Q86YG4 428 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 CARNMT1Q8N4J0 409 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 PEX13Q92968 403 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 ANKRD36BP1Q96IX9 119 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 FHDC1Q9C0D6 1143 aaPredicted RBP11.9□□□□□ -0.5
CCDC171-202ENST00000432954 KCTD5Q9NXV2 234 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 DDX19BQ9UMR2 479 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 ARHGAP35Q9NRY4 1499 aa11.9□□□□□ -0.5
CCDC171-202ENST00000432954 EIF4G3O43432 1585 aaKnown RBP11.9□□□□□ -0.5
CCDC171-202ENST00000432954 FHOD3Q2V2M9 1422 aa11.9□□□□□ -0.51
CCDC171-202ENST00000432954 C5orf60A6NFR6 353 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 GOLGA8CPA6NN73 597 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 H0YC42 278 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 IDH3BO43837 385 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 ASMTLO95671 621 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 DDX5P17844 614 aaKnown RBP11.89□□□□□ -0.51
CCDC171-202ENST00000432954 PSMA3P25788 255 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 PCK1P35558 622 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 TPD52P55327 224 aaPredicted RBP11.89□□□□□ -0.51
CCDC171-202ENST00000432954 CEBPZQ03701 1054 aaKnown RBP11.89□□□□□ -0.51
CCDC171-202ENST00000432954 NIPAL4Q0D2K0 466 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 MRPL28Q13084 256 aaKnown RBP11.89□□□□□ -0.51
CCDC171-202ENST00000432954 SH3D19Q5HYK7 790 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 CCDC81Q6ZN84 652 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 LSMEM1Q8N8F7 131 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 CCDC127Q96BQ5 260 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 GBP5Q96PP8 586 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 RIMKLBQ9ULI2 386 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 ZNF711Q9Y462 761 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 NUP160Q12769 1436 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 AKR1B15C9JRZ8 316 aaPredicted RBP11.89□□□□□ -0.51
CCDC171-202ENST00000432954 FIBPO43427 364 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 PFKFB2O60825 505 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 RAB15P59190 212 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 PIP4K2BP78356 416 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 ACAP1Q15027 740 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 INSCQ1MX18 579 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 PHLDB3Q6NSJ2 640 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 TMEM214Q6NUQ4 689 aaKnown RBP11.89□□□□□ -0.51
CCDC171-202ENST00000432954 SNX32Q86XE0 403 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 RHOT2Q8IXI1 618 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 PAF1Q8N7H5 531 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 PPFIBP2Q8ND30 876 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 SLF1Q9BQI6 1058 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 CCSER1Q9C0I3 900 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 KMT5AQ9NQR1 393 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 PPP1R1BQ9UD71 204 aaPredicted RBP11.89□□□□□ -0.51
CCDC171-202ENST00000432954 SFMBT1Q9UHJ3 866 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 PPP1R9AQ9ULJ8 1098 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 TTF2Q9UNY4 1162 aaKnown RBP11.89□□□□□ -0.51
CCDC171-202ENST00000432954 PLEKHG1Q9ULL1 1385 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 SBNO2Q9Y2G9 1366 aa11.89□□□□□ -0.51
CCDC171-202ENST00000432954 MAGI1Q96QZ7 1491 aaPredicted RBP11.89□□□□□ -0.51
CCDC171-202ENST00000432954 ITSN2Q9NZM3 1697 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 NMT2O60551 498 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 ALAS1P13196 640 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 TUBA3EQ6PEY2 450 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 UNC5DQ6UXZ4 953 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 CCDC83Q8IWF9 413 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 FAM136AQ96C01 138 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 MPHOSPH9Q99550 1183 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 CYLDQ9NQC7 956 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.88□□□□□ -0.51
CCDC171-202ENST00000432954 SLC12A4Q9UP95 1085 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 PPP2R2CQ9Y2T4 447 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 BCL9O00512 1426 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 RGS12O14924 1447 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 NOTOA8MTQ0 251 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 CETN3O15182 167 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 RNASEH2AO75792 299 aaKnown RBP11.88□□□□□ -0.51
CCDC171-202ENST00000432954 F13A1P00488 732 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 TMED10P49755 219 aaKnown RBP11.88□□□□□ -0.51
CCDC171-202ENST00000432954 AP3M2P53677 418 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 TRIM68Q6AZZ1 485 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 PPP4R3AQ6IN85 833 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 SCG3Q8WXD2 468 aaKnown RBP11.88□□□□□ -0.51
CCDC171-202ENST00000432954 ETNK2Q9NVF9 386 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 BTBD7Q9P203 1132 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 HERC5Q9UII4 1024 aaKnown RBP11.88□□□□□ -0.51
CCDC171-202ENST00000432954 DSEQ9UL01 958 aa11.88□□□□□ -0.51
CCDC171-202ENST00000432954 CBFA2T3O75081 653 aa11.87□□□□□ -0.51
CCDC171-202ENST00000432954 RHOXF2BP0C7M4 288 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms