RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
CCDC171-202ENST00000432954 MYT1Q01538 1121 aa20.11■□□□□ 0.81
CCDC171-202ENST00000432954 TTBK1Q5TCY1 1321 aaPredicted RBP19.51■□□□□ 0.71
CCDC171-202ENST00000432954 PRKCSHP14314 528 aaPredicted RBP18.81■□□□□ 0.6
CCDC171-202ENST00000432954 SLC24A1O60721 1099 aa18.75■□□□□ 0.59
CCDC171-202ENST00000432954 APLP2Q06481 763 aa18.59■□□□□ 0.57
CCDC171-202ENST00000432954 ERICH6Q7L0X2 663 aa18.58■□□□□ 0.56
CCDC171-202ENST00000432954 HRCP23327 699 aa18.21■□□□□ 0.51
CCDC171-202ENST00000432954 BCL11AQ9H165 835 aa18.14■□□□□ 0.49
CCDC171-202ENST00000432954 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
CCDC171-202ENST00000432954 DAXXQ9UER7 740 aaPredicted RBP17.96■□□□□ 0.47
CCDC171-202ENST00000432954 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
CCDC171-202ENST00000432954 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
CCDC171-202ENST00000432954 CENPBP07199 599 aaPredicted RBP17.52■□□□□ 0.4
CCDC171-202ENST00000432954 EIF5BO60841 1220 aaKnown RBP17.38■□□□□ 0.37
CCDC171-202ENST00000432954 PPARGC1BQ86YN6 1023 aaKnown RBP17.38■□□□□ 0.37
CCDC171-202ENST00000432954 ACIN1Q9UKV3 1341 aaKnown RBP17.15■□□□□ 0.34
CCDC171-202ENST00000432954 NISCHQ9Y2I1 1504 aa17.15■□□□□ 0.34
CCDC171-202ENST00000432954 ANP32EQ9BTT0 268 aa17.13■□□□□ 0.33
CCDC171-202ENST00000432954 UBE2Q2Q8WVN8 375 aa17.01■□□□□ 0.31
CCDC171-202ENST00000432954 GTF3C3Q9Y5Q9 886 aa16.94■□□□□ 0.3
CCDC171-202ENST00000432954 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
CCDC171-202ENST00000432954 PLEKHG5O94827 1062 aa16.85■□□□□ 0.29
CCDC171-202ENST00000432954 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
CCDC171-202ENST00000432954 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
CCDC171-202ENST00000432954 PCGF6Q9BYE7 350 aa16.74■□□□□ 0.27
CCDC171-202ENST00000432954 ANO8Q9HCE9 1232 aaPredicted RBP16.7■□□□□ 0.26
CCDC171-202ENST00000432954 PODXL2Q9NZ53 605 aa16.68■□□□□ 0.26
CCDC171-202ENST00000432954 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
CCDC171-202ENST00000432954 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
CCDC171-202ENST00000432954 PKNOX2Q96KN3 472 aa16.55■□□□□ 0.24
CCDC171-202ENST00000432954 ERICH6BQ5W0A0 696 aa16.4■□□□□ 0.22
CCDC171-202ENST00000432954 ARXQ96QS3 562 aa16.4■□□□□ 0.22
CCDC171-202ENST00000432954 CCDC180Q9P1Z9 1646 aa16.36■□□□□ 0.21
CCDC171-202ENST00000432954 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
CCDC171-202ENST00000432954 RANGAP1P46060 587 aaPredicted RBP16.33■□□□□ 0.2
CCDC171-202ENST00000432954 SALL2Q9Y467 1007 aaPredicted RBP16.29■□□□□ 0.2
CCDC171-202ENST00000432954 MYT1LQ9UL68 1186 aa16.26■□□□□ 0.19
CCDC171-202ENST00000432954 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
CCDC171-202ENST00000432954 NEFLP07196 543 aa16.22■□□□□ 0.19
CCDC171-202ENST00000432954 TSHZ2Q9NRE2 1034 aa16.22■□□□□ 0.19
CCDC171-202ENST00000432954 KLHL34Q8N239 644 aa16.2■□□□□ 0.18
CCDC171-202ENST00000432954 CLSPNQ9HAW4 1339 aa16.17■□□□□ 0.18
CCDC171-202ENST00000432954 PDIA4P13667 645 aaKnown RBP16.13■□□□□ 0.17
CCDC171-202ENST00000432954 CCDC136Q96JN2 1154 aa16.11■□□□□ 0.17
CCDC171-202ENST00000432954 PDE4CQ08493 712 aa16.08■□□□□ 0.16
CCDC171-202ENST00000432954 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
CCDC171-202ENST00000432954 TIMELESSQ9UNS1 1208 aa15.94■□□□□ 0.14
CCDC171-202ENST00000432954 FGD1P98174 961 aa15.94■□□□□ 0.14
CCDC171-202ENST00000432954 DEKP35659 375 aaKnown RBP15.89■□□□□ 0.13
CCDC171-202ENST00000432954 DIEXFQ68CQ4 756 aaKnown RBP15.89■□□□□ 0.13
CCDC171-202ENST00000432954 POTEDQ86YR6 584 aa15.83■□□□□ 0.13
CCDC171-202ENST00000432954 RTN4Q9NQC3 1192 aaKnown RBP15.83■□□□□ 0.13
CCDC171-202ENST00000432954 SUPT16HQ9Y5B9 1047 aaKnown RBP15.83■□□□□ 0.13
CCDC171-202ENST00000432954 TAF7LQ5H9L4 462 aa15.8■□□□□ 0.12
CCDC171-202ENST00000432954 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.8■□□□□ 0.12
CCDC171-202ENST00000432954 GLIPR1L2Q4G1C9 344 aa15.79■□□□□ 0.12
CCDC171-202ENST00000432954 PLPPR3Q6T4P5 718 aa15.78■□□□□ 0.12
CCDC171-202ENST00000432954 AAMPQ13685 434 aa15.77■□□□□ 0.11
CCDC171-202ENST00000432954 BCL11BQ9C0K0 894 aaPredicted RBP15.77■□□□□ 0.11
CCDC171-202ENST00000432954 HOMEZQ8IX15 550 aa15.76■□□□□ 0.11
CCDC171-202ENST00000432954 ZMYND15Q9H091 742 aa15.72■□□□□ 0.11
CCDC171-202ENST00000432954 MSH5O43196 834 aa15.66■□□□□ 0.1
CCDC171-202ENST00000432954 RBM19Q9Y4C8 960 aaKnown RBP15.66■□□□□ 0.1
CCDC171-202ENST00000432954 RBM10P98175 930 aaKnown RBP15.63■□□□□ 0.09
CCDC171-202ENST00000432954 RSPH6AQ9H0K4 717 aa15.62■□□□□ 0.09
CCDC171-202ENST00000432954 A0A0U1RQG5 324 aaPredicted RBP15.61■□□□□ 0.09
CCDC171-202ENST00000432954 FANCIQ9NVI1 1328 aa15.6■□□□□ 0.09
CCDC171-202ENST00000432954 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
CCDC171-202ENST00000432954 TULP1O00294 542 aaPredicted RBP15.57■□□□□ 0.08
CCDC171-202ENST00000432954 YTHDC1Q96MU7 727 aaKnown RBP15.53■□□□□ 0.08
CCDC171-202ENST00000432954 IL27Q8NEV9 243 aa15.52■□□□□ 0.07
CCDC171-202ENST00000432954 VSIG10Q8N0Z9 540 aa15.51■□□□□ 0.07
CCDC171-202ENST00000432954 BRD2P25440 801 aaKnown RBP15.48■□□□□ 0.07
CCDC171-202ENST00000432954 RSPH4AQ5TD94 716 aa15.48■□□□□ 0.07
CCDC171-202ENST00000432954 ZNF326Q5BKZ1 582 aaKnown RBP15.43■□□□□ 0.06
CCDC171-202ENST00000432954 SENP3Q9H4L4 574 aaPredicted RBP15.43■□□□□ 0.06
CCDC171-202ENST00000432954 CHMP4AQ9BY43 222 aa15.42■□□□□ 0.06
CCDC171-202ENST00000432954 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
CCDC171-202ENST00000432954 NPM2Q86SE8 214 aaKnown RBP15.39■□□□□ 0.05
CCDC171-202ENST00000432954 C11orf95C9JLR9 678 aaPredicted RBP15.35■□□□□ 0.05
CCDC171-202ENST00000432954 DHX37Q8IY37 1157 aaKnown RBP15.32■□□□□ 0.04
CCDC171-202ENST00000432954 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
CCDC171-202ENST00000432954 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
CCDC171-202ENST00000432954 PAXIP1Q6ZW49 1069 aaPredicted RBP15.29■□□□□ 0.04
CCDC171-202ENST00000432954 ZNF316A6NFI3 1004 aaPredicted RBP15.28■□□□□ 0.04
CCDC171-202ENST00000432954 CCER1Q8TC90 406 aaPredicted RBP15.27■□□□□ 0.04
CCDC171-202ENST00000432954 MIER1Q8N108 512 aa15.26■□□□□ 0.03
CCDC171-202ENST00000432954 NAP1L5Q96NT1 182 aaPredicted RBP15.25■□□□□ 0.03
CCDC171-202ENST00000432954 LOC105371045A0A1W2PR82 267 aa15.23■□□□□ 0.03
CCDC171-202ENST00000432954 NAP1L2Q9ULW6 460 aaPredicted RBP15.19■□□□□ 0.02
CCDC171-202ENST00000432954 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
CCDC171-202ENST00000432954 C14orf37Q86TY3 774 aa15.17■□□□□ 0.02
CCDC171-202ENST00000432954 HAP1P54257 671 aaPredicted RBP15.15■□□□□ 0.02
CCDC171-202ENST00000432954 FBXO3Q9UK99 471 aa15.14■□□□□ 0.01
CCDC171-202ENST00000432954 RRP9O43818 475 aaKnown RBP15.13■□□□□ 0.01
CCDC171-202ENST00000432954 IPO4Q8TEX9 1081 aaKnown RBP15.12■□□□□ 0.01
CCDC171-202ENST00000432954 BCCIPQ9P287 314 aaKnown RBP eCLIP15.11■□□□□ 0.01
CCDC171-202ENST00000432954 WASHC2CQ9Y4E1 1318 aa15.11■□□□□ 0.01
CCDC171-202ENST00000432954 CDK11AQ9UQ88 783 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms