RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 PITPNM1O00562 1244 aa16.53■□□□□ 0.24
SMARCE1-205ENST00000431889 CKBP12277 381 aa16.53■□□□□ 0.24
SMARCE1-205ENST00000431889 SKIV2LQ15477 1246 aaKnown RBP16.53■□□□□ 0.24
SMARCE1-205ENST00000431889 TJAP1Q5JTD0 557 aa16.53■□□□□ 0.24
SMARCE1-205ENST00000431889 LRRC8DQ7L1W4 858 aa16.53■□□□□ 0.24
SMARCE1-205ENST00000431889 HERC6Q8IVU3 1022 aa16.53■□□□□ 0.24
SMARCE1-205ENST00000431889 NECAB3Q96P71 396 aaPredicted RBP16.53■□□□□ 0.24
SMARCE1-205ENST00000431889 GTF2IRD1Q9UHL9 959 aa16.53■□□□□ 0.24
SMARCE1-205ENST00000431889 GCOM1H8Y6P7 765 aaPredicted RBP16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 SGSM2O43147 1006 aa16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 NBNO60934 754 aa16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 PFKMP08237 780 aa16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 POLR2MP0CAP2 368 aa16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 UBA1P22314 1058 aaKnown RBP16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 SP4Q02446 784 aa16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 PTPN11Q06124 597 aaPredicted RBP16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 MYSM1Q5VVJ2 828 aa16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 NCOA7Q8NI08 942 aa16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 RUFY2Q8WXA3 655 aa16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 RIOX1Q9H6W3 641 aa16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 THEGQ9P2T0 379 aa16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 MTUS1Q9ULD2 1270 aa16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 RBM8AQ9Y5S9 174 aaKnown RBP16.52■□□□□ 0.24
SMARCE1-205ENST00000431889 hCG_1642624A0A1W2PR95 340 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 SELPP16109 830 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 TROAPQ12815 778 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 LAMC2Q13753 1193 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 CELF3Q5SZQ8 465 aaKnown RBP16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 ZNF618Q5T7W0 954 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 VSIG10LQ86VR7 867 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 PPTC7Q8NI37 304 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 OSBPL7Q9BZF2 842 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 COL4A4P53420 1690 aaPredicted RBP16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 TLL1O43897 1013 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 F2P00734 622 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 RFC2P35250 354 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 WDR5P61964 334 aaKnown RBP16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 TAP1Q03518 808 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 IGDCC4Q8TDY8 1250 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 SLC9A7Q96T83 725 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 LRRC2Q9BYS8 371 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 MLXIPQ9HAP2 919 aa16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 PRRC2BQ5JSZ5 2229 aaKnown RBP16.51■□□□□ 0.23
SMARCE1-205ENST00000431889 PNMA6FA0A0J9YX94 578 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 PLEKHA8P1O95397 391 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 CCND2P30279 289 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 KCNJ6P48051 423 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 NT5C2P49902 561 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 MRPS9P82933 396 aaKnown RBP16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 MBTPS1Q14703 1052 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 USP17L6PQ6QN14 398 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 CATIPQ7Z7H3 387 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 SESTD1Q86VW0 696 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 MB21D2Q8IYB1 491 aaPredicted RBP16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 CCDC82Q8N4S0 544 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 AFAP1L1Q8TED9 768 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 ASB2Q96Q27 587 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 LY9Q9HBG7 655 aa16.5■□□□□ 0.23
SMARCE1-205ENST00000431889 HAS3O00219 553 aa16.49■□□□□ 0.23
SMARCE1-205ENST00000431889 KCNQ1P51787 676 aa16.49■□□□□ 0.23
SMARCE1-205ENST00000431889 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.49■□□□□ 0.232e-7■■□□□ 13.5
SMARCE1-205ENST00000431889 TRIM50Q86XT4 487 aa16.49■□□□□ 0.23
SMARCE1-205ENST00000431889 ZNF654Q8IZM8 581 aa16.49■□□□□ 0.23
SMARCE1-205ENST00000431889 CCDC155Q8N6L0 562 aa16.49■□□□□ 0.23
SMARCE1-205ENST00000431889 CAGE1Q8TC20 777 aa16.49■□□□□ 0.23
SMARCE1-205ENST00000431889 ADAMTS19Q8TE59 1207 aa16.49■□□□□ 0.23
SMARCE1-205ENST00000431889 SYMPKQ92797 1274 aaKnown RBP16.49■□□□□ 0.23
SMARCE1-205ENST00000431889 EMID1Q96A84 441 aaPredicted RBP16.49■□□□□ 0.23
SMARCE1-205ENST00000431889 ZBED2Q9BTP6 218 aa16.49■□□□□ 0.23
SMARCE1-205ENST00000431889 MTCH2Q9Y6C9 303 aa16.49■□□□□ 0.23
SMARCE1-205ENST00000431889 PRC1O43663 620 aa16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 THPOP40225 353 aa16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 GHRHRQ02643 423 aa16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 SEMA3FQ13275 785 aa16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 SART3Q15020 963 aaKnown RBP16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 TRIM71Q2Q1W2 868 aaKnown RBP16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 UTP14CQ5TAP6 766 aaKnown RBP16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 TRAF7Q6Q0C0 670 aa16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 CYFIP1Q7L576 1253 aa16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 GDPD5Q8WTR4 605 aa16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 MAP4K1Q92918 833 aa16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 C16orf70Q9BSU1 422 aa16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 KATNAL1Q9BW62 490 aa16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 PKD2L1Q9P0L9 805 aa16.48■□□□□ 0.23
SMARCE1-205ENST00000431889 CTSHP09668 335 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 MRPS5P82675 430 aaKnown RBP16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 NFXL1Q6ZNB6 911 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 ATXN2LQ8WWM7 1075 aaKnown RBP16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 RAPGEFL1Q9UHV5 662 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 KIF28PB7ZC32 967 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 TNFRSF10AO00220 468 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 TREHO43280 583 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 PPFIA4O75335 1185 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 LGALS2P05162 132 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 PTK7Q13308 1070 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 GRB10Q13322 594 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 UBE2SQ16763 222 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 CNKSR3Q6P9H4 555 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 SRBD1Q8N5C6 995 aaKnown RBP16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 SMARCC2Q8TAQ2 1214 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms