RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TXNP10599 105 aaKnown RBP10.57□□□□□ -0.72
PDGFC-202ENST00000422544 RARBP10826 455 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 ITGB5P18084 799 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 ZNF76P36508 570 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 NONOQ15233 471 aaKnown RBP eCLIP10.57□□□□□ -0.72
PDGFC-202ENST00000422544 LY6KQ17RY6 165 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 EARS2Q5JPH6 523 aaKnown RBP10.57□□□□□ -0.72
PDGFC-202ENST00000422544 GJC2Q5T442 439 aaPredicted RBP10.57□□□□□ -0.72
PDGFC-202ENST00000422544 PIK3AP1Q6ZUJ8 805 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 U2AF1L4Q8WU68 220 aaKnown RBP10.57□□□□□ -0.72
PDGFC-202ENST00000422544 SCFD2Q8WU76 684 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 CRYGNQ8WXF5 182 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 TNFRSF25Q93038 417 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 INPP4AQ96PE3 977 aaPredicted RBP10.57□□□□□ -0.72
PDGFC-202ENST00000422544 MXRA8Q9BRK3 442 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 DDX41Q9UJV9 622 aaKnown RBP10.57□□□□□ -0.72
PDGFC-202ENST00000422544 UBIAD1Q9Y5Z9 338 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 MRVI1Q9Y6F6 885 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 FAM86B1E9PN63 330 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 DYNC1LI2O43237 492 aaPredicted RBP10.56□□□□□ -0.72
PDGFC-202ENST00000422544 MSCO60682 206 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 DUSP11O75319 330 aaKnown RBP10.56□□□□□ -0.72
PDGFC-202ENST00000422544 PGK1P00558 417 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 CYP3A4P08684 503 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 FAM86B2P0C5J1 330 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 GJA8P48165 433 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 USP11P51784 963 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 IRX5P78411 483 aaPredicted RBP10.56□□□□□ -0.72
PDGFC-202ENST00000422544 SEMA3FQ13275 785 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 TTLL4Q14679 1199 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 INF2Q27J81 1249 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 GNPTABQ3T906 1256 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 DUSP28Q4G0W2 176 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 CEP55Q53EZ4 464 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 CCDC62Q6P9F0 684 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 NLRX1Q86UT6 975 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 COPS5Q92905 334 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 CRISPLD2Q9H0B8 497 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 JADE2Q9NQC1 790 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 GNEQ9Y223 722 aaKnown RBP10.56□□□□□ -0.72
PDGFC-202ENST00000422544 LCTP09848 1927 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 TTC28Q96AY4 2481 aa10.56□□□□□ -0.72
PDGFC-202ENST00000422544 PLXNA1Q9UIW2 1896 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 KIF28PB7ZC32 967 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 MEIS1O00470 390 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 FIBPO43427 364 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 SORBS3O60504 671 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 ARP10275 920 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 ICAM3P32942 547 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 SP2Q02086 613 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 MTMR1Q13613 665 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 GNL2Q13823 731 aaKnown RBP10.55□□□□□ -0.72
PDGFC-202ENST00000422544 BECN1Q14457 450 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 LETM2Q2VYF4 491 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 PRR16Q569H4 304 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 MCTP1Q6DN14 999 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 KCNV1Q6PIU1 500 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 GPRASP2Q96D09 838 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 UIMC1Q96RL1 719 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 AP5M1Q9H0R1 490 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 FOXP1Q9H334 677 aaPredicted RBP10.55□□□□□ -0.72
PDGFC-202ENST00000422544 BCAS3Q9H6U6 928 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 XPNPEP3Q9NQH7 507 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 KCNH7Q9NS40 1196 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 PKD2L1Q9P0L9 805 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 OGDHLQ9ULD0 1010 aa10.55□□□□□ -0.72
PDGFC-202ENST00000422544 IGLV3-22A0A075B6J6 115 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 MYADML2A6NDP7 307 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 NKRFO15226 690 aaKnown RBP eCLIP10.54□□□□□ -0.72
PDGFC-202ENST00000422544 ATP9AO75110 1047 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 TDP2O95551 362 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 C6orf222P0C671 652 aaPredicted RBP10.54□□□□□ -0.72
PDGFC-202ENST00000422544 TGFB3P10600 412 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 ATP2B1P20020 1258 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 PDCP20941 246 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 SYT1P21579 422 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 U2AF2P26368 475 aaKnown RBP eCLIP10.54□□□□□ -0.72
PDGFC-202ENST00000422544 CIITAP33076 1130 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 GJA9P57773 515 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 NIPA1Q7RTP0 329 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 NEK8Q86SG6 692 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 TLK2Q86UE8 772 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 PLA2G4DQ86XP0 818 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 NOSTRINQ8IVI9 506 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 DHX37Q8IY37 1157 aaKnown RBP10.54□□□□□ -0.72
PDGFC-202ENST00000422544 ARRDC4Q8NCT1 418 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 OR6J1Q8NGC5 347 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 LRCH3Q96II8 777 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 CDHR1Q96JP9 859 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 SPC25Q9HBM1 224 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 Q9Y3F1 56 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 SYNRGQ9UMZ2 1314 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 MCM3APO60318 1980 aa10.54□□□□□ -0.72
PDGFC-202ENST00000422544 REV3LO60673 3130 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 CYP3A7-CYP3A51PA0A087WV96 503 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 VPS37CA5D8V6 355 aaPredicted RBP10.53□□□□□ -0.72
PDGFC-202ENST00000422544 CTAGE5O15320 804 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 MAFGO15525 162 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms