RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 CDH23Q9H251 3354 aa16.34■□□□□ 0.21
LINC01006-202ENST00000418309 PPFIA4O75335 1185 aa16.34■□□□□ 0.21
LINC01006-202ENST00000418309 TGFB3P10600 412 aa16.34■□□□□ 0.21
LINC01006-202ENST00000418309 KIF5BP33176 963 aa16.34■□□□□ 0.21
LINC01006-202ENST00000418309 ZNF654Q8IZM8 581 aa16.34■□□□□ 0.21
LINC01006-202ENST00000418309 AFAP1L1Q8TED9 768 aa16.34■□□□□ 0.21
LINC01006-202ENST00000418309 RRP36Q96EU6 259 aaKnown RBP16.34■□□□□ 0.21
LINC01006-202ENST00000418309 SLC9A7Q96T83 725 aa16.34■□□□□ 0.21
LINC01006-202ENST00000418309 MYL10Q9BUA6 226 aa16.34■□□□□ 0.21
LINC01006-202ENST00000418309 EYSQ5T1H1 3165 aa16.33■□□□□ 0.21
LINC01006-202ENST00000418309 CCDC69A6NI79 296 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 KIF28PB7ZC32 967 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 PRC1O43663 620 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 F2P00734 622 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 SELPP16109 830 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 MCM5P33992 734 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 KCNJ6P48051 423 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 SP2Q02086 613 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 ADGRE1Q14246 886 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 HSDL1Q3SXM5 330 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 LRRC8DQ7L1W4 858 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 PHOSPHO2Q8TCD6 241 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 SYMPKQ92797 1274 aaKnown RBP16.33■□□□□ 0.2
LINC01006-202ENST00000418309 GPKOWQ92917 476 aaPredicted RBP eCLIP16.33■□□□□ 0.2
LINC01006-202ENST00000418309 CUL5Q93034 780 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 MAP3K14Q99558 947 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 LY9Q9HBG7 655 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 PRDM6Q9NQX0 595 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 SEC63Q9UGP8 760 aaKnown RBP16.33■□□□□ 0.2
LINC01006-202ENST00000418309 TANC1Q9C0D5 1861 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 CUL9Q8IWT3 2517 aa16.33■□□□□ 0.2
LINC01006-202ENST00000418309 HAS3O00219 553 aa16.32■□□□□ 0.2
LINC01006-202ENST00000418309 DDAH1O94760 285 aa16.32■□□□□ 0.2
LINC01006-202ENST00000418309 CA3P07451 260 aa16.32■□□□□ 0.2
LINC01006-202ENST00000418309 CKBP12277 381 aa16.32■□□□□ 0.2
LINC01006-202ENST00000418309 UBA1P22314 1058 aaKnown RBP16.32■□□□□ 0.2
LINC01006-202ENST00000418309 GNPTABQ3T906 1256 aa16.32■□□□□ 0.2
LINC01006-202ENST00000418309 TMTC2Q8N394 836 aa16.32■□□□□ 0.2
LINC01006-202ENST00000418309 TET1Q8NFU7 2136 aa16.32■□□□□ 0.2
LINC01006-202ENST00000418309 SMARCC2Q8TAQ2 1214 aa16.32■□□□□ 0.2
LINC01006-202ENST00000418309 DHX38Q92620 1227 aaKnown RBP16.32■□□□□ 0.2
LINC01006-202ENST00000418309 CTAGE1Q96RT6 745 aa16.32■□□□□ 0.2
LINC01006-202ENST00000418309 LSG1Q9H089 658 aaKnown RBP16.32■□□□□ 0.2
LINC01006-202ENST00000418309 RTEL1Q9NZ71 1219 aa16.32■□□□□ 0.2
LINC01006-202ENST00000418309 NOP56O00567 594 aaKnown RBP16.31■□□□□ 0.2
LINC01006-202ENST00000418309 SLC27A2O14975 620 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 BAIAP3O94812 1187 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 PARNO95453 639 aaKnown RBP16.31■□□□□ 0.2
LINC01006-202ENST00000418309 GNAQP50148 359 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 ZNF200P98182 395 aaPredicted RBP16.31■□□□□ 0.2
LINC01006-202ENST00000418309 PTK7Q13308 1070 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 HERC6Q8IVU3 1022 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 MICALL1Q8N3F8 863 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 TMEM87BQ96K49 555 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 LZTS2Q9BRK4 669 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 ESYT1Q9BSJ8 1104 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 MTA3Q9BTC8 594 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 SPZ1Q9BXG8 430 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 CERS4Q9HA82 394 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 ANO2Q9NQ90 1003 aa16.31■□□□□ 0.2
LINC01006-202ENST00000418309 PRUNE2Q8WUY3 3088 aa16.3■□□□□ 0.2
LINC01006-202ENST00000418309 STAM2O75886 525 aa16.3■□□□□ 0.2
LINC01006-202ENST00000418309 HOXD8P13378 290 aaPredicted RBP16.3■□□□□ 0.2
LINC01006-202ENST00000418309 MRPS9P82933 396 aaKnown RBP16.3■□□□□ 0.2
LINC01006-202ENST00000418309 TJAP1Q5JTD0 557 aa16.3■□□□□ 0.2
LINC01006-202ENST00000418309 USP17L6PQ6QN14 398 aa16.3■□□□□ 0.2
LINC01006-202ENST00000418309 ZBED2Q9BTP6 218 aa16.3■□□□□ 0.2
LINC01006-202ENST00000418309 BCAS3Q9H6U6 928 aa16.3■□□□□ 0.2
LINC01006-202ENST00000418309 H3BRB1 525 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 RFXAPO00287 272 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 SH2B2O14492 632 aaPredicted RBP16.29■□□□□ 0.2
LINC01006-202ENST00000418309 TLL1O43897 1013 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 PLEKHA8P1O95397 391 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 CALM1P0DP23 149 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 CALM2P0DP24 149 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 CALM3P0DP25 149 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 RXRAP19793 462 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 SMARCA1P28370 1054 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 RBL2Q08999 1139 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 NEDD9Q14511 834 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 GPNMBQ14956 572 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 ZNF618Q5T7W0 954 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 CREB3L3Q68CJ9 461 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 CNKSR3Q6P9H4 555 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 CYFIP1Q7L576 1253 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 RAB11FIP4Q86YS3 637 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 CMTR1Q8N1G2 835 aaKnown RBP16.29■□□□□ 0.2
LINC01006-202ENST00000418309 CCDC82Q8N4S0 544 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 SRBD1Q8N5C6 995 aaKnown RBP16.29■□□□□ 0.2
LINC01006-202ENST00000418309 C16orf70Q9BSU1 422 aa16.29■□□□□ 0.2
LINC01006-202ENST00000418309 TSPYL2Q9H2G4 693 aaPredicted RBP16.29■□□□□ 0.2
LINC01006-202ENST00000418309 TUT1Q9H6E5 874 aaKnown RBP16.29■□□□□ 0.2
LINC01006-202ENST00000418309 C17orf102A2RUQ5 167 aa16.28■□□□□ 0.2
LINC01006-202ENST00000418309 SPATA31C2B4DYI2 1134 aa16.28■□□□□ 0.2
LINC01006-202ENST00000418309 FIBPO43427 364 aa16.28■□□□□ 0.2
LINC01006-202ENST00000418309 NBNO60934 754 aa16.28■□□□□ 0.2
LINC01006-202ENST00000418309 ICAM3P32942 547 aa16.28■□□□□ 0.2
LINC01006-202ENST00000418309 WDR5P61964 334 aaKnown RBP16.28■□□□□ 0.2
LINC01006-202ENST00000418309 NECTIN1Q15223 517 aa16.28■□□□□ 0.2
LINC01006-202ENST00000418309 ARNTL2Q8WYA1 636 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms