RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 TMEM87BQ96K49 555 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 SPATA33Q96N06 139 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 GAS2L1Q99501 681 aaPredicted RBP17.96■□□□□ 0.47
ACTB-202ENST00000414620 KATNAL1Q9BW62 490 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 SPZ1Q9BXG8 430 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 SEC63Q9UGP8 760 aaKnown RBP17.96■□□□□ 0.47
ACTB-202ENST00000414620 GTF2IRD1Q9UHL9 959 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 EYSQ5T1H1 3165 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 F2P00734 622 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 ACTN1P12814 892 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 ATP2A2P16615 1042 aaKnown RBP17.95■□□□□ 0.46
ACTB-202ENST00000414620 RFC2P35250 354 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 NECTIN1Q15223 517 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 MYSM1Q5VVJ2 828 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 SRBD1Q8N5C6 995 aaKnown RBP17.95■□□□□ 0.46
ACTB-202ENST00000414620 CCDC155Q8N6L0 562 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 SMARCC2Q8TAQ2 1214 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 PPM1EQ8WY54 764 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 MAP3K14Q99558 947 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 COL25A1Q9BXS0 654 aaPredicted RBP17.95■□□□□ 0.46
ACTB-202ENST00000414620 BCAS3Q9H6U6 928 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 SLC28A3Q9HAS3 691 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 RTEL1Q9NZ71 1219 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 FRMPD4Q14CM0 1322 aa17.95■□□□□ 0.46
ACTB-202ENST00000414620 hCG_1642624A0A1W2PR95 340 aa17.94■□□□□ 0.46
ACTB-202ENST00000414620 MRPS9P82933 396 aaKnown RBP17.94■□□□□ 0.46
ACTB-202ENST00000414620 ZNF200P98182 395 aaPredicted RBP17.94■□□□□ 0.46
ACTB-202ENST00000414620 PPP2R2DQ66LE6 453 aa17.94■□□□□ 0.46
ACTB-202ENST00000414620 KCNV1Q6PIU1 500 aa17.94■□□□□ 0.46
ACTB-202ENST00000414620 USP17L6PQ6QN14 398 aa17.94■□□□□ 0.46
ACTB-202ENST00000414620 CENPQQ7L2Z9 268 aaPredicted RBP17.94■□□□□ 0.46
ACTB-202ENST00000414620 CAGE1Q8TC20 777 aa17.94■□□□□ 0.46
ACTB-202ENST00000414620 MLXIPQ9HAP2 919 aa17.94■□□□□ 0.46
ACTB-202ENST00000414620 COL4A4P53420 1690 aaPredicted RBP17.93■□□□□ 0.46
ACTB-202ENST00000414620 MICAL3Q7RTP6 2002 aa17.93■□□□□ 0.46
ACTB-202ENST00000414620 HAS3O00219 553 aa17.93■□□□□ 0.46
ACTB-202ENST00000414620 BMP2KLQ5H9B9 411 aa17.93■□□□□ 0.46
ACTB-202ENST00000414620 LRRC8DQ7L1W4 858 aa17.93■□□□□ 0.46
ACTB-202ENST00000414620 MICU3Q86XE3 530 aa17.93■□□□□ 0.46
ACTB-202ENST00000414620 CCDC82Q8N4S0 544 aa17.93■□□□□ 0.46
ACTB-202ENST00000414620 AFAP1L1Q8TED9 768 aa17.93■□□□□ 0.46
ACTB-202ENST00000414620 CUL5Q93034 780 aa17.93■□□□□ 0.46
ACTB-202ENST00000414620 WNT8BQ93098 351 aa17.93■□□□□ 0.46
ACTB-202ENST00000414620 TCEANC2Q96MN5 208 aa17.93■□□□□ 0.46
ACTB-202ENST00000414620 MTA3Q9BTC8 594 aa17.93■□□□□ 0.46
ACTB-202ENST00000414620 SLC12A7Q9Y666 1083 aa17.93■□□□□ 0.46
ACTB-202ENST00000414620 HOXD8P13378 290 aaPredicted RBP17.92■□□□□ 0.46
ACTB-202ENST00000414620 SELPP16109 830 aa17.92■□□□□ 0.46
ACTB-202ENST00000414620 IGFBP4P22692 258 aa17.92■□□□□ 0.46
ACTB-202ENST00000414620 LIFRP42702 1097 aa17.92■□□□□ 0.46
ACTB-202ENST00000414620 GNAQP50148 359 aa17.92■□□□□ 0.46
ACTB-202ENST00000414620 SEMA3FQ13275 785 aa17.92■□□□□ 0.46
ACTB-202ENST00000414620 ADGRE1Q14246 886 aa17.92■□□□□ 0.46
ACTB-202ENST00000414620 HIC1Q14526 733 aa17.92■□□□□ 0.46
ACTB-202ENST00000414620 GNPTABQ3T906 1256 aa17.92■□□□□ 0.46
ACTB-202ENST00000414620 SLC9A7Q96T83 725 aa17.92■□□□□ 0.46
ACTB-202ENST00000414620 LZTS2Q9BRK4 669 aa17.92■□□□□ 0.46
ACTB-202ENST00000414620 PRDM6Q9NQX0 595 aa17.92■□□□□ 0.46
ACTB-202ENST00000414620 PCDHA11Q9Y5I1 949 aa17.92■□□□□ 0.46
ACTB-202ENST00000414620 NOP56O00567 594 aaKnown RBP17.91■□□□□ 0.46
ACTB-202ENST00000414620 MEIS2O14770 477 aa17.91■□□□□ 0.46
ACTB-202ENST00000414620 PPFIA4O75335 1185 aa17.91■□□□□ 0.46
ACTB-202ENST00000414620 CALM1P0DP23 149 aa17.91■□□□□ 0.46
ACTB-202ENST00000414620 CALM2P0DP24 149 aa17.91■□□□□ 0.46
ACTB-202ENST00000414620 CALM3P0DP25 149 aa17.91■□□□□ 0.46
ACTB-202ENST00000414620 CKBP12277 381 aa17.91■□□□□ 0.46
ACTB-202ENST00000414620 SP4Q02446 784 aa17.91■□□□□ 0.46
ACTB-202ENST00000414620 TMTC2Q8N394 836 aa17.91■□□□□ 0.46
ACTB-202ENST00000414620 C16orf70Q9BSU1 422 aa17.91■□□□□ 0.46
ACTB-202ENST00000414620 CERS4Q9HA82 394 aa17.91■□□□□ 0.46
ACTB-202ENST00000414620 TELO2Q9Y4R8 837 aa17.91■□□□□ 0.46
ACTB-202ENST00000414620 UNC80Q8N2C7 3258 aa17.9■□□□□ 0.46
ACTB-202ENST00000414620 NBNO60934 754 aa17.9■□□□□ 0.46
ACTB-202ENST00000414620 LGALS2P05162 132 aa17.9■□□□□ 0.46
ACTB-202ENST00000414620 CA3P07451 260 aa17.9■□□□□ 0.46
ACTB-202ENST00000414620 TGFB3P10600 412 aa17.9■□□□□ 0.46
ACTB-202ENST00000414620 SMARCA1P28370 1054 aa17.9■□□□□ 0.46
ACTB-202ENST00000414620 GPNMBQ14956 572 aa17.9■□□□□ 0.46
ACTB-202ENST00000414620 CCDC85BQ15834 202 aaPredicted RBP17.9■□□□□ 0.46
ACTB-202ENST00000414620 UBE2SQ16763 222 aa17.9■□□□□ 0.46
ACTB-202ENST00000414620 TMTC3Q6ZXV5 915 aa17.9■□□□□ 0.46
ACTB-202ENST00000414620 CYFIP1Q7L576 1253 aa17.9■□□□□ 0.46
ACTB-202ENST00000414620 TMCO2Q7Z6W1 182 aaPredicted RBP17.9■□□□□ 0.46
ACTB-202ENST00000414620 INPP4AQ96PE3 977 aaPredicted RBP17.9■□□□□ 0.46
ACTB-202ENST00000414620 SIP14410 1827 aa17.9■□□□□ 0.46
ACTB-202ENST00000414620 FIBPO43427 364 aa17.89■□□□□ 0.45
ACTB-202ENST00000414620 STAM2O75886 525 aa17.89■□□□□ 0.45
ACTB-202ENST00000414620 ICAM3P32942 547 aa17.89■□□□□ 0.45
ACTB-202ENST00000414620 PTK7Q13308 1070 aa17.89■□□□□ 0.45
ACTB-202ENST00000414620 TCTN1Q2MV58 587 aa17.89■□□□□ 0.45
ACTB-202ENST00000414620 TRIM71Q2Q1W2 868 aaKnown RBP17.89■□□□□ 0.45
ACTB-202ENST00000414620 ZNF618Q5T7W0 954 aa17.89■□□□□ 0.45
ACTB-202ENST00000414620 RNF20Q5VTR2 975 aa17.89■□□□□ 0.45
ACTB-202ENST00000414620 TRIM50Q86XT4 487 aa17.89■□□□□ 0.45
ACTB-202ENST00000414620 MICALL1Q8N3F8 863 aa17.89■□□□□ 0.45
ACTB-202ENST00000414620 NEK1Q96PY6 1258 aa17.89■□□□□ 0.45
ACTB-202ENST00000414620 SPATA31C2B4DYI2 1134 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 H3BRB1 525 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 RFXAPO00287 272 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 PIK3CDO00329 1044 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms