RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 SSBP05455 408 aaKnown RBP eCLIP16.58■□□□□ 0.24
TTC39A-208ENST00000413473 GGCXP38435 758 aa16.58■□□□□ 0.24
TTC39A-208ENST00000413473 GTF2IP78347 998 aa16.58■□□□□ 0.24
TTC39A-208ENST00000413473 COASYQ13057 564 aa16.58■□□□□ 0.24
TTC39A-208ENST00000413473 CRY2Q49AN0 593 aa16.58■□□□□ 0.24
TTC39A-208ENST00000413473 GOLGA6L1Q8N7Z2 621 aa16.58■□□□□ 0.24
TTC39A-208ENST00000413473 ALS2CR12Q96Q35 445 aa16.58■□□□□ 0.24
TTC39A-208ENST00000413473 NLRC4Q9NPP4 1024 aa16.58■□□□□ 0.24
TTC39A-208ENST00000413473 FKBP3Q00688 224 aaKnown RBP16.57■□□□□ 0.24
TTC39A-208ENST00000413473 RASSF7Q02833 373 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 ZNF543Q08ER8 600 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 ASTE1Q2TB18 679 aaPredicted RBP16.57■□□□□ 0.24
TTC39A-208ENST00000413473 SMARCAL1Q9NZC9 954 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 TBC1D7Q9P0N9 293 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 F8W031 263 aaPredicted RBP16.57■□□□□ 0.24
TTC39A-208ENST00000413473 NCK2O43639 380 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 SLC16A2P36021 539 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 CERKQ8TCT0 537 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 RBM17Q96I25 401 aaKnown RBP16.57■□□□□ 0.24
TTC39A-208ENST00000413473 PANK4Q9NVE7 773 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 EHD2Q9NZN4 543 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 LCMT1Q9UIC8 334 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 PCDHA12Q9UN75 941 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 HYOU1Q9Y4L1 999 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 COL4A3BPQ9Y5P4 624 aa16.57■□□□□ 0.24
TTC39A-208ENST00000413473 PLIN4Q96Q06 1357 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 IGKV6D-41A0A0C4DH26 115 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 AGPSO00116 658 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 PJA2O43164 708 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 TTLL1O95922 423 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 TCP1P17987 556 aaKnown RBP16.56■□□□□ 0.24
TTC39A-208ENST00000413473 CCDC40Q4G0X9 1142 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 FAM26FQ5R3K3 315 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 HGSNATQ68CP4 663 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 FOXR1Q6PIV2 292 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 PROM2Q8N271 834 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 AFAP1L1Q8TED9 768 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 EDEM3Q9BZQ6 932 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 IVLP07476 585 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 SLC1A4P43007 532 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 CLK2P49760 499 aaKnown RBP16.56■□□□□ 0.24
TTC39A-208ENST00000413473 SLC7A5Q01650 507 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 ITIH3Q06033 890 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 ZCWPW2Q504Y3 356 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 TDRD12Q587J7 1177 aaKnown RBP16.56■□□□□ 0.24
TTC39A-208ENST00000413473 ZNF572Q7Z3I7 529 aaPredicted RBP16.56■□□□□ 0.24
TTC39A-208ENST00000413473 AENQ8WTP8 325 aaKnown RBP16.56■□□□□ 0.24
TTC39A-208ENST00000413473 CUL5Q93034 780 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 MTMR8Q96EF0 704 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 FGFBP2Q9BYJ0 223 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 DDX4Q9NQI0 724 aaKnown RBP16.56■□□□□ 0.24
TTC39A-208ENST00000413473 FAM184BQ9ULE4 1060 aa16.56■□□□□ 0.24
TTC39A-208ENST00000413473 BUB1O43683 1085 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 RPS6KA5O75582 802 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 BBOX1O75936 387 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 MRPL12P52815 198 aaKnown RBP16.55■□□□□ 0.24
TTC39A-208ENST00000413473 CCDC181Q5TID7 509 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.55■□□□□ 0.24
TTC39A-208ENST00000413473 KANSL2Q9H9L4 492 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 BMP2KQ9NSY1 1161 aaPredicted RBP16.55■□□□□ 0.24
TTC39A-208ENST00000413473 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.55■□□□□ 0.24
TTC39A-208ENST00000413473 SSU72P8A0A1W2PR75 194 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 USP17L10C9JJH3 530 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 E9PMD0 336 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 NOL4O94818 638 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 SERPINB2P05120 415 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 NAP1L1P55209 391 aaKnown RBP16.55■□□□□ 0.24
TTC39A-208ENST00000413473 MAPK8IP2Q13387 824 aaPredicted RBP16.55■□□□□ 0.24
TTC39A-208ENST00000413473 PPP1R18Q6NYC8 613 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 LRRC31Q6UY01 552 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 TLR10Q9BXR5 811 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 PSTPIP2Q9H939 334 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 PODXL2Q9NZ53 605 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 SERPINB13Q9UIV8 391 aa16.55■□□□□ 0.24
TTC39A-208ENST00000413473 TLR2O60603 784 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 HOXA7P31268 230 aaPredicted RBP16.54■□□□□ 0.24
TTC39A-208ENST00000413473 FAM83BQ5T0W9 1011 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 FOXR2Q6PJQ5 311 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 KCTD1Q719H9 257 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 SND1Q7KZF4 910 aaKnown RBP eCLIP16.54■□□□□ 0.24
TTC39A-208ENST00000413473 NELFCDQ8IXH7 590 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 ZFP91Q96JP5 570 aaPredicted RBP16.54■□□□□ 0.24
TTC39A-208ENST00000413473 NOX5Q96PH1 765 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 KIAA1024Q9UPX6 916 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 RIMBP2O15034 1052 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 CACNB1Q02641 598 aaPredicted RBP16.54■□□□□ 0.24
TTC39A-208ENST00000413473 SEPT2Q15019 361 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 SLC9C1Q4G0N8 1177 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 KLHDC7AQ5VTJ3 777 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 TMC4Q7Z404 712 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 DNAJC5Q9H3Z4 198 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 CEP72Q9P209 647 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 MYH7BA7E2Y1 1941 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 NPHP3-ACAD11A0A0J9YXS1 232 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 GOLGA6BA6NDN3 693 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 PAFAH1B1P43034 410 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 POLR2FP61218 127 aaKnown RBP16.54■□□□□ 0.24
TTC39A-208ENST00000413473 APBA1Q02410 837 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 SFMBT2Q5VUG0 894 aa16.54■□□□□ 0.24
TTC39A-208ENST00000413473 FEZ2Q9UHY8 353 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms