RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 CCDC181Q5TID7 509 aa20.43■□□□□ 0.86
EWSR1-207ENST00000406548 PPP4R3AQ6IN85 833 aa20.43■□□□□ 0.86
EWSR1-207ENST00000406548 FOXR1Q6PIV2 292 aa20.43■□□□□ 0.86
EWSR1-207ENST00000406548 HDAC7Q8WUI4 952 aa20.43■□□□□ 0.86
EWSR1-207ENST00000406548 RPGRQ92834 1020 aaKnown RBP20.43■□□□□ 0.86
EWSR1-207ENST00000406548 GGA1Q9UJY5 639 aa20.43■□□□□ 0.86
EWSR1-207ENST00000406548 GOLGA6BA6NDN3 693 aa20.42■□□□□ 0.86
EWSR1-207ENST00000406548 GFPT1Q06210 699 aaPredicted RBP20.42■□□□□ 0.86
EWSR1-207ENST00000406548 KCNMA1Q12791 1236 aa20.42■□□□□ 0.86
EWSR1-207ENST00000406548 HGSNATQ68CP4 663 aa20.42■□□□□ 0.86
EWSR1-207ENST00000406548 ARHGAP27Q6ZUM4 889 aa20.42■□□□□ 0.86
EWSR1-207ENST00000406548 DMGDHQ9UI17 866 aaKnown RBP20.42■□□□□ 0.86
EWSR1-207ENST00000406548 SALL4Q9UJQ4 1053 aa20.42■□□□□ 0.86
EWSR1-207ENST00000406548 COL4A3BPQ9Y5P4 624 aa20.42■□□□□ 0.86
EWSR1-207ENST00000406548 SEPT2Q15019 361 aa20.42■□□□□ 0.86
EWSR1-207ENST00000406548 ECM1Q16610 540 aa20.42■□□□□ 0.86
EWSR1-207ENST00000406548 CCDC155Q8N6L0 562 aa20.42■□□□□ 0.86
EWSR1-207ENST00000406548 DNAJC19Q96DA6 116 aa20.42■□□□□ 0.86
EWSR1-207ENST00000406548 PSMB7Q99436 277 aa20.42■□□□□ 0.86
EWSR1-207ENST00000406548 GPCPD1Q9NPB8 672 aa20.42■□□□□ 0.86
EWSR1-207ENST00000406548 CXCR5P32302 372 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 SLC1A4P43007 532 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 FKBP3Q00688 224 aaKnown RBP20.41■□□□□ 0.86
EWSR1-207ENST00000406548 UBE2SQ16763 222 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 TDRD12Q587J7 1177 aaKnown RBP20.41■□□□□ 0.86
EWSR1-207ENST00000406548 SND1Q7KZF4 910 aaKnown RBP eCLIP20.41■□□□□ 0.869e-7■□□□□ 10.4
EWSR1-207ENST00000406548 MTMR8Q96EF0 704 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 NOX5Q96PH1 765 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 CEP72Q9P209 647 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 DDX25Q9UHL0 483 aaKnown RBP20.41■□□□□ 0.86
EWSR1-207ENST00000406548 RBAK-RBAKDNI3L0D1 243 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 NCK2O43639 380 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 AKR1B1P15121 316 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 MATR3P43243 847 aaKnown RBP eCLIP20.41■□□□□ 0.86
EWSR1-207ENST00000406548 EIF6P56537 245 aaKnown RBP20.41■□□□□ 0.86
EWSR1-207ENST00000406548 RASSF7Q02833 373 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 CCDC40Q4G0X9 1142 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 TRAPPC3LQ5T215 181 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 ANKRD13CQ8N6S4 541 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 TBC1D22AQ8WUA7 517 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 HINFPQ9BQA5 517 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 SMARCAL1Q9NZC9 954 aa20.41■□□□□ 0.86
EWSR1-207ENST00000406548 THSD7AQ9UPZ6 1657 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 MYH7BA7E2Y1 1941 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 IGKV6D-41A0A0C4DH26 115 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 PNMA6FA0A0J9YX94 578 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 PAFAH1B1P43034 410 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 CLK2P49760 499 aaKnown RBP20.4■□□□□ 0.86
EWSR1-207ENST00000406548 GABPAQ06546 454 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 FAM26FQ5R3K3 315 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 HAUS3Q68CZ6 603 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 PRR5LQ6MZQ0 368 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 RNF10Q8N5U6 811 aaKnown RBP20.4■□□□□ 0.86
EWSR1-207ENST00000406548 HAS1Q92839 578 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 TLR10Q9BXR5 811 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 NUCKS1Q9H1E3 243 aaKnown RBP20.4■□□□□ 0.86
EWSR1-207ENST00000406548 RASSF4Q9H2L5 321 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 JMJD4Q9H9V9 463 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 EHD2Q9NZN4 543 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 LY75O60449 1722 aa20.4■□□□□ 0.86
EWSR1-207ENST00000406548 TRAF5O00463 557 aa20.39■□□□□ 0.86
EWSR1-207ENST00000406548 SLC9C1Q4G0N8 1177 aa20.39■□□□□ 0.86
EWSR1-207ENST00000406548 KLHDC7AQ5VTJ3 777 aa20.39■□□□□ 0.86
EWSR1-207ENST00000406548 DPP8Q6V1X1 898 aaPredicted RBP20.39■□□□□ 0.86
EWSR1-207ENST00000406548 CLEC10AQ8IUN9 316 aa20.39■□□□□ 0.86
EWSR1-207ENST00000406548 FAM76AQ8TAV0 307 aa20.39■□□□□ 0.86
EWSR1-207ENST00000406548 SYN2Q92777 582 aaPredicted RBP20.39■□□□□ 0.86
EWSR1-207ENST00000406548 NLRC4Q9NPP4 1024 aa20.39■□□□□ 0.86
EWSR1-207ENST00000406548 PANK4Q9NVE7 773 aa20.39■□□□□ 0.86
EWSR1-207ENST00000406548 STIM2Q9P246 746 aa20.39■□□□□ 0.86
EWSR1-207ENST00000406548 TSKSQ9UJT2 592 aa20.39■□□□□ 0.86
EWSR1-207ENST00000406548 DAGLAQ9Y4D2 1042 aa20.39■□□□□ 0.86
EWSR1-207ENST00000406548 ARFGEF1Q9Y6D6 1849 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 TRIM66O15016 1216 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 BUB1O43683 1085 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 PPP1R11O60927 126 aaPredicted RBP20.39■□□□□ 0.85
EWSR1-207ENST00000406548 HSPA1LP34931 641 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 EPHB4P54760 987 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 SLC7A5Q01650 507 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 ZNF543Q08ER8 600 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 PICALMQ13492 652 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 SFMBT2Q5VUG0 894 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 C10orf67Q8IYJ2 551 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 ADGRF4Q8IZF3 695 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 CUL5Q93034 780 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 KDM3AQ9Y4C1 1321 aa20.39■□□□□ 0.85
EWSR1-207ENST00000406548 GOLGA6CA6NDK9 693 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 NOL4O94818 638 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 SERPING1P05155 500 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 GOLGA6DP0CG33 693 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 ZFP91Q96JP5 570 aaPredicted RBP20.38■□□□□ 0.85
EWSR1-207ENST00000406548 CEP63Q96MT8 703 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 LSM14BQ9BX40 385 aaKnown RBP20.38■□□□□ 0.85
EWSR1-207ENST00000406548 GOLGA6AQ9NYA3 693 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 MARCH6O60337 910 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 PPFIA4O75335 1185 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 TTLL1O95922 423 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 GCFC2P16383 781 aaKnown RBP20.38■□□□□ 0.85
EWSR1-207ENST00000406548 TNFRSF8P28908 595 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 MRPS25P82663 173 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms