RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CMTR1Q8N1G2 835 aaKnown RBP17.74■□□□□ 0.43
TPM1-207ENST00000403994 ZFP91Q96JP5 570 aaPredicted RBP17.74■□□□□ 0.43
TPM1-207ENST00000403994 INPP4AQ96PE3 977 aaPredicted RBP17.74■□□□□ 0.43
TPM1-207ENST00000403994 NOD1Q9Y239 953 aa17.74■□□□□ 0.43
TPM1-207ENST00000403994 SLC12A7Q9Y666 1083 aa17.74■□□□□ 0.43
TPM1-207ENST00000403994 PIK3CDO00329 1044 aa17.73■□□□□ 0.43
TPM1-207ENST00000403994 PSEN2P49810 448 aa17.73■□□□□ 0.43
TPM1-207ENST00000403994 MRPS9P82933 396 aaKnown RBP17.73■□□□□ 0.43
TPM1-207ENST00000403994 SP2Q02086 613 aa17.73■□□□□ 0.43
TPM1-207ENST00000403994 MFSD10Q14728 455 aa17.73■□□□□ 0.43
TPM1-207ENST00000403994 PTGISQ16647 500 aa17.73■□□□□ 0.43
TPM1-207ENST00000403994 HSDL1Q3SXM5 330 aa17.73■□□□□ 0.43
TPM1-207ENST00000403994 RPUSD2Q8IZ73 545 aaKnown RBP17.73■□□□□ 0.43
TPM1-207ENST00000403994 SPATA33Q96N06 139 aa17.73■□□□□ 0.43
TPM1-207ENST00000403994 KATNAL1Q9BW62 490 aa17.73■□□□□ 0.43
TPM1-207ENST00000403994 ZNF576Q9H609 170 aa17.73■□□□□ 0.43
TPM1-207ENST00000403994 GTF2IRD1Q9UHL9 959 aa17.73■□□□□ 0.43
TPM1-207ENST00000403994 HAS3O00219 553 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 MEIS2O14770 477 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 TGFB3P10600 412 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 FOSL2P15408 326 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 RFC2P35250 354 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 BFSP2Q13515 415 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 GRIN2CQ14957 1233 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 APOA5Q6Q788 366 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 USP17L6PQ6QN14 398 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 DEFB128Q7Z7B8 93 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 RASEFQ8IZ41 740 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 CCDC155Q8N6L0 562 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 MAFAQ8NHW3 353 aaPredicted RBP17.72■□□□□ 0.43
TPM1-207ENST00000403994 SMARCC2Q8TAQ2 1214 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 DHX38Q92620 1227 aaKnown RBP17.72■□□□□ 0.43
TPM1-207ENST00000403994 CNTNAP5Q8WYK1 1306 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 MYO9BQ13459 2157 aa17.72■□□□□ 0.43
TPM1-207ENST00000403994 hCG_1642624A0A1W2PR95 340 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 ZBBXA8MT70 800 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 STAM2O75886 525 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 IQCF3P0C7M6 154 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 SEMA3FQ13275 785 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 RAB30Q15771 203 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 KIAA0753Q2KHM9 967 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 ADCK5Q3MIX3 580 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 GNPTABQ3T906 1256 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 C7orf31Q8N865 590 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 FANCBQ8NB91 859 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 CAGE1Q8TC20 777 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 CUL5Q93034 780 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 TCEANC2Q96MN5 208 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 NEK1Q96PY6 1258 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 ALG1Q9BT22 464 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 HDAC6Q9UBN7 1215 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 SLC4A7Q9Y6M7 1214 aa17.71■□□□□ 0.43
TPM1-207ENST00000403994 ICAM3P32942 547 aa17.7■□□□□ 0.42
TPM1-207ENST00000403994 RBL2Q08999 1139 aa17.7■□□□□ 0.42
TPM1-207ENST00000403994 TSGA10IPQ3SY00 556 aa17.7■□□□□ 0.42
TPM1-207ENST00000403994 PCNX4Q63HM2 1172 aa17.7■□□□□ 0.42
TPM1-207ENST00000403994 RETREG2Q8NC44 543 aa17.7■□□□□ 0.42
TPM1-207ENST00000403994 AFAP1L1Q8TED9 768 aa17.7■□□□□ 0.42
TPM1-207ENST00000403994 CCDC136Q96JN2 1154 aa17.7■□□□□ 0.42
TPM1-207ENST00000403994 BCAS3Q9H6U6 928 aa17.7■□□□□ 0.42
TPM1-207ENST00000403994 YBX2Q9Y2T7 364 aaKnown RBP17.7■□□□□ 0.42
TPM1-207ENST00000403994 FIBPO43427 364 aa17.69■□□□□ 0.42
TPM1-207ENST00000403994 PPFIA4O75335 1185 aa17.69■□□□□ 0.42
TPM1-207ENST00000403994 EXOSC10Q01780 885 aaKnown RBP17.69■□□□□ 0.42
TPM1-207ENST00000403994 CCDC82Q8N4S0 544 aa17.69■□□□□ 0.42
TPM1-207ENST00000403994 C16orf70Q9BSU1 422 aa17.69■□□□□ 0.42
TPM1-207ENST00000403994 NKX2-4Q9H2Z4 354 aa17.69■□□□□ 0.42
TPM1-207ENST00000403994 MLXIPQ9HAP2 919 aa17.69■□□□□ 0.42
TPM1-207ENST00000403994 MSRAQ9UJ68 235 aa17.69■□□□□ 0.42
TPM1-207ENST00000403994 XIRP2A4UGR9 3374 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 SPATA31C2B4DYI2 1134 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 LGALS2P05162 132 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 ACTN1P12814 892 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 SELPP16109 830 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 ATP2A2P16615 1042 aaKnown RBP17.68■□□□□ 0.42
TPM1-207ENST00000403994 RABGGTBP53611 331 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 KRT32Q14532 448 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 UBE2SQ16763 222 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 XRRA1Q6P2D8 792 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 METTL7BQ6UX53 244 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 DHX32Q7L7V1 743 aaKnown RBP17.68■□□□□ 0.42
TPM1-207ENST00000403994 HEATR3Q7Z4Q2 680 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.68■□□□□ 0.42
TPM1-207ENST00000403994 WNT8BQ93098 351 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 PSTPIP2Q9H939 334 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 RBM28Q9NW13 759 aaKnown RBP17.68■□□□□ 0.42
TPM1-207ENST00000403994 RTEL1Q9NZ71 1219 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 BRPF3Q9ULD4 1205 aa17.68■□□□□ 0.42
TPM1-207ENST00000403994 NOP56O00567 594 aaKnown RBP17.67■□□□□ 0.42
TPM1-207ENST00000403994 NEDD9Q14511 834 aa17.67■□□□□ 0.42
TPM1-207ENST00000403994 HIC1Q14526 733 aa17.67■□□□□ 0.42
TPM1-207ENST00000403994 RTN1Q16799 776 aa17.67■□□□□ 0.42
TPM1-207ENST00000403994 TRIM71Q2Q1W2 868 aaKnown RBP17.67■□□□□ 0.42
TPM1-207ENST00000403994 WWC2Q6AWC2 1192 aa17.67■□□□□ 0.42
TPM1-207ENST00000403994 SYNE3Q6ZMZ3 975 aa17.67■□□□□ 0.42
TPM1-207ENST00000403994 LRRC8DQ7L1W4 858 aa17.67■□□□□ 0.42
TPM1-207ENST00000403994 CYFIP1Q7L576 1253 aa17.67■□□□□ 0.42
TPM1-207ENST00000403994 TTC28Q96AY4 2481 aa17.67■□□□□ 0.42
TPM1-207ENST00000403994 COL4A4P53420 1690 aaPredicted RBP17.67■□□□□ 0.42
TPM1-207ENST00000403994 MICAL3Q7RTP6 2002 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms