RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 CAPN2P17655 700 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 MRE11P49959 708 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 SP3Q02447 781 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 ZP2Q05996 745 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 TCIRG1Q13488 830 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 SLC6A19Q695T7 634 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 UBE2Q1Q7Z7E8 422 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 MRPL41Q8IXM3 137 aaKnown RBP7.33□□□□□ -1.24
AP3S1-202ENST00000395548 MFSD4AQ8N468 514 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 FAM161BQ96MY7 647 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 TMX4Q9H1E5 349 aaPredicted RBP7.33□□□□□ -1.24
AP3S1-202ENST00000395548 LMCD1Q9NZU5 365 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 ADAMTS6Q9UKP5 1117 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 TLR6Q9Y2C9 796 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 RRS1Q15050 365 aaKnown RBP7.32□□□□□ -1.24
AP3S1-202ENST00000395548 OTUD7BQ6GQQ9 843 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 RELL1Q8IUW5 271 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 DNAJC10Q8IXB1 793 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 LRRN4CLQ8ND94 238 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 PHC3Q8NDX5 983 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 RIN3Q8TB24 985 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 XAGE3Q8WTP9 111 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 CDCA5Q96FF9 252 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 CHMP4AQ9BY43 222 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 TJP2Q9UDY2 1190 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 VTI1BQ9UEU0 232 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 ADAM30Q9UKF2 790 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 PTCH2Q9Y6C5 1203 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 KIF24Q5T7B8 1368 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 RAB3GAP2Q9H2M9 1393 aa7.32□□□□□ -1.24
AP3S1-202ENST00000395548 KIF7Q2M1P5 1343 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 MANSC4A6NHS7 340 aaPredicted RBP7.31□□□□□ -1.24
AP3S1-202ENST00000395548 BPNT1O95861 308 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 KIR3DL1P43629 444 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 GJA8P48165 433 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 LMNB2Q03252 620 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 PWP1Q13610 501 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 HSP90AB2PQ58FF8 381 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 OGFOD2Q6N063 350 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 NBPF5PQ86XG9 351 aaPredicted RBP7.31□□□□□ -1.24
AP3S1-202ENST00000395548 MCATQ8IVS2 390 aaKnown RBP7.31□□□□□ -1.24
AP3S1-202ENST00000395548 SUPT20HQ8NEM7 779 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 DPF2Q92785 391 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 SHISA4Q96DD7 197 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 TMEM87BQ96K49 555 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 HSPA12BQ96MM6 686 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 CDX2Q99626 313 aaPredicted RBP7.31□□□□□ -1.24
AP3S1-202ENST00000395548 ZBTB1Q9Y2K1 713 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 COL4A5P29400 1685 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 FLT4P35916 1363 aa7.31□□□□□ -1.24
AP3S1-202ENST00000395548 PRR33A8MZF0 331 aa7.3□□□□□ -1.24
AP3S1-202ENST00000395548 FARP2O94887 1054 aaPredicted RBP7.3□□□□□ -1.24
AP3S1-202ENST00000395548 CBX7O95931 251 aa7.3□□□□□ -1.24
AP3S1-202ENST00000395548 FBLN1P23142 703 aa7.3□□□□□ -1.24
AP3S1-202ENST00000395548 CDKAL1Q5VV42 579 aa7.3□□□□□ -1.24
AP3S1-202ENST00000395548 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
AP3S1-202ENST00000395548 RSRP1Q9BUV0 290 aa7.3□□□□□ -1.24
AP3S1-202ENST00000395548 KRTAP9-9Q9BYP9 154 aa7.3□□□□□ -1.24
AP3S1-202ENST00000395548 KRTAP9-4Q9BYQ2 154 aa7.3□□□□□ -1.24
AP3S1-202ENST00000395548 CAPN6Q9Y6Q1 641 aa7.3□□□□□ -1.24
AP3S1-202ENST00000395548 ANKRD26Q9UPS8 1709 aa7.3□□□□□ -1.24
AP3S1-202ENST00000395548 PKD1L2Q7Z442 2459 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 SNED1Q8TER0 1413 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 UNCXA6NJT0 531 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 UBE2Q2LH0YL09 131 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 STARD3NLO95772 234 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 GJB1P08034 283 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 CANXP27824 592 aaKnown RBP7.29□□□□□ -1.24
AP3S1-202ENST00000395548 ETV3P41162 512 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 EIF5P55010 431 aaKnown RBP7.29□□□□□ -1.24
AP3S1-202ENST00000395548 CAMK2GQ13555 558 aaPredicted RBP7.29□□□□□ -1.24
AP3S1-202ENST00000395548 TBC1D10BQ4KMP7 808 aaPredicted RBP7.29□□□□□ -1.24
AP3S1-202ENST00000395548 THAP5Q7Z6K1 395 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 CDH24Q86UP0 819 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 POU5F2Q8N7G0 328 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 ATXN2LQ8WWM7 1075 aaKnown RBP7.29□□□□□ -1.24
AP3S1-202ENST00000395548 FAM168AQ92567 244 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 UHRF1Q96T88 793 aaPredicted RBP7.29□□□□□ -1.24
AP3S1-202ENST00000395548 LRFN3Q9BTN0 628 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 PRDM7Q9NQW5 492 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 SEMA3GQ9NS98 782 aa7.29□□□□□ -1.24
AP3S1-202ENST00000395548 NCAPD2Q15021 1401 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 TJP1Q07157 1748 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 ST20-MTHFSA0A0A6YYL1 179 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 H3BS24 57 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 RAD17O75943 681 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 GBP2P32456 591 aaPredicted RBP7.28□□□□□ -1.24
AP3S1-202ENST00000395548 NF2P35240 595 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 MTHFSP49914 203 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 PRMT2P55345 433 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 BNC2Q6ZN30 1099 aaPredicted RBP7.28□□□□□ -1.24
AP3S1-202ENST00000395548 SH3TC2Q8TF17 1288 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 TMEM40Q8WWA1 233 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 GATAD2BQ8WXI9 593 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 TMEM74Q96NL1 305 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 DPH2Q9BQC3 489 aaPredicted RBP7.28□□□□□ -1.24
AP3S1-202ENST00000395548 BCL11AQ9H165 835 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 ATP13A1Q9HD20 1204 aa7.28□□□□□ -1.24
AP3S1-202ENST00000395548 GGA3Q9NZ52 723 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms