RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 TRERF1Q96PN7 1200 aa8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 NEK1Q96PY6 1258 aa8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 MMP19Q99542 508 aa8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 MAP3K14Q99558 947 aa8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 UBAC1Q9BSL1 405 aa8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 LRRC2Q9BYS8 371 aa8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 SEMA6BQ9H3T3 888 aa8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 KAT14Q9H8E8 782 aa8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 PRDM5Q9NQX1 630 aaPredicted RBP8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 DDX20Q9UHI6 824 aaKnown RBP8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 BRPF3Q9ULD4 1205 aa8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 ATP11BQ9Y2G3 1177 aa8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 DDX49Q9Y6V7 483 aaKnown RBP8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 MUC3AQ02505 3323 aa8.18□□□□□ -1.1
TRAV12-3-201ENST00000390442 KLRF2D3W0D1 207 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 DNM1LO00429 736 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 ICMTO60725 284 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 PARP1P09874 1014 aaKnown RBP8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 CPA1P15085 419 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 MCM5P33992 734 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 TRDNQ13061 729 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 KCTD2Q14681 263 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 WTAPQ15007 396 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 SHHQ15465 462 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 QRICH1Q2TAL8 776 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 TKFCQ3LXA3 575 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 TMEM67Q5HYA8 995 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 C9orf50Q5SZB4 431 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 CCDC174Q6PII3 467 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 DHX32Q7L7V1 743 aaKnown RBP8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 TAS1R3Q7RTX0 852 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 RALYLQ86SE5 291 aaKnown RBP8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 DPP9Q86TI2 863 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 ZNF654Q8IZM8 581 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 PHTF2Q8N3S3 785 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 MORC4Q8TE76 937 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 TMEM87BQ96K49 555 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 TCEANC2Q96MN5 208 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 TINF2Q9BSI4 451 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 MYL10Q9BUA6 226 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 RNF146Q9NTX7 359 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 CYP39A1Q9NYL5 469 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 COL20A1Q9P218 1284 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 TTC28Q96AY4 2481 aa8.17□□□□□ -1.1
TRAV12-3-201ENST00000390442 KBTBD13C9JR72 458 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 H3BRB1 525 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 CTAGE5O15320 804 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 ALAS1P13196 640 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 SMARCA1P28370 1054 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 EVCP57679 992 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 CDC37Q16543 378 aaPredicted RBP8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 NAALADL2Q58DX5 795 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 TMEM63BQ5T3F8 832 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 SIX5Q8N196 739 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 SRBD1Q8N5C6 995 aaKnown RBP8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 MSL3Q8N5Y2 521 aaKnown RBP8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 TTYH1Q9H313 450 aaPredicted RBP8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 TUT1Q9H6E5 874 aaKnown RBP8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 ACAD9Q9H845 621 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 HOMER2Q9NSB8 354 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 CXXC1Q9P0U4 656 aaPredicted RBP8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 FBXO40Q9UH90 709 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 DCTN4Q9UJW0 460 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 CCPG1Q9ULG6 757 aa8.16□□□□□ -1.1
TRAV12-3-201ENST00000390442 NID2Q14112 1375 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 SYNGAP1Q96PV0 1343 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 DDAH1O94760 285 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 PLEKHA8P1O95397 391 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 F12P00748 615 aaPredicted RBP8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 RXRAP19793 462 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 EDNRBP24530 442 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 CDC27P30260 824 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 RPS6P62753 249 aaKnown RBP8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 NKX3-2P78367 333 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 SMAD3P84022 425 aaKnown RBP8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 BAATQ14032 418 aaPredicted RBP8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 C8orf34Q49A92 452 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 GJC2Q5T442 439 aaPredicted RBP8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 RNF20Q5VTR2 975 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 ANO1Q5XXA6 986 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 CCSAPQ6IQ19 270 aaPredicted RBP8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 APOA5Q6Q788 366 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 CASC1Q6TDU7 716 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 SLC30A10Q6XR72 485 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 GLYCTKQ8IVS8 523 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 CCDC144CPQ8IYA2 1237 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 GPKOWQ92917 476 aaPredicted RBP eCLIP8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 BADQ92934 168 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 PIGSQ96S52 555 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 SPZ1Q9BXG8 430 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 DNAAF2Q9NVR5 837 aaKnown RBP8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 NRBP1Q9UHY1 535 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 VPS9D1Q9Y2B5 631 aa8.15□□□□□ -1.1
TRAV12-3-201ENST00000390442 KIAA1217Q5T5P2 1943 aa8.15□□□□□ -1.11
TRAV12-3-201ENST00000390442 ZBTB5O15062 677 aa8.14□□□□□ -1.11
TRAV12-3-201ENST00000390442 SEPT4O43236 478 aa8.14□□□□□ -1.11
TRAV12-3-201ENST00000390442 ADAMTS4O75173 837 aa8.14□□□□□ -1.11
TRAV12-3-201ENST00000390442 REC8O95072 547 aa8.14□□□□□ -1.11
TRAV12-3-201ENST00000390442 PTGS1P23219 599 aa8.14□□□□□ -1.11
TRAV12-3-201ENST00000390442 RPS6KB1P23443 525 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms