RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 DDX25Q9UHL0 483 aaKnown RBP21.19■□□□□ 0.98
TMEM53-202ENST00000372237 PNMA6FA0A0J9YX94 578 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 TCP1P17987 556 aaKnown RBP21.18■□□□□ 0.98
TMEM53-202ENST00000372237 DPP8Q6V1X1 898 aaPredicted RBP21.18■□□□□ 0.98
TMEM53-202ENST00000372237 AFAP1L1Q8TED9 768 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 OSBPL9Q96SU4 736 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 DAGLAQ9Y4D2 1042 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 HYOU1Q9Y4L1 999 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 FKBP3Q00688 224 aaKnown RBP21.18■□□□□ 0.98
TMEM53-202ENST00000372237 ITIH3Q06033 890 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 COASYQ13057 564 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 ECM1Q16610 540 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 PPP1R18Q6NYC8 613 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 PDXDC1Q6P996 788 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 ADGRF4Q8IZF3 695 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 CCDC155Q8N6L0 562 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 RBM17Q96I25 401 aaKnown RBP21.18■□□□□ 0.98
TMEM53-202ENST00000372237 JMJD4Q9H9V9 463 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 POLLQ9UGP5 575 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 FOCADQ5VW36 1801 aa21.18■□□□□ 0.98
TMEM53-202ENST00000372237 PRPF6O94906 941 aaKnown RBP21.17■□□□□ 0.98
TMEM53-202ENST00000372237 TTLL1O95922 423 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 GFPT1Q06210 699 aaPredicted RBP21.17■□□□□ 0.98
TMEM53-202ENST00000372237 GABPAQ06546 454 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 TDRD12Q587J7 1177 aaKnown RBP21.17■□□□□ 0.98
TMEM53-202ENST00000372237 CCDC181Q5TID7 509 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 NFRKBQ6P4R8 1299 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 FOXR2Q6PJQ5 311 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 SPATA4Q8NEY3 305 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 PSMB7Q99436 277 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 HINFPQ9BQA5 517 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 FAM184BQ9ULE4 1060 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 COL4A3BPQ9Y5P4 624 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 ZC3H4Q9UPT8 1303 aaKnown RBP21.17■□□□□ 0.98
TMEM53-202ENST00000372237 POLRMTO00411 1230 aaKnown RBP21.17■□□□□ 0.98
TMEM53-202ENST00000372237 TRAF5O00463 557 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 GGCXP38435 758 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 ZNF543Q08ER8 600 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 CCDC40Q4G0X9 1142 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 ZNF572Q7Z3I7 529 aaPredicted RBP21.17■□□□□ 0.98
TMEM53-202ENST00000372237 TBC1D16Q8TBP0 767 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 RIN2Q8WYP3 895 aaPredicted RBP21.17■□□□□ 0.98
TMEM53-202ENST00000372237 HAS1Q92839 578 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 CUL5Q93034 780 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 GJA10Q969M2 543 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 DNAJC19Q96DA6 116 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 LRRC1Q9BTT6 524 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 EDEM3Q9BZQ6 932 aa21.17■□□□□ 0.98
TMEM53-202ENST00000372237 SSU72P8A0A1W2PR75 194 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 C6orf229H3BNL8 230 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 PJA2O43164 708 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 RPS6KA5O75582 802 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 CXCR5P32302 372 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 KCNMA1Q12791 1236 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 SEPT2Q15019 361 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 ZNF772Q68DY9 489 aaPredicted RBP21.16■□□□□ 0.98
TMEM53-202ENST00000372237 ANKRD13CQ8N6S4 541 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 NLRC4Q9NPP4 1024 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 BMP2KQ9NSY1 1161 aaPredicted RBP21.16■□□□□ 0.98
TMEM53-202ENST00000372237 PANK4Q9NVE7 773 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 PCDHA12Q9UN75 941 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 IGKV6D-41A0A0C4DH26 115 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 PPP1R11O60927 126 aaPredicted RBP21.16■□□□□ 0.98
TMEM53-202ENST00000372237 SSBP05455 408 aaKnown RBP eCLIP21.16■□□□□ 0.98
TMEM53-202ENST00000372237 MATR3P43243 847 aaKnown RBP eCLIP21.16■□□□□ 0.98
TMEM53-202ENST00000372237 CLK2P49760 499 aaKnown RBP21.16■□□□□ 0.98
TMEM53-202ENST00000372237 GTF2IP78347 998 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 RASSF7Q02833 373 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 FAM26FQ5R3K3 315 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 SALL4Q9UJQ4 1053 aa21.16■□□□□ 0.98
TMEM53-202ENST00000372237 MRPL12P52815 198 aaKnown RBP21.15■□□□□ 0.98
TMEM53-202ENST00000372237 MAPK8IP2Q13387 824 aaPredicted RBP21.15■□□□□ 0.98
TMEM53-202ENST00000372237 EZH2Q15910 746 aaKnown RBP21.15■□□□□ 0.98
TMEM53-202ENST00000372237 ASTE1Q2TB18 679 aaPredicted RBP21.15■□□□□ 0.98
TMEM53-202ENST00000372237 ZCWPW2Q504Y3 356 aa21.15■□□□□ 0.98
TMEM53-202ENST00000372237 AENQ8WTP8 325 aaKnown RBP21.15■□□□□ 0.98
TMEM53-202ENST00000372237 NT5C3AQ9H0P0 336 aa21.15■□□□□ 0.98
TMEM53-202ENST00000372237 PODXL2Q9NZ53 605 aa21.15■□□□□ 0.98
TMEM53-202ENST00000372237 MYH7BA7E2Y1 1941 aa21.15■□□□□ 0.98
TMEM53-202ENST00000372237 NAP1L1P55209 391 aaKnown RBP21.15■□□□□ 0.98
TMEM53-202ENST00000372237 HGSNATQ68CP4 663 aa21.15■□□□□ 0.98
TMEM53-202ENST00000372237 TTBK2Q6IQ55 1244 aa21.15■□□□□ 0.98
TMEM53-202ENST00000372237 HDAC7Q8WUI4 952 aa21.15■□□□□ 0.98
TMEM53-202ENST00000372237 RUBCNQ92622 972 aa21.15■□□□□ 0.98
TMEM53-202ENST00000372237 NOX5Q96PH1 765 aa21.15■□□□□ 0.98
TMEM53-202ENST00000372237 CEP72Q9P209 647 aa21.15■□□□□ 0.98
TMEM53-202ENST00000372237 DMGDHQ9UI17 866 aaKnown RBP21.15■□□□□ 0.98
TMEM53-202ENST00000372237 F8W031 263 aaPredicted RBP21.14■□□□□ 0.97
TMEM53-202ENST00000372237 PLSCR1O15162 318 aa21.14■□□□□ 0.97
TMEM53-202ENST00000372237 BUB1O43683 1085 aa21.14■□□□□ 0.97
TMEM53-202ENST00000372237 BBOX1O75936 387 aa21.14■□□□□ 0.97
TMEM53-202ENST00000372237 HMGB2P26583 209 aaKnown RBP21.14■□□□□ 0.97
TMEM53-202ENST00000372237 SLC1A4P43007 532 aa21.14■□□□□ 0.97
TMEM53-202ENST00000372237 PAFAH1B1P43034 410 aa21.14■□□□□ 0.97
TMEM53-202ENST00000372237 SLC9C1Q4G0N8 1177 aa21.14■□□□□ 0.97
TMEM53-202ENST00000372237 ARHGAP27Q6ZUM4 889 aa21.14■□□□□ 0.97
TMEM53-202ENST00000372237 TSPYL1Q9H0U9 437 aa21.14■□□□□ 0.97
TMEM53-202ENST00000372237 NUCKS1Q9H1E3 243 aaKnown RBP21.14■□□□□ 0.97
TMEM53-202ENST00000372237 TBC1D7Q9P0N9 293 aa21.14■□□□□ 0.97
TMEM53-202ENST00000372237 SERPINB13Q9UIV8 391 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms