RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 HMGN5P82970 282 aaKnown RBP12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 SEPT14Q6ZU15 432 aa12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 FBXO16Q8IX29 292 aaPredicted RBP12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 REXO1Q8N1G1 1221 aaKnown RBP12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 DNERQ8NFT8 737 aa12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 GLT8D2Q9H1C3 349 aa12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 SH3GLB2Q9NR46 395 aa12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 PXMP2Q9NR77 195 aa12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 STK36Q9NRP7 1315 aa12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 MAP3K20Q9NYL2 800 aaKnown RBP12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 RTEL1Q9NZ71 1219 aa12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 PLXNA1Q9UIW2 1896 aa12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 PCDHA6Q9UN73 950 aa12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 PCDHA8Q9Y5H6 950 aa12.24□□□□□ -0.45
EXOSC1-203ENST00000370886 SYNGAP1Q96PV0 1343 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 A0A1W2PQ45 241 aaPredicted RBP12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 A0A1W2PQY0 241 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 DCDC2CA8MYV0 355 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 PIK3CDO00329 1044 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 NR3C2P08235 984 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 PPIGQ13427 754 aaKnown RBP eCLIP12.23□□□□□ -0.459e-6■■□□□ 12.8
EXOSC1-203ENST00000370886 ACVR2BQ13705 512 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 MAMDC4Q6UXC1 1216 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 MSL3Q8N5Y2 521 aaKnown RBP12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 SAMD3Q8N6K7 520 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 IL31RAQ8NI17 732 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 BICD2Q8TD16 824 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 C8orf76Q96K31 380 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 TOX2Q96NM4 488 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 C1QTNF1Q9BXJ1 281 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 ZMYND12Q9H0C1 365 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 TSPYL2Q9H2G4 693 aaPredicted RBP12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 EHMT1Q9H9B1 1298 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 PCDHA4Q9UN74 947 aa12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.23□□□□□ -0.45
EXOSC1-203ENST00000370886 MROH7Q68CQ1 1323 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 GJB2P29033 226 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 CCND2P30279 289 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 HOXD11P31277 338 aaPredicted RBP12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 ZNF76P36508 570 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 GNL2Q13823 731 aaKnown RBP12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 PGM5Q15124 567 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 STXBP2Q15833 593 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 KRT40Q6A162 431 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 ANKRD33Q7Z3H0 272 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 BLIDQ8IZY5 108 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 SNX21Q969T3 373 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 IWS1Q96ST2 819 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 PDCD2LQ9BRP1 358 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 TSEN34Q9BSV6 310 aaKnown RBP12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 ANO3Q9BYT9 981 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 MAF1Q9H063 256 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 ABHD16BQ9H3Z7 469 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 PRDM12Q9H4Q4 367 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 BRMS1Q9HCU9 246 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 STARD7Q9NQZ5 370 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 PDGFCQ9NRA1 345 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 KIF3AQ9Y496 699 aa12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 COL11A1P12107 1806 aaPredicted RBP12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 BAZ2BQ9UIF8 2168 aaKnown RBP12.22□□□□□ -0.45
EXOSC1-203ENST00000370886 PARP14Q460N5 1801 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 ESYT2A0FGR8 921 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 SORBS3O60504 671 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 EIF3JO75822 258 aaKnown RBP12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 PGK1P00558 417 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 TIMP1P01033 207 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 FOSP01100 380 aaPredicted RBP12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 AKR1A1P14550 325 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 GHRHRQ02643 423 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 FAAP100Q0VG06 881 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 SAFBQ15424 915 aaKnown RBP eCLIP12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 RAB30Q15771 203 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 CCDC144BQ3MJ40 725 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 OXER1Q8TDS5 423 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 LENG1Q96BZ8 264 aaPredicted RBP12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 PHF20Q9BVI0 1012 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 PBX4Q9BYU1 374 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 FAM184BQ9ULE4 1060 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 HCN4Q9Y3Q4 1203 aa12.21□□□□□ -0.45
EXOSC1-203ENST00000370886 TCF20Q9UGU0 1960 aaKnown RBP12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 CCDC194A0A1B0GVG4 234 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 MOXD2PA6NHM9 499 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 H3BQV1 296 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 ZNF865P0CJ78 1059 aaPredicted RBP12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 IGFBP4P22692 258 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 PTGS1P23219 599 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 KRT2P35908 639 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 TNFAIP2Q03169 654 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 AP3B2Q13367 1082 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 CUL4AQ13619 759 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 AAK1Q2M2I8 961 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 MCTP1Q6DN14 999 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 GALNT17Q6IS24 598 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 MFSD5Q6N075 450 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 PSRC1Q6PGN9 363 aaPredicted RBP12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 VSIG10LQ86VR7 867 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 UIMC1Q96RL1 719 aa12.2□□□□□ -0.46
EXOSC1-203ENST00000370886 MTIF3Q9H2K0 278 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms