RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 TMEM67Q5HYA8 995 aa15.27■□□□□ 0.04
RPF1-201ENST00000370654 CELF3Q5SZQ8 465 aaKnown RBP15.27■□□□□ 0.04
RPF1-201ENST00000370654 DHX37Q8IY37 1157 aaKnown RBP15.27■□□□□ 0.04
RPF1-201ENST00000370654 NCOA7Q8NI08 942 aa15.27■□□□□ 0.04
RPF1-201ENST00000370654 PPTC7Q8NI37 304 aa15.27■□□□□ 0.04
RPF1-201ENST00000370654 MAP4K1Q92918 833 aa15.27■□□□□ 0.04
RPF1-201ENST00000370654 RBM8AQ9Y5S9 174 aaKnown RBP15.27■□□□□ 0.04
RPF1-201ENST00000370654 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
RPF1-201ENST00000370654 GGPS1O95749 300 aa15.26■□□□□ 0.03
RPF1-201ENST00000370654 F2P00734 622 aa15.26■□□□□ 0.03
RPF1-201ENST00000370654 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
RPF1-201ENST00000370654 CKBP12277 381 aa15.26■□□□□ 0.03
RPF1-201ENST00000370654 UBA1P22314 1058 aaKnown RBP15.26■□□□□ 0.03
RPF1-201ENST00000370654 MRPS9P82933 396 aaKnown RBP15.26■□□□□ 0.03
RPF1-201ENST00000370654 SEMA3FQ13275 785 aa15.26■□□□□ 0.03
RPF1-201ENST00000370654 LAMC2Q13753 1193 aa15.26■□□□□ 0.03
RPF1-201ENST00000370654 MBTPS1Q14703 1052 aa15.26■□□□□ 0.03
RPF1-201ENST00000370654 RUFY2Q8WXA3 655 aa15.26■□□□□ 0.03
RPF1-201ENST00000370654 C16orf70Q9BSU1 422 aa15.26■□□□□ 0.03
RPF1-201ENST00000370654 LY9Q9HBG7 655 aa15.26■□□□□ 0.03
RPF1-201ENST00000370654 REV3LO60673 3130 aa15.26■□□□□ 0.03
RPF1-201ENST00000370654 PNMA6FA0A0J9YX94 578 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 LCHNA4D1U4 455 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 SELPP16109 830 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 DEFB103AP81534 67 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 TAP1Q03518 808 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 TJAP1Q5JTD0 557 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 LRRC8DQ7L1W4 858 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 RALYLQ86SE5 291 aaKnown RBP15.25■□□□□ 0.03
RPF1-201ENST00000370654 HERC6Q8IVU3 1022 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 MICALL1Q8N3F8 863 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 C7orf31Q8N865 590 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 AFAP1L1Q8TED9 768 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 SPATA33Q96N06 139 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 OSBPL7Q9BZF2 842 aa15.25■□□□□ 0.03
RPF1-201ENST00000370654 ACTN1P12814 892 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 WDR5P61964 334 aaKnown RBP15.24■□□□□ 0.03
RPF1-201ENST00000370654 RBL2Q08999 1139 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 ZNF618Q5T7W0 954 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 RAB11FIP4Q86YS3 637 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 CMTR1Q8N1G2 835 aaKnown RBP15.24■□□□□ 0.03
RPF1-201ENST00000370654 CAGE1Q8TC20 777 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 SLC9A7Q96T83 725 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 LSG1Q9H089 658 aaKnown RBP15.24■□□□□ 0.03
RPF1-201ENST00000370654 MAP3K20Q9NYL2 800 aaKnown RBP15.24■□□□□ 0.03
RPF1-201ENST00000370654 RTEL1Q9NZ71 1219 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 DOCK5Q9H7D0 1870 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 ERICH2A1L162 156 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 PLEKHA8P1O95397 391 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 CXCL10P02778 98 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 RXRAP19793 462 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 CCND2P30279 289 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 USP17L6PQ6QN14 398 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 CATIPQ7Z7H3 387 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 ZNF654Q8IZM8 581 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 PHOSPHO2Q8TCD6 241 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 ASB2Q96Q27 587 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 MTCH2Q9Y6C9 303 aa15.24■□□□□ 0.03
RPF1-201ENST00000370654 FRMPD4Q14CM0 1322 aa15.23■□□□□ 0.03
RPF1-201ENST00000370654 TTC28Q96AY4 2481 aa15.23■□□□□ 0.03
RPF1-201ENST00000370654 PRC1O43663 620 aa15.23■□□□□ 0.03
RPF1-201ENST00000370654 PPFIA4O75335 1185 aa15.23■□□□□ 0.03
RPF1-201ENST00000370654 TFF2Q03403 129 aa15.23■□□□□ 0.03
RPF1-201ENST00000370654 PTK7Q13308 1070 aa15.23■□□□□ 0.03
RPF1-201ENST00000370654 SRBD1Q8N5C6 995 aaKnown RBP15.23■□□□□ 0.03
RPF1-201ENST00000370654 ARNTL2Q8WYA1 636 aa15.23■□□□□ 0.03
RPF1-201ENST00000370654 LRRC2Q9BYS8 371 aa15.23■□□□□ 0.03
RPF1-201ENST00000370654 THEGQ9P2T0 379 aa15.23■□□□□ 0.03
RPF1-201ENST00000370654 MUC3AQ02505 3323 aa15.23■□□□□ 0.03
RPF1-201ENST00000370654 PRRC2BQ5JSZ5 2229 aaKnown RBP15.22■□□□□ 0.03
RPF1-201ENST00000370654 hCG_1642624A0A1W2PR95 340 aa15.22■□□□□ 0.03
RPF1-201ENST00000370654 SH2B2O14492 632 aaPredicted RBP15.22■□□□□ 0.03
RPF1-201ENST00000370654 MEIS2O14770 477 aa15.22■□□□□ 0.03
RPF1-201ENST00000370654 SLC27A2O14975 620 aa15.22■□□□□ 0.03
RPF1-201ENST00000370654 LPXNO60711 386 aa15.22■□□□□ 0.03
RPF1-201ENST00000370654 TRIM50Q86XT4 487 aa15.22■□□□□ 0.03
RPF1-201ENST00000370654 SAMD3Q8N6K7 520 aa15.22■□□□□ 0.03
RPF1-201ENST00000370654 CCDC155Q8N6L0 562 aa15.22■□□□□ 0.03
RPF1-201ENST00000370654 ATXN2LQ8WWM7 1075 aaKnown RBP15.22■□□□□ 0.03
RPF1-201ENST00000370654 INPP4AQ96PE3 977 aaPredicted RBP15.22■□□□□ 0.03
RPF1-201ENST00000370654 KATNAL1Q9BW62 490 aa15.22■□□□□ 0.03
RPF1-201ENST00000370654 MLXIPQ9HAP2 919 aa15.22■□□□□ 0.03
RPF1-201ENST00000370654 SPATA31C2B4DYI2 1134 aa15.21■□□□□ 0.02
RPF1-201ENST00000370654 BAIAP3O94812 1187 aa15.21■□□□□ 0.02
RPF1-201ENST00000370654 LGALS2P05162 132 aa15.21■□□□□ 0.02
RPF1-201ENST00000370654 TGFB3P10600 412 aa15.21■□□□□ 0.02
RPF1-201ENST00000370654 ICAM3P32942 547 aa15.21■□□□□ 0.02
RPF1-201ENST00000370654 SART3Q15020 963 aaKnown RBP15.21■□□□□ 0.02
RPF1-201ENST00000370654 CNKSR3Q6P9H4 555 aa15.21■□□□□ 0.02
RPF1-201ENST00000370654 KCNV1Q6PIU1 500 aa15.21■□□□□ 0.02
RPF1-201ENST00000370654 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.21■□□□□ 0.02
RPF1-201ENST00000370654 CYFIP1Q7L576 1253 aa15.21■□□□□ 0.02
RPF1-201ENST00000370654 SYMPKQ92797 1274 aaKnown RBP15.21■□□□□ 0.02
RPF1-201ENST00000370654 NECAB3Q96P71 396 aaPredicted RBP15.21■□□□□ 0.02
RPF1-201ENST00000370654 ESYT1Q9BSJ8 1104 aa15.21■□□□□ 0.02
RPF1-201ENST00000370654 SPZ1Q9BXG8 430 aa15.21■□□□□ 0.02
RPF1-201ENST00000370654 H3BRB1 525 aa15.2■□□□□ 0.02
RPF1-201ENST00000370654 TREHO43280 583 aa15.2■□□□□ 0.02
RPF1-201ENST00000370654 TLL1O43897 1013 aa15.2■□□□□ 0.02
RPF1-201ENST00000370654 DDAH1O94760 285 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms